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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TDP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
34.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
32.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
26.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
25.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
22.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
19.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
18.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
18.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
18.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
18.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
18.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
17.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
17.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
16.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
16.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
15.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
15.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
15.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
14.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
14.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
14.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
12.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
12.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
10.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
8.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
7.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TDP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
152.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
117.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
97.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
97.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
96.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
95.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
94.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
91.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
91.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
90.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
90.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
88.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
85.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
84.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
83.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
82.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
81.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
80.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
78.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
78.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
77.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
76.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
75.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
74.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
74.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
73.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
73.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
72.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
72.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
72.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
72.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
71.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
69.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
68.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
68.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
68.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
66.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
66.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
65.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
64.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
64.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
64.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
64.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
64.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
63.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
63.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
63.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
62.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
61.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
61.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
60.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
60.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
60.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
60.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
60.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
60.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
59.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
58.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
58.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
58.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
58.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
57.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
57.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
56.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
56.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
56.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
55.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
55.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
55.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
55.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
54.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
53.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
53.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
53.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
53.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
53.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
53.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
52.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
52.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
52.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
52.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
52.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
52.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
52.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
52.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
52.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
51.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
51.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
51.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
50.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
50.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
50.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
50.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
50.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
50.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
49.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
49.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
49.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
48.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
48.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
48.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
48.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
48.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
47.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
47.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
47.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
47.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
47.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
47.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
46.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
46.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
46.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
46.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
46.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
46.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
46.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
45.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
45.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
45.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
45.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
45.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
45.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
45.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
45.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
45.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
44.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
44.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
44.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
44.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
44.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
44.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
44.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
44.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
44.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
44.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
44.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
44.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
43.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
43.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
43.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
42.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
42.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
42.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
42.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
42.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
42.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
42.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
42.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
42.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
42.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
42.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
42.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
41.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
41.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
41.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
41.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
41.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
41.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
41.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
41.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
41.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
40.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
40.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
40.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
40.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
40.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
40.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
40.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
40.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
40.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
39.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
39.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
39.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
39.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
39.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
39.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
39.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
39.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
39.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
39.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
39.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
38.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
38.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
38.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
38.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
38.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
38.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
38.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
38.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
38.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
38.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
38.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
38.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
38.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
38.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
37.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
37.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
37.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
37.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
37.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
37.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
37.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
37.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
37.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
37.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
36.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
36.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
36.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
36.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
36.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
36.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
36.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
36.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
36.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
36.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
36.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
36.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
36.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
36.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
36.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
36.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
36.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
35.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
35.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
35.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
35.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
35.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
35.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
35.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
35.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
35.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
35.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
35.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
35.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
35.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
35.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
35.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
35.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
35.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
35.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
35.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
35.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
34.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
34.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
34.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
34.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
34.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
34.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
34.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
34.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
34.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
34.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
33.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
33.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
33.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
33.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
33.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
33.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
33.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
33.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
33.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
33.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
33.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
33.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
33.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
33.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
33.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
33.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
32.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
32.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
32.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
32.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
32.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
32.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
32.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
32.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
32.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
32.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
32.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
32.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
32.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
32.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
32.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
31.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
31.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
31.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
31.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
31.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
31.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
31.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
31.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
31.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
31.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
30.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
30.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
30.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
30.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
30.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
30.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
30.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
30.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
30.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
30.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
30.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
30.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
30.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
30.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
30.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
30.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
30.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
29.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
29.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
29.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
29.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
29.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
29.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
29.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
29.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
29.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
29.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
29.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
29.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
28.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
28.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
28.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
28.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
28.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
28.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
28.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
28.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
28.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
27.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
27.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
27.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
27.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
27.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
27.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
27.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
26.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
26.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
26.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
26.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
26.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
26.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
26.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
26.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
26.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
26.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
26.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
26.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
26.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
25.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
25.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
25.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
25.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
24.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
24.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
24.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
24.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
24.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
24.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
24.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
24.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
24.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
24.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
24.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
24.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
24.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
24.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
23.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
23.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
23.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
23.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
23.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
23.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
22.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
22.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
22.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
22.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
22.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
22.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
22.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
21.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
21.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
21.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
21.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
21.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
21.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
21.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
20.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
20.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
20.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
20.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
19.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
19.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
19.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
19.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
19.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
19.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
18.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
18.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
16.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
16.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
14.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
14.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
13.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
12.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
11.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TDP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
108.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
98.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
92.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
77.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
75.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
74.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
74.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
74.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
69.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
69.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
67.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
66.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
66.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
66.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
65.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
65.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
63.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
63.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
62.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
61.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
61.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
61.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
59.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
59.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
59.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
58.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
57.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
57.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
57.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
56.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
56.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
55.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
55.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
55.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
55.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
54.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
53.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
53.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
52.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
52.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
52.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
51.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
51.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
50.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
49.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
48.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
48.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
48.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
47.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
46.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
46.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
45.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
45.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
45.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
44.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
44.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
44.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
44.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
43.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
43.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
43.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
41.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
40.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
39.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
39.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
39.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
39.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
38.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
38.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
37.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
36.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
34.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
31.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
31.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
31.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
31.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
30.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
30.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
25.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
22.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
22.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
22.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TDP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
74.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
65.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
62.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
56.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
55.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
55.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
53.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
52.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
51.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
50.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
50.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
48.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
46.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
45.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
44.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
41.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
41.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
41.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
41.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
41.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
41.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
40.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
39.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
39.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
38.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
36.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
36.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
36.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
36.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
34.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
34.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
34.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
33.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
33.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
33.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
33.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
32.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
32.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
32.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
32.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
32.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
32.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
31.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
31.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
31.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
30.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
30.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
30.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
30.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
30.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
29.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
29.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
29.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
29.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
28.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
28.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
28.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
27.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
27.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
27.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
27.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
27.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
26.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
26.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
26.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
26.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
26.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
26.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
26.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
25.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
25.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
25.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
25.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
25.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
25.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
25.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
25.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
24.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
24.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
24.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
24.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
24.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
24.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
24.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
23.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
23.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
23.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
23.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
23.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
23.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
23.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
23.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
22.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
21.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
21.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
21.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
21.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
21.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
21.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
21.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
21.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
21.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
21.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
21.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
21.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
20.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
20.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
20.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
20.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
20.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
20.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
20.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
19.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
19.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
19.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
19.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
19.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
19.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
19.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
18.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
18.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
18.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
18.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
18.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
18.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
17.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
17.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
17.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
17.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
17.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
17.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
15.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
15.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
14.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
14.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
13.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
13.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
13.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
13.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
13.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
12.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
11.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
10.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
10.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
9.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
9.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
7.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079410003
Tumor
1.1
CPT0081880003
Tumor
0.9
CPT0065930003
Tumor
0.9
CPT0012670003
Tumor
0.8
CPT0015810003
Tumor
0.7
CPT0069160003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0078830003
Tumor
0.5
CPT0075560003
Tumor
0.4
CPT0092740003
Normal
0.4
CPT0001350001
Normal
0.4
CPT0017450001
Normal
0.4
CPT0076350001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0006730001
Normal
0.4
CPT0078530001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0065750003
Tumor
0.4
CPT0014350001
Normal
0.4
CPT0092790003
Tumor
0.3
CPT0087050003
Normal
0.3
CPT0092800003
Normal
0.3
CPT0018250001
Normal
0.3
CPT0063320003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0009080003
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0000890001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0015730003
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0086890003
Normal
0.2
CPT0079000001
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0089480003
Normal
0.2
CPT0012290003
Normal
0.2
CPT0064400001
Normal
0.2
CPT0012280003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0078930003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0079380003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0006950001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0012900004
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0012570003
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0021240003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0092730003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0025050003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0092160003
Tumor
-0.3
CPT0079270003
Tumor
-0.3
CPT0013790003
Normal
-0.3
CPT0025230003
Tumor
-0.3
CPT0001230001
Normal
-0.3
CPT0063630003
Tumor
-0.3
CPT0012180003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0078800003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0086870003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0002350011
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0009000003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0024670003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0075170001
Normal
-0.4
CPT0025350003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0011410003
Tumor
-0.5
CPT0092290003
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0006440003
Tumor
-0.6
CPT0079510001
Normal
-0.6
CPT0069000003
Tumor
-0.6
CPT0084590001
Normal
-0.6
CPT0086950003
Tumor
-0.6
CPT0001270001
Normal
-0.6
CPT0014450004
Tumor
-0.7
CPT0088970003
Tumor
-0.8
CPT0084560003
Tumor
-0.9
CPT0001180009
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.