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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
37.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
33.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
32.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
10.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
9.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
8.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
8.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
7.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
6.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
6.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
6.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
5.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
4.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
2.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
51.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
49.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
37.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
32.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
28.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
28.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
26.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
22.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
20.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
20.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
18.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
18.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
17.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
16.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
16.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
14.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
14.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
14.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
13.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
13.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
13.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
13.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
12.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
12.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
12.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
12.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
12.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
12.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
12.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
11.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
11.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
11.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
11.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
11.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
11.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
11.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
11.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
10.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
10.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
10.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
10.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
10.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
10.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
10.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
10.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
10.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
10.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
10.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
10.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
10.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
10.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
10.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
10.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
10.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
9.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
9.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
9.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
9.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
9.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
9.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
9.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
9.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
9.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
9.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
9.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
9.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
9.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
9.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
8.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
8.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
8.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
8.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
8.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
8.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
8.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
8.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
8.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
8.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
8.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
8.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
8.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
8.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
8.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
8.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
8.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
8.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
8.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
8.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
8.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
8.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
8.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
8.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
7.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
7.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
7.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
7.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
7.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
7.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
7.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
7.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
7.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
7.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
7.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
7.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
7.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
7.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
7.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
7.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
7.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
7.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
7.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
7.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
7.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
7.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
7.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
7.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
7.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
7.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
7.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
7.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
7.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
7.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
6.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
6.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
6.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
6.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
6.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
6.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
6.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
6.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
6.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
6.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
6.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
6.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
6.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
6.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
6.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
6.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
6.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
6.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
6.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
6.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
6.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
6.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
6.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
6.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
5.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
5.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
5.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
5.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
5.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
5.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
5.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
5.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
5.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
5.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
5.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
5.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
5.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
5.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
5.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
5.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
5.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
4.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
4.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
4.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
4.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
4.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
4.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
2.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
2.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOP2 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
40.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
32.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
32.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
31.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
29.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
28.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
19.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
19.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
18.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
18.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
18.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
18.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
17.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
16.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
15.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
14.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
13.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
13.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
13.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
13.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
12.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
11.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
11.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
11.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
10.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
10.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
10.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
10.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
9.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
9.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
9.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
8.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
8.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
7.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
58.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
41.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
34.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
31.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
31.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
28.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
28.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
27.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
27.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
26.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
25.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
25.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
25.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
25.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
24.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
24.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
23.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
23.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
22.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
22.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
22.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
21.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
21.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
21.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
21.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
21.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
21.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
21.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
21.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
20.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
20.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
20.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
20.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
19.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
19.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
18.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
18.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
18.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
18.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
18.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
18.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
18.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
18.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
18.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
17.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
17.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
17.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
17.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
17.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
17.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
16.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
16.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
16.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
16.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
16.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
16.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
16.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
16.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
16.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
16.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
15.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
15.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
15.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
15.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
15.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
14.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
14.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
14.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
14.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
14.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
13.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
13.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
13.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
13.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
12.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
12.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
12.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
12.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
12.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
12.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
12.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
12.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
12.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
11.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
11.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
11.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
10.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
10.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
10.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
10.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
10.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
9.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
9.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
9.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
9.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
9.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
9.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
8.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
8.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
8.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
8.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
8.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
7.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
7.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
6.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
6.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
5.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
5.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
4.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079410003
Tumor
1.1
CPT0012550003
Tumor
1.1
CPT0012180003
Tumor
1.0
CPT0001180009
Tumor
1.0
CPT0017850003
Tumor
0.9
CPT0023350003
Tumor
0.9
CPT0001340003
Tumor
0.9
CPT0065430003
Tumor
0.7
CPT0069160003
Tumor
0.7
CPT0081880003
Tumor
0.7
CPT0015730003
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0086950003
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0025050003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0086870003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0019130003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0011410003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0078930003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0079230003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0069010001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0006530001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0018250001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0020020001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0078660003
Tumor
-0.3
CPT0063330001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0025350003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0006730001
Normal
-0.3
CPT0006630003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0088970003
Tumor
-0.3
CPT0001510001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0017410003
Tumor
-0.3
CPT0065870003
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0001550001
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0079300001
Normal
-0.5
CPT0079270003
Tumor
-0.5
CPT0000640003
Tumor
-0.6
CPT0011240003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
