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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
2314.4
nTPM
GTEx:
2314.4
nTPM
FANTOM5:
2369.8
Scaled Tags Per Million
Pig:
1867.2
nTPM
Mouse:
7794.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2314.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 2314.4
Samples: 105
Max nTPM: 5430.7
Min nTPM: 457.0
Std nTPM: 969.4
Median nTPM:
218_1
71 years, female
5430.7
322_1
76 years, male
4951.5
452_1
88 years, female
4373.4
386_1
76 years, male
4338.8
317_1
60 years, male
4127.1
379_1
60 years, male
4121.0
6_1
73 years, female
4104.2
173_1
67 years, male
4094.4
353_1
82 years, female
3750.1
375_1
74 years, female
3520.0
321_1
62 years, female
3477.3
2_1
77 years, female
3427.4
4_1
88 years, female
3352.4
295_1
61 years, female
3352.0
41_1
94 years, female
3310.8
377_1
82 years, female
3301.7
145_1
84 years, male
3299.7
351_1
91 years, male
3212.9
17_1
71 years, male
3193.3
384_1
83 years, male
3185.6
318_1
68 years, male
3173.7
506_1
65 years, male
3121.3
354_1
81 years, female
3080.6
316_1
62 years, male
3075.7
447_1
81 years, male
3073.8
307_1
66 years, female
3055.0
350_1
84 years, female
3034.2
163_1
78 years, male
2989.3
35_1
74 years, female
2873.6
319_1
81 years, male
2815.7
320_1
89 years, female
2738.5
308_1
70 years, female
2732.4
348_1
84 years, male
2713.9
291_1
76 years, male
2709.8
237_1
82 years, male
2645.0
347_1
72 years, male
2623.6
349_1
83 years, male
2556.0
177_1
74 years, male
2521.8
243_1
75 years, male
2457.7
264_1
73 years, female
2409.9
376_1
75 years, female
2385.9
18_1
88 years, male
2372.7
311_1
78 years, male
2301.1
404_1
82 years, female
2293.1
139_1
64 years, female
2264.3
356_1
87 years, female
2261.0
335_1
73 years, female
2256.9
288_1
66 years, female
2254.3
389_1
86 years, female
2253.9
518_1
75 years, female
2236.1
425_1
59 years, female
2220.8
352_1
62 years, male
2219.7
189_1
76 years, male
2215.4
172_1
72 years, female
2196.7
293_1
68 years, female
2183.4
394_1
75 years, female
2167.8
314_1
67 years, male
2165.1
526_1
61 years, male
2158.2
120_1
70 years, female
2143.6
137_1
83 years, male
2132.8
396_1
62 years, male
2120.9
292_1
71 years, male
2117.0
503_1
68 years, male
2063.2
517_1
88 years, male
1954.0
405_1
91 years, male
1939.8
495_1
57 years, female
1934.5
109_1
81 years, female
1909.5
153_1
70 years, female
1850.7
117_1
61 years, male
1840.9
286_1
68 years, female
1824.9
251_1
78 years, male
1809.8
115_1
83 years, male
1794.2
254_1
77 years, female
1783.4
42_1
85 years, male
1734.4
246_1
77 years, male
1723.2
355_1
70 years, female
1683.0
265_1
87 years, male
1682.1
468_1
89 years, male
1670.5
119_1
70 years, female
1643.7
126_1
63 years, male
1612.4
406_1
79 years, male
1610.1
324_1
76 years, male
1587.2
315_1
62 years, female
1578.1
480_1
63 years, male
1536.3
43_1
64 years, female
1513.5
99_1
64 years, male
1498.7
313_1
79 years, female
1435.4
266_1
85 years, male
1424.2
142_1
61 years, female
1422.7
499_1
55 years, female
1374.6
229_1
69 years, female
1364.7
217_1
76 years, male
1358.3
9_1
66 years, female
1317.9
501_1
88 years, male
1313.1
81_1
67 years, male
1231.6
162_1
79 years, female
1070.1
89_1
63 years, male
953.6
414_1
84 years, female
886.4
466_1
57 years, female
862.6
32_1
67 years, male
818.8
415_1
77 years, female
807.4
149_1
88 years, male
721.4
490_1
67 years, female
600.7
491_1
89 years, female
569.2
413_1
59 years, female
457.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.