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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BTN3A3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
19.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
18.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
17.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
17.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
12.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
11.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
11.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
11.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
10.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
9.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
6.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
6.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
5.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
5.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
4.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
4.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
3.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
3.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
3.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
3.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
2.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BTN3A3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
98.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
89.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
83.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
81.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
79.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
79.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
76.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
75.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
72.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
71.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
64.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
64.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
63.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
62.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
62.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
61.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
59.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
58.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
58.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
58.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
57.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
57.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
56.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
56.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
55.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
55.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
52.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
51.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
51.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
51.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
50.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
50.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
50.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
48.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
47.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
47.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
47.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
47.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
46.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
46.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
46.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
45.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
45.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
44.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
44.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
44.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
44.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
44.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
43.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
43.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
43.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
43.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
43.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
43.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
42.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
42.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
42.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
42.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
41.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
41.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
40.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
40.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
40.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
40.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
39.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
39.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
39.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
39.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
39.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
39.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
38.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
38.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
38.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
38.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
38.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
38.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
37.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
37.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
37.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
37.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
37.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
37.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
36.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
36.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
36.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
36.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
35.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
35.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
35.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
35.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
35.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
34.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
34.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
34.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
34.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
34.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
34.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
33.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
33.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
33.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
33.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
33.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
33.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
33.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
33.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
33.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
33.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
33.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
32.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
32.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
32.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
31.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
31.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
31.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
31.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
30.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
30.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
30.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
30.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
30.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
30.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
30.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
30.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
30.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
29.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
29.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
29.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
29.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
29.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
29.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
29.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
29.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
29.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
29.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
28.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
28.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
28.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
28.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
28.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
28.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
28.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
28.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
28.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
28.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
28.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
28.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
28.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
28.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
28.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
27.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
27.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
27.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
27.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
27.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
27.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
27.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
27.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
27.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
27.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
27.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
27.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
26.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
26.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
26.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
26.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
26.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
26.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
26.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
26.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
26.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
25.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
25.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
25.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
25.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
25.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
25.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
25.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
25.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
24.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
24.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
24.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
24.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
24.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
24.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
24.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
24.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
24.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
24.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
24.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
24.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
24.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
23.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
23.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
23.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
23.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
23.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
23.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
23.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
23.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
23.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
22.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
22.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
22.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
22.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
22.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
22.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
22.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
21.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
21.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
21.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
21.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
21.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
21.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
21.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
20.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
20.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
20.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
20.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
20.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
20.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
20.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
20.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
19.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
19.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
19.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
19.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
19.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
19.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
19.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
18.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
18.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
18.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
18.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
18.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
17.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
17.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
17.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
17.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
16.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
16.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
16.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
15.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
15.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
15.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
15.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
14.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
14.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
12.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
11.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
11.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
11.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
11.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
10.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
9.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
8.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
8.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
7.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
7.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
7.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
7.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
6.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
5.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
5.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
5.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
4.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BTN3A3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
78.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
77.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
76.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
76.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
69.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
68.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
68.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
67.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
66.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
66.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
65.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
64.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
61.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
59.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
58.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
57.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
56.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
50.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
50.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
49.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
48.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
46.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
44.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
41.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
40.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
39.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
39.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
39.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
37.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
35.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
34.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
34.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
32.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
30.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
29.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
29.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
28.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
28.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
28.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
27.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
26.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
25.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
24.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
22.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
22.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
21.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
20.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
18.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
17.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
17.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
17.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
13.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
12.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
5.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BTN3A3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
47.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
29.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
28.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
28.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
25.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
22.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
22.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
21.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
20.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
19.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
18.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
17.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
17.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
16.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
15.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
14.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
13.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
13.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
13.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
12.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
12.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
12.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
12.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
11.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
11.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
11.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
10.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
10.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
10.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
10.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
10.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
9.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
9.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
9.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
9.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
9.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
9.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
9.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
8.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
8.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
8.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
8.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
8.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
8.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
8.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
7.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
7.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
7.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
7.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
7.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
7.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
7.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
7.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
6.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
6.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
6.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
6.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
6.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
6.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
6.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
6.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
6.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
6.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
6.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
6.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
6.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
6.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
6.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
5.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
5.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
5.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
5.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
5.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
5.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
5.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
5.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
5.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
5.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
5.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
5.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
5.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
5.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
5.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
4.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
4.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
4.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
4.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
4.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
4.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
4.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
3.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
3.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
3.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
3.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
3.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
2.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
2.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
2.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
1.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
1.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
1.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
1.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086360003
Tumor
1.5
CPT0078990003
Tumor
1.4
CPT0010110003
Tumor
1.4
CPT0001540009
Tumor
1.1
CPT0001260009
Tumor
1.1
CPT0012280003
Tumor
1.1
CPT0025880003
Tumor
1.1
CPT0065810003
Tumor
1.0
CPT0087040003
Tumor
1.0
CPT0009060003
Tumor
0.9
CPT0092160003
Tumor
0.9
CPT0000640003
Tumor
0.9
CPT0007320003
Tumor
0.9
CPT0065430003
Tumor
0.8
CPT0064370003
Tumor
0.8
CPT0078800003
Tumor
0.8
CPT0025050003
Tumor
0.7
CPT0025350003
Tumor
0.6
CPT0020120003
Tumor
0.6
CPT0079480003
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0000870016
Tumor
0.5
CPT0092790003
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0006900003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0001220008
Tumor
0.5
CPT0025230003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0019990003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0078930003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0079410003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0006440003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0089460004
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0013790003
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0023350003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0092740003
Normal
-0.3
CPT0000780007
Tumor
-0.3
CPT0075570001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0077310003
Tumor
-0.3
CPT0006530001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0025290003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0069010001
Normal
-0.4
CPT0075170001
Normal
-0.4
CPT0001270001
Normal
-0.4
CPT0066470004
Tumor
-0.4
CPT0001230001
Normal
-0.4
CPT0025170003
Tumor
-0.4
CPT0012090003
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0000890001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0023360001
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0010120001
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0020130001
Normal
-0.4
CPT0012900004
Tumor
-0.4
CPT0088970003
Tumor
-0.4
CPT0086950003
Tumor
-0.4
CPT0001350001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0014130001
Normal
-0.4
CPT0012640003
Normal
-0.5
CPT0079430001
Normal
-0.5
CPT0065450001
Normal
-0.5
CPT0001550001
Normal
-0.5
CPT0078530001
Normal
-0.5
CPT0014450004
Tumor
-0.5
CPT0025920001
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0089040001
Normal
-0.5
CPT0088570001
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0000660001
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0063640001
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0001190001
Normal
-0.5
CPT0081620001
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0086370003
Normal
-0.6
CPT0066520001
Normal
-0.6
CPT0079300001
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0084590001
Normal
-0.6
CPT0001510001
Normal
-0.6
CPT0077320001
Normal
-0.6
CPT0063330001
Normal
-0.6
CPT0092800003
Normal
-0.6
CPT0006950001
Normal
-0.6
CPT0018250001
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0088500001
Normal
-0.6
CPT0017450001
Normal
-0.6
CPT0001340003
Tumor
-0.7
CPT0023710001
Normal
-0.7
CPT0000790001
Normal
-0.7
CPT0009020003
Normal
-0.7
CPT0078940001
Normal
-0.7
CPT0012920003
Normal
-0.7
CPT0007870001
Normal
-0.7
CPT0079510001
Normal
-0.7
CPT0079180003
Tumor
-0.7
CPT0002370001
Normal
-0.7
CPT0069160003
Tumor
-0.7
CPT0086890003
Normal
-0.8
CPT0019160001
Normal
-0.8
CPT0009080003
Normal
-0.8
CPT0076350001
Normal
-0.8
CPT0088710001
Normal
-0.8
CPT0079000001
Normal
-0.9
CPT0086830003
Normal
-0.9
CPT0006730001
Normal
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
