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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERINC1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
70.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
292.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
193.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
162.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
151.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
132.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
116.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
112.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
96.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
96.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
94.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
94.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
94.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
92.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
89.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
87.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
85.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
84.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
82.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
82.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
79.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
79.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
79.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
78.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
77.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
74.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
74.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
72.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
72.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
69.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
68.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
66.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
66.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
65.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
64.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
64.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
64.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
55.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
54.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
54.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
53.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
52.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
52.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
49.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
48.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
46.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
45.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
44.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
43.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
42.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
41.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
37.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
36.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
35.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
34.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
33.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
28.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
25.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
25.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
24.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
23.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
23.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
22.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERINC1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
139.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
570.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
329.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
318.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
316.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
306.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
304.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
296.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
290.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
284.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
283.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
283.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
279.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
276.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
273.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
273.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
269.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
268.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
266.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
266.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
265.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
263.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
263.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
262.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
261.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
260.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
259.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
259.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
259.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
259.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
259.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
256.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
254.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
252.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
250.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
247.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
246.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
246.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
246.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
242.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
242.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
241.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
240.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
237.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
236.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
234.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
234.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
233.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
232.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
232.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
231.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
231.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
231.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
229.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
229.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
229.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
228.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
227.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
227.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
227.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
225.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
224.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
224.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
222.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
222.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
222.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
222.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
222.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
221.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
221.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
220.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
220.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
219.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
218.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
218.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
217.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
216.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
215.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
214.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
214.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
213.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
212.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
212.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
212.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
211.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
211.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
211.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
211.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
210.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
206.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
206.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
205.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
205.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
205.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
205.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
205.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
205.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
205.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
204.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
204.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
203.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
202.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
202.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
201.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
199.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
198.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
198.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
197.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
197.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
196.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
195.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
195.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
194.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
193.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
193.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
193.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
193.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
192.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
191.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
191.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
190.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
189.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
189.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
189.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
189.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
187.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
187.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
186.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
185.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
185.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
185.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
185.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
184.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
184.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
183.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
183.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
182.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
181.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
181.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
181.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
181.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
181.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
180.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
180.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
180.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
179.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
179.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
179.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
179.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
178.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
178.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
176.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
176.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
176.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
176.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
176.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
176.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
175.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
175.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
174.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
174.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
173.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
172.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
172.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
172.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
172.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
172.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
172.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
170.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
170.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
169.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
168.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
168.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
167.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
167.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
167.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
166.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
166.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
166.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
166.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
166.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
165.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
165.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
164.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
164.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
164.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
164.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
163.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
162.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
162.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
161.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
161.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
161.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
160.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
159.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
159.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
159.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
159.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
158.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
158.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
157.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
157.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
157.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
156.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
156.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
156.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
156.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
155.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
155.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
155.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
155.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
155.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
155.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
154.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
154.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
154.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
153.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
153.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
153.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
153.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
153.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
153.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
152.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
151.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
151.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
150.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
150.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
150.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
149.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
149.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
149.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
149.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
149.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
149.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
148.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
147.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
147.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
147.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
147.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
147.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
146.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
145.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
144.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
144.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
144.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
143.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
140.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
140.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
139.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
138.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
138.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
138.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
138.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
138.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
138.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
137.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
137.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
137.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
137.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
137.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
137.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
137.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
135.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
135.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
135.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
135.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
134.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
134.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
133.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
133.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
133.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
133.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
132.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
131.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
131.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
131.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
129.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
129.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
129.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
129.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
128.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
128.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
128.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
128.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
127.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
127.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
126.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
126.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
126.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
125.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
125.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
124.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
123.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
122.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
122.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
121.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
121.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
120.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
119.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
119.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
119.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
118.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
118.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
118.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
118.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
118.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
118.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
117.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
116.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
114.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
114.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
113.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
113.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
113.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
113.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
113.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
113.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
113.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
112.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
112.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
112.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
111.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
111.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
110.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
110.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
110.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
110.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
110.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
109.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
109.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
109.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
108.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
108.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
108.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
108.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
107.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
107.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
107.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
107.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
107.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
107.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
106.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
106.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
105.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
104.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
104.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
103.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
103.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
103.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
103.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
103.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
103.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
102.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
101.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
101.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
101.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
101.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
101.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
101.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
100.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
100.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
100.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
99.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
98.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
98.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
97.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
97.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
95.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
95.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
95.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
94.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
94.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
94.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
93.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
92.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
92.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
92.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
92.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
92.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
91.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
90.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
90.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
90.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
90.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
90.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
90.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
90.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
89.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
89.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
88.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
88.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
88.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
88.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
87.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
87.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
87.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
86.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
85.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
85.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
85.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
85.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
84.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
84.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
84.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
83.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
81.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
80.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
79.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
79.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
79.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
79.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
78.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
78.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
77.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
77.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
77.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
74.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
74.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
73.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
73.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
73.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
72.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
71.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
71.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
71.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
70.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
69.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
69.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
69.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
68.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
68.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
68.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
67.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
67.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
67.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
66.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
65.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
65.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
65.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
64.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
64.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
64.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
64.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
64.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
63.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
63.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
63.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
62.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
62.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
61.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
60.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
60.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
60.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
59.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
59.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
58.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
57.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
57.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
55.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
55.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
54.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
54.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
53.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
53.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
52.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
52.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
51.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
51.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
50.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
50.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
49.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
48.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
48.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
48.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
48.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
48.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
48.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
47.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
47.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
47.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
46.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
46.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
44.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
43.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
42.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
42.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
42.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
41.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
40.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
39.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
38.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
38.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
38.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
37.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
36.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
36.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
35.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
35.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
34.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
34.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
33.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
32.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
32.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
29.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
29.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
27.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
27.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
26.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
24.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
20.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
18.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
16.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
15.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
12.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
9.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERINC1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
188.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
359.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
353.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
341.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
333.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
324.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
323.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
320.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
314.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
312.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
310.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
309.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
296.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
293.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
287.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
283.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
274.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
274.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
267.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
266.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
265.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
254.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
252.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
251.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
251.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
251.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
247.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
239.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
235.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
234.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
230.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
222.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
216.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
215.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
214.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
211.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
209.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
209.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
204.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
198.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
192.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
191.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
191.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
186.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
184.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
184.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
182.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
181.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
180.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
180.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
178.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
174.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
173.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
173.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
172.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
170.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
164.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
164.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
163.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
161.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
159.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
157.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
155.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
154.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
152.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
152.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
151.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
146.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
140.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
139.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
136.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
136.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
135.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
133.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
132.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
131.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
131.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
127.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
126.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
125.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
122.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
120.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
118.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
118.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
116.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
113.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
113.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
112.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
111.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
110.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
110.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
108.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
99.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
85.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
82.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
71.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
70.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
69.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
69.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
57.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERINC1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
95.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
295.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
288.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
240.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
230.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
224.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
221.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
215.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
214.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
212.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
203.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
196.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
193.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
187.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
183.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
179.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
179.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
178.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
176.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
175.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
172.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
166.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
166.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
165.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
163.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
163.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
160.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
159.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
156.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
155.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
154.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
153.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
152.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
148.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
148.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
148.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
146.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
144.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
144.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
144.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
144.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
143.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
141.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
141.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
140.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
140.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
140.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
138.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
138.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
137.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
137.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
136.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
135.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
134.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
134.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
134.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
134.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
133.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
131.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
131.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
130.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
129.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
129.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
128.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
127.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
126.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
126.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
125.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
124.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
124.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
124.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
124.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
124.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
123.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
123.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
122.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
122.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
122.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
121.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
120.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
119.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
116.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
116.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
115.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
115.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
114.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
114.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
114.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
113.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
113.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
113.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
113.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
112.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
112.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
111.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
110.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
110.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
109.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
108.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
108.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
107.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
107.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
107.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
107.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
107.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
106.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
105.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
104.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
104.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
104.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
104.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
103.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
103.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
103.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
102.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
102.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
102.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
102.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
102.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
101.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
101.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
101.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
101.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
101.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
100.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
100.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
99.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
99.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
98.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
97.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
97.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
96.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
96.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
96.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
96.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
94.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
93.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
93.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
93.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
91.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
90.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
90.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
90.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
89.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
89.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
88.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
88.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
88.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
88.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
87.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
87.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
87.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
86.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
86.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
86.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
85.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
84.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
84.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
84.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
84.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
82.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
82.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
81.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
81.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
80.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
80.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
80.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
80.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
78.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
78.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
78.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
78.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
78.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
77.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
77.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
77.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
76.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
76.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
76.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
73.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
73.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
73.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
73.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
73.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
73.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
73.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
72.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
72.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
71.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
70.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
69.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
68.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
68.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
68.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
67.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
67.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
67.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
66.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
65.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
65.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
64.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
64.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
63.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
63.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
62.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
62.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
61.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
61.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
60.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
60.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
60.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
60.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
60.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
59.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
59.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
59.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
59.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
58.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
58.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
58.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
57.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
57.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
56.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
55.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
54.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
54.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
53.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
52.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
52.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
51.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
51.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
51.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
51.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
50.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
48.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
48.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
46.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
45.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
45.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
45.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
43.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
42.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
42.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
42.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
42.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
41.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
41.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
40.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
39.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
39.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
38.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
38.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
38.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
37.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
37.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
37.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
37.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
36.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
35.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
35.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
35.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
34.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
34.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
33.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
32.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
31.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
29.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
29.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
28.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
27.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
26.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
23.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
19.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0069000003
Tumor
1.1
CPT0078800003
Tumor
1.0
CPT0086820003
Tumor
0.9
CPT0007320003
Tumor
0.9
CPT0086950003
Tumor
0.9
CPT0012280003
Tumor
0.9
CPT0026420001
Normal
0.8
CPT0015730003
Tumor
0.7
CPT0079270003
Tumor
0.7
CPT0010110003
Tumor
0.7
CPT0014450004
Tumor
0.7
CPT0079410003
Tumor
0.7
CPT0065430003
Tumor
0.6
CPT0088970003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0078660003
Tumor
0.6
CPT0025110003
Tumor
0.6
CPT0015810003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0019130003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0001190001
Normal
0.4
CPT0001180009
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0088690003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0025060001
Normal
0.3
CPT0001340003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0026410003
Tumor
0.3
CPT0023360001
Normal
0.3
CPT0086030003
Tumor
0.3
CPT0065450001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0006950001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0078930003
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0001270001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0001510001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0001230001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0078530001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0012370003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0012550003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0020020001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0017850003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0009000003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0081990003
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0012920003
Normal
-0.3
CPT0065690003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0010120001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0066480003
Tumor
-0.4
CPT0006900003
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0023690003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0088550004
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0017450001
Normal
-0.5
CPT0009080003
Normal
-0.5
CPT0077310003
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0019990003
Tumor
-0.5
CPT0018250001
Normal
-0.6
CPT0092290003
Tumor
-0.6
CPT0075560003
Tumor
-0.6
CPT0015910003
Tumor
-0.6
CPT0007860003
Tumor
-0.7
CPT0017410003
Tumor
-0.8
CPT0012900004
Tumor
-0.8
CPT0078510003
Tumor
-0.8
CPT0024680001
Normal
-0.9
CPT0011240003
Tumor
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
