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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
2981.6
nTPM
HPA Brain:
1792.8
nTPM
GTEx:
2981.6
nTPM
FANTOM5:
1107.5
Scaled Tags Per Million
Pig:
1565.1
nTPM
Mouse:
3155.8
nTPM
Allen mouse:
36.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1792.8
Sample id
Sample description
nTPM
Amygdala nTPM: 1792.8
2814
Male, age 76, right hemisphere
2150.0
2695
Female, age 67, right hemisphere
1925.5
2514
Male, age 75, right hemisphere
1817.2
1987
Female, age 91, left hemisphere
1570.9
2517
Female, age 94, left hemisphere
1500.5
Basal amygdala nTPM: 1528.1
2609
Male, age 75, right hemisphere
1896.5
2243
Female, age 91, right hemisphere
1659.0
2110
Male, age 80, left hemisphere
1629.3
1955
Male, age 76, both hemispheres
1582.2
2685
Female, age 94, left hemisphere
1381.7
2827
Female, age 67, right hemisphere
1020.0
Central amygdala nTPM: 1732.7
1905
Male, age 76, both hemispheres
1961.3
2826
Female, age 94, left hemisphere
1909.0
2515
Male, age 75, right hemisphere
1828.6
2239
Male, age 80, left hemisphere
1580.5
2701
Female, age 91, right hemisphere
1384.0
Corticomedial amygdala nTPM: 1510.4
2428
Male, age 75, right hemisphere
1878.1
2829
Male, age 80, left hemisphere
1629.5
2242
Female, age 91, right hemisphere
1546.7
2240
Male, age 76, both hemispheres
1488.4
2429
Female, age 94, left hemisphere
1437.3
2535
Female, age 67, right hemisphere
1082.4
Lateral amygdala nTPM: 1527.4
1883
Male, age 76, both hemispheres
1949.0
2534
Female, age 94, left hemisphere
1797.4
2516
Male, age 75, right hemisphere
1763.1
2256
Male, age 80, left hemisphere
1291.3
2255
Female, age 91, right hemisphere
1264.2
2830
Female, age 67, right hemisphere
1099.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2981.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 2981.6
Samples: 152
Max nTPM: 6029.0
Min nTPM: 1588.8
Std nTPM: 715.3
Median nTPM: 2894.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
6029.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
5429.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
5048.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
4819.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
4615.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
4547.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
4382.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
4359.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
4348.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
4195.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
4185.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
4061.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
3939.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
3932.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
3855.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
3717.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
3706.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
3699.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
3697.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
3677.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
3637.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
3597.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
3578.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
3576.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
3574.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
3569.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
3555.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
3552.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
3528.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
3526.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
3522.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
3519.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
3485.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
3442.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
3424.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
3422.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
3351.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
3350.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
3348.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
3331.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
3325.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
3294.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
3287.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
3271.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
3257.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
3222.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
3220.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
3204.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
3200.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
3195.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
3184.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
3159.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
3134.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
3108.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
3101.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
3096.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
3089.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
3064.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
3054.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
3052.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
3041.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
3026.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
3020.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
3004.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
2979.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
2962.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
2958.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
2941.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
2919.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
2910.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
2906.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
2903.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
2901.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
2900.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
2900.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
2895.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
2893.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
2883.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
2880.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
2872.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
2867.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
2852.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
2846.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
2828.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
2813.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
2784.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
2754.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
2741.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
2732.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
2718.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
2712.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
2705.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
2687.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
2670.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
2666.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
2642.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
2641.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
2636.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
2635.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
2613.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
2611.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
2608.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
2607.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
2590.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
2585.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
2580.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
2569.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
2566.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
2560.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
2553.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
2550.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
2543.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
2542.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
2540.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
2525.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
2523.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
2513.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
2512.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
2507.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
2468.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
2457.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
2451.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
2435.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
2426.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
2391.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
2371.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
2353.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
2346.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
2341.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
2326.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
2320.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
2298.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
2295.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
2285.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2250.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
2216.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
2215.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
2214.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
2161.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
2145.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
2105.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
2091.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
2077.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
2064.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
2015.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
2003.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
1884.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
1847.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
1843.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
1790.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
1605.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
1588.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
3155.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 3155.8
Samples: 4
Max nTPM: 3349.6
Min nTPM: 3068.7
Sample A
Male
3349.6
Sample B
Male
3081.5
Sample C
Female
3123.5
Sample D
Female
3068.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.