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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB5B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
120.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
113.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
110.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
105.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
99.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
92.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
90.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
88.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
86.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
85.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
83.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
81.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
76.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
74.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
73.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
72.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
72.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
71.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
71.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
68.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
67.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
63.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
63.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
61.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
60.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
60.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
59.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
58.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
57.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
55.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
54.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
54.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
52.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
52.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
51.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
49.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
48.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
48.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
47.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
47.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
45.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
45.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
44.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
44.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
42.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
40.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
38.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
35.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
35.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
35.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
34.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
33.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
33.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
30.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
29.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
29.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
28.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
23.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB5B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
110.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
104.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
102.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
100.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
99.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
98.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
97.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
95.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
95.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
95.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
94.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
93.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
91.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
89.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
88.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
87.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
87.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
87.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
86.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
86.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
86.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
85.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
85.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
85.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
85.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
84.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
84.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
84.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
84.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
84.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
84.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
83.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
83.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
83.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
82.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
82.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
82.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
82.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
82.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
82.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
82.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
82.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
81.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
81.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
81.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
81.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
81.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
81.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
80.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
80.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
80.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
80.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
80.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
80.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
80.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
80.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
80.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
80.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
79.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
79.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
79.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
79.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
79.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
79.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
79.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
78.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
78.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
78.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
78.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
78.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
78.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
78.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
77.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
77.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
77.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
76.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
76.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
76.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
76.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
76.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
76.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
75.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
75.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
75.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
75.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
75.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
75.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
75.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
75.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
75.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
75.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
74.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
74.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
74.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
74.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
74.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
74.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
74.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
74.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
74.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
74.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
73.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
73.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
73.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
72.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
72.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
72.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
72.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
72.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
72.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
72.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
71.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
71.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
71.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
71.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
71.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
71.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
70.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
70.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
70.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
70.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
70.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
70.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
70.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
70.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
69.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
69.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
69.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
69.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
69.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
69.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
69.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
68.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
68.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
68.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
68.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
68.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
68.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
68.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
68.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
68.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
68.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
68.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
68.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
68.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
68.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
68.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
67.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
67.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
67.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
67.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
67.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
67.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
67.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
67.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
67.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
67.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
67.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
66.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
66.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
66.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
66.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
66.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
66.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
66.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
66.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
66.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
66.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
66.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
66.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
65.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
65.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
65.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
65.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
65.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
65.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
65.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
65.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
65.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
65.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
65.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
65.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
65.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
65.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
65.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
64.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
64.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
64.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
64.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
64.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
64.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
64.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
63.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
63.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
63.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
63.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
63.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
63.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
63.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
63.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
63.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
63.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
63.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
63.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
63.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
62.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
62.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
62.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
62.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
62.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
62.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
62.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
62.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
62.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
61.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
61.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
61.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
61.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
61.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
61.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
61.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
61.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
61.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
61.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
61.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
61.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
61.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
61.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
60.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
60.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
60.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
60.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
60.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
60.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
60.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
60.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
60.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
60.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
59.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
59.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
59.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
59.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
59.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
59.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
59.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
59.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
59.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
58.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
58.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
58.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
58.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
58.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
58.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
58.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
58.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
58.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
58.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
57.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
57.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
57.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
57.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
57.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
57.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
56.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
56.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
56.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
56.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
56.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
55.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
55.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
55.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
55.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
55.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
55.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
55.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
55.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
55.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
55.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
54.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
54.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
54.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
54.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
54.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
53.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
53.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
53.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
53.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
53.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
53.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
53.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
53.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
53.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
53.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
53.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
53.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
53.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
53.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
53.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
52.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
52.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
52.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
52.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
52.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
52.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
52.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
52.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
52.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
51.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
51.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
51.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
51.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
51.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
51.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
51.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
51.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
51.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
51.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
51.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
51.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
50.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
50.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
50.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
50.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
50.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
50.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
50.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
50.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
50.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
50.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
50.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
49.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
49.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
49.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
49.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
49.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
48.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
48.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
48.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
48.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
48.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
48.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
48.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
48.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
48.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
47.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
47.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
47.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
47.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
46.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
46.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
46.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
46.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
46.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
46.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
45.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
45.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
45.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
45.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
45.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
45.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
45.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
44.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
44.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
44.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
43.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
43.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
43.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
43.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
43.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
43.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
43.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
43.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
42.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
42.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
42.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
42.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
42.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
42.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
42.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
41.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
41.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
41.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
41.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
41.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
41.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
41.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
40.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
40.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
40.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
40.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
40.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
39.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
39.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
39.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
39.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
39.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
39.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
39.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
39.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
39.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
38.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
38.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
38.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
38.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
37.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
37.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
37.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
37.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
37.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
37.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
37.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
36.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
36.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
35.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
35.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
35.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
35.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
35.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
35.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
34.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
34.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
34.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
34.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
33.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
33.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
33.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
33.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
33.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
32.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
32.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
32.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
32.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
31.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
31.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
30.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
30.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
30.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
30.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
30.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
30.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
29.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
29.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
29.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
29.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
29.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
29.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
29.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
29.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
29.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
29.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
29.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
28.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
27.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
27.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
27.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
27.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
27.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
26.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
26.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
25.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
25.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
25.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
25.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
24.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
23.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
22.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
22.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
21.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
21.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
20.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
20.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
20.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
18.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
17.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
17.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
17.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
16.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
15.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
14.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
12.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB5B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
108.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
84.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
84.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
83.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
82.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
79.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
76.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
74.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
71.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
70.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
70.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
70.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
68.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
68.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
67.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
66.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
66.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
65.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
65.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
65.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
64.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
63.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
63.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
63.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
63.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
63.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
62.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
62.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
62.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
61.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
61.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
60.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
60.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
60.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
60.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
59.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
58.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
58.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
58.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
57.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
57.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
57.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
56.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
56.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
56.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
56.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
55.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
55.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
55.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
55.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
55.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
55.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
53.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
53.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
53.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
53.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
53.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
52.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
52.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
52.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
52.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
52.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
51.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
51.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
51.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
51.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
50.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
50.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
50.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
49.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
49.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
49.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
49.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
47.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
46.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
46.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
44.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
44.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
44.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
44.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
43.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
43.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
42.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
42.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
42.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
42.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
41.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
40.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
40.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
38.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
35.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
34.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
31.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB5B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
145.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
140.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
133.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
132.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
126.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
125.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
123.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
118.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
115.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
114.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
114.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
105.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
102.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
100.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
100.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
99.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
97.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
93.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
92.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
91.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
91.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
90.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
90.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
89.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
88.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
87.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
87.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
85.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
84.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
84.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
84.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
84.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
83.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
82.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
82.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
80.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
79.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
79.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
79.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
78.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
78.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
78.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
78.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
78.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
77.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
76.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
76.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
76.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
75.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
75.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
74.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
74.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
73.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
73.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
73.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
72.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
72.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
71.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
71.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
71.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
70.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
70.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
70.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
69.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
68.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
68.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
67.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
67.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
66.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
66.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
65.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
65.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
65.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
64.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
63.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
62.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
62.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
62.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
61.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
61.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
61.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
61.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
61.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
61.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
60.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
60.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
60.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
60.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
59.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
59.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
59.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
59.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
59.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
59.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
58.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
57.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
57.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
57.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
57.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
56.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
56.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
56.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
55.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
54.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
54.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
53.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
52.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
52.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
52.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
52.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
51.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
51.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
51.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
51.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
51.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
50.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
50.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
50.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
49.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
49.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
49.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
48.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
48.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
48.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
48.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
48.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
47.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
47.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
47.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
46.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
46.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
46.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
46.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
45.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
45.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
45.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
44.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
44.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
44.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
44.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
44.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
44.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
44.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
44.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
43.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
43.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
43.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
42.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
42.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
42.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
41.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
40.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
40.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
40.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
40.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
39.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
39.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
38.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
38.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
38.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
38.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
37.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
37.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
36.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
36.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
36.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
35.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
35.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
35.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
34.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
34.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
33.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
33.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
32.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
32.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
32.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
32.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
32.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
32.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
32.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
31.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
30.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
30.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
30.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
30.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
29.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
29.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
28.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
26.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
26.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
26.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
26.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
26.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
24.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
24.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
24.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
24.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
23.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
23.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
23.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
22.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
20.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
18.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
18.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
17.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
13.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
9.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
6.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
3.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
2.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
1.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
1.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
0.6
CPT0079180003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0065750003
Tumor
0.4
CPT0089480003
Normal
0.4
CPT0015730003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0023350003
Tumor
0.3
CPT0010170001
Normal
0.3
CPT0025170003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0001190001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0020120003
Tumor
0.3
CPT0092740003
Normal
0.3
CPT0007320003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0086820003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0065450001
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0023710001
Normal
0.2
CPT0002270011
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0006950001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0026420001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0079430001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0012180003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0092160003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0026410003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0001340003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0015910003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0012900004
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0001220008
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0011240003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0012080003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0017850003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0012770003
Normal
-0.3
CPT0069000003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0078800003
Tumor
-0.5
CPT0017410003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
