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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPZ1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
96.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
154.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
152.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
138.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
136.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
133.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
133.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
132.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
129.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
128.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
127.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
127.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
126.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
123.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
121.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
119.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
118.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
118.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
117.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
113.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
112.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
111.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
111.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
111.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
110.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
109.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
108.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
108.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
107.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
107.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
103.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
99.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
95.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
95.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
94.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
90.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
88.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
88.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
88.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
88.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
86.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
83.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
81.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
81.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
80.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
79.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
77.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
75.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
73.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
70.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
69.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
68.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
68.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
67.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
67.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
66.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
63.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
62.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
62.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
62.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
62.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
59.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
57.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
52.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPZ1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
111.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
272.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
271.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
247.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
212.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
201.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
200.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
199.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
194.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
180.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
178.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
177.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
177.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
176.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
175.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
172.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
171.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
170.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
167.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
166.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
163.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
163.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
163.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
162.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
162.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
162.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
162.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
161.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
160.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
159.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
158.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
158.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
158.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
157.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
156.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
156.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
155.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
155.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
154.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
154.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
154.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
153.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
153.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
152.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
152.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
152.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
152.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
152.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
151.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
151.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
150.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
149.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
148.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
147.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
147.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
146.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
146.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
146.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
146.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
146.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
146.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
145.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
145.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
144.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
144.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
143.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
143.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
143.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
143.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
143.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
142.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
141.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
141.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
141.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
141.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
140.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
140.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
140.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
139.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
139.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
139.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
139.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
139.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
139.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
138.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
138.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
138.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
136.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
136.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
135.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
135.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
135.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
135.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
134.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
134.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
134.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
134.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
134.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
133.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
133.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
133.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
132.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
132.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
132.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
132.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
131.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
131.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
131.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
131.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
131.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
131.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
130.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
130.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
130.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
129.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
129.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
128.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
128.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
128.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
128.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
128.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
128.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
128.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
128.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
127.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
127.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
127.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
127.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
127.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
126.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
126.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
126.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
126.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
126.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
126.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
125.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
125.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
125.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
125.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
125.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
125.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
124.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
124.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
124.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
124.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
123.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
123.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
123.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
123.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
123.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
123.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
123.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
123.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
123.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
122.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
122.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
122.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
122.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
122.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
122.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
122.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
121.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
121.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
121.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
121.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
121.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
121.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
120.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
120.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
120.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
120.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
120.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
120.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
120.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
120.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
119.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
119.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
119.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
119.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
119.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
119.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
119.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
119.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
118.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
118.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
118.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
118.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
118.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
118.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
118.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
118.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
118.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
118.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
118.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
118.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
118.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
117.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
117.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
117.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
117.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
117.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
117.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
117.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
117.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
116.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
116.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
116.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
116.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
116.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
116.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
116.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
116.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
116.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
116.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
115.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
115.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
115.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
115.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
115.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
115.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
115.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
115.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
115.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
115.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
115.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
114.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
114.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
114.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
114.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
114.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
113.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
113.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
113.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
113.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
113.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
113.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
113.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
113.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
113.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
112.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
112.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
112.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
112.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
111.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
111.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
111.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
111.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
111.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
111.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
110.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
110.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
110.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
110.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
110.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
110.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
110.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
109.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
109.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
109.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
109.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
109.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
109.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
109.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
109.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
109.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
109.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
108.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
108.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
108.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
108.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
108.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
108.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
108.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
108.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
108.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
108.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
108.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
107.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
107.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
107.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
107.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
107.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
107.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
107.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
107.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
107.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
106.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
106.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
106.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
106.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
106.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
106.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
106.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
105.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
105.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
105.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
105.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
104.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
104.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
104.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
104.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
104.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
104.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
104.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
104.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
103.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
103.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
103.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
103.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
103.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
103.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
102.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
102.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
102.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
102.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
102.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
102.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
102.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
101.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
101.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
101.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
101.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
101.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
101.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
100.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
100.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
100.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
100.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
100.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
100.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
100.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
100.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
100.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
100.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
100.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
100.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
100.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
100.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
100.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
100.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
99.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
99.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
99.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
99.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
99.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
98.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
98.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
98.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
98.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
98.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
98.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
97.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
97.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
97.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
97.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
96.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
96.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
96.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
96.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
96.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
96.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
96.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
95.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
95.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
95.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
95.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
95.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
95.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
95.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
94.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
94.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
94.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
94.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
94.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
94.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
94.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
94.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
93.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
93.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
93.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
92.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
92.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
92.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
92.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
92.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
92.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
91.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
91.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
91.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
91.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
91.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
91.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
91.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
91.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
91.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
91.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
91.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
90.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
90.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
90.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
90.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
90.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
88.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
88.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
88.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
88.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
88.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
88.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
88.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
87.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
87.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
87.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
87.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
86.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
86.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
86.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
86.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
85.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
85.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
85.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
85.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
85.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
85.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
85.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
84.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
84.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
84.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
84.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
84.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
84.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
84.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
84.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
83.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
83.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
83.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
83.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
83.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
82.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
82.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
82.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
81.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
81.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
80.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
80.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
80.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
80.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
80.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
80.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
80.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
79.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
79.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
79.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
78.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
78.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
78.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
78.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
78.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
78.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
78.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
77.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
77.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
77.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
77.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
77.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
76.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
76.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
76.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
76.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
76.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
75.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
75.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
74.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
74.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
74.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
74.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
73.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
72.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
72.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
72.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
72.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
71.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
71.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
71.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
71.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
70.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
70.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
69.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
69.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
68.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
68.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
67.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
66.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
65.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
65.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
65.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
64.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
63.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
63.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
63.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
62.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
62.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
62.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
62.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
61.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
61.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
60.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
60.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
59.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
58.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
58.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
54.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
53.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
52.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
51.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
50.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
49.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
49.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
49.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
46.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
42.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
40.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPZ1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
107.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
264.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
229.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
201.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
194.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
168.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
158.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
152.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
145.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
143.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
142.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
141.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
139.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
137.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
135.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
134.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
130.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
125.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
124.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
124.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
124.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
123.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
122.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
122.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
120.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
120.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
117.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
116.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
115.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
114.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
114.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
112.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
112.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
112.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
111.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
111.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
110.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
110.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
109.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
108.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
107.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
105.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
105.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
104.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
103.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
103.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
102.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
102.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
100.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
99.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
99.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
98.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
98.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
97.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
97.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
97.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
96.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
96.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
95.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
94.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
94.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
93.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
92.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
92.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
92.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
92.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
91.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
91.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
91.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
90.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
90.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
90.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
88.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
88.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
88.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
87.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
87.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
87.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
86.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
86.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
86.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
85.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
85.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
84.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
84.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
84.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
83.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
83.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
82.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
80.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
80.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
78.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
76.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
72.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
72.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
71.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
68.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
68.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
65.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
59.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPZ1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
123.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
308.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
250.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
238.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
236.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
232.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
230.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
227.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
220.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
219.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
219.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
204.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
203.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
203.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
200.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
198.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
196.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
196.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
193.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
192.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
191.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
191.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
186.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
182.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
182.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
181.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
180.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
178.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
176.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
175.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
174.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
174.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
174.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
173.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
172.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
171.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
170.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
169.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
169.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
166.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
165.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
164.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
164.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
163.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
162.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
161.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
160.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
157.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
157.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
156.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
155.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
154.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
153.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
153.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
152.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
152.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
151.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
151.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
151.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
150.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
150.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
149.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
147.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
146.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
146.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
145.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
145.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
145.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
145.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
144.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
143.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
143.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
141.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
141.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
141.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
140.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
139.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
139.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
139.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
139.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
139.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
138.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
136.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
136.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
136.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
135.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
134.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
134.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
134.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
132.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
132.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
132.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
131.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
131.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
130.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
130.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
129.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
129.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
129.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
128.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
128.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
128.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
128.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
128.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
127.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
127.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
127.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
127.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
126.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
126.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
126.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
125.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
125.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
124.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
124.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
124.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
123.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
123.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
123.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
123.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
122.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
122.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
122.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
121.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
120.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
119.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
119.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
119.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
119.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
118.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
118.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
118.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
117.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
117.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
117.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
116.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
116.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
115.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
115.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
115.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
115.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
115.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
115.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
115.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
115.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
114.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
114.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
114.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
114.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
113.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
113.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
113.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
112.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
112.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
112.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
112.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
112.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
112.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
112.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
112.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
112.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
112.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
111.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
111.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
111.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
111.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
110.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
110.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
110.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
110.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
109.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
109.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
109.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
108.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
108.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
108.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
108.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
108.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
108.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
108.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
108.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
108.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
108.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
108.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
108.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
107.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
107.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
106.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
106.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
106.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
106.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
106.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
105.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
104.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
104.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
103.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
103.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
103.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
103.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
102.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
102.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
102.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
100.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
100.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
100.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
100.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
99.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
99.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
99.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
99.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
98.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
98.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
98.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
98.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
98.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
98.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
98.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
97.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
97.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
97.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
97.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
96.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
96.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
95.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
95.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
95.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
94.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
94.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
94.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
94.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
93.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
91.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
91.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
90.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
90.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
89.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
88.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
88.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
88.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
87.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
86.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
85.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
84.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
84.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
83.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
83.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
82.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
82.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
82.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
82.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
81.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
81.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
80.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
80.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
79.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
78.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
78.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
78.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
77.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
76.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
75.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
74.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
73.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
72.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
72.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
72.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
71.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
71.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
69.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
68.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
65.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
64.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
59.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
57.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
56.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
55.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
51.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
50.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
44.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
42.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
41.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
40.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
36.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
0.8
CPT0015730003
Tumor
0.8
CPT0001340003
Tumor
0.7
CPT0012550003
Tumor
0.6
CPT0078660003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0078800003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0065810003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0088780001
Normal
0.3
CPT0086820003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0025110003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0006730001
Normal
0.2
CPT0001220008
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0026410003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0001230001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0012570003
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0063330001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0006530001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0078530001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0010120001
Normal
-0.3
CPT0088900003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0015910003
Tumor
-0.5
CPT0077490003
Tumor
-0.5
CPT0011240003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
The Human Protein Atlas project is funded
