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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPZ1 is not prognostic in Glioblastoma Multiforme (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
3-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
3-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
132.2
Number of samples
141
Samples
Sample
Description
TPM
TCGA-06-0219-01A
0 years, male, white, stage:'--, dead, 22 days
240.5
TCGA-15-1444-01A
0 years, male, white, stage:'--, dead, 1537 days
227.3
TCGA-28-5220-01A
0 years, male, white, stage:'--, dead, 388 days
222.1
TCGA-19-2629-01A
0 years, male, white, stage:'--, dead, 737 days
218.4
TCGA-28-5207-01A
0 years, male, white, stage:'--, dead, 343 days
209.2
TCGA-12-0821-01A
0 years, male, white, stage:'--, dead, 323 days
207.0
TCGA-32-5222-01A
0 years, male, white, stage:'--, dead, 585 days
195.7
TCGA-14-1825-01A
0 years, male, white, stage:'--, dead, 232 days
191.5
TCGA-76-4925-01A
0 years, male, white, stage:'--, dead, 146 days
190.1
TCGA-14-1823-01A
0 years, female, white, stage:'--, dead, 543 days
189.1
TCGA-06-5408-01A
0 years, female, white, stage:'--, dead, 357 days
188.7
TCGA-14-2554-01A
0 years, female, white, stage:'--, dead, 532 days
187.7
TCGA-06-2561-01A
0 years, female, white, stage:'--, dead, 537 days
183.0
TCGA-12-3653-01A
0 years, female, white, stage:'--, dead, 442 days
179.8
TCGA-19-5960-01A
0 years, male, white, stage:'--, dead, 455 days
179.1
TCGA-06-0745-01A
0 years, male, white, stage:'--, dead, 239 days
174.2
TCGA-06-5413-01A
0 years, male, white, stage:'--, alive, 268 days
173.6
TCGA-06-0644-01A
0 years, male, black or african american, stage:'--, dead, 384 days
173.1
TCGA-28-5204-01A
0 years, male, white, stage:'--, dead, 454 days
169.9
TCGA-27-2519-01A
0 years, male, white, stage:'--, dead, 550 days
169.4
TCGA-06-5859-01A
0 years, male, white, stage:'--, alive, 139 days
164.4
TCGA-06-0130-01A
0 years, male, white, stage:'--, dead, 394 days
163.9
TCGA-06-0878-01A
0 years, male, white, stage:'--, alive, 218 days
162.7
TCGA-27-2523-01A
0 years, male, white, stage:'--, dead, 489 days
161.7
TCGA-12-5299-01A
0 years, female, white, stage:'--, dead, 98 days
158.7
TCGA-76-4929-01A
0 years, female, white, stage:'--, dead, 111 days
158.5
TCGA-12-0616-01A
0 years, female, white, stage:'--, dead, 448 days
158.0
TCGA-28-5216-01A
0 years, male, white, stage:'--, alive, 415 days
157.2
TCGA-14-0787-01A
0 years, male, asian, stage:'--, dead, 68 days
156.3
TCGA-06-2569-01A
0 years, female, black or african american, stage:'--, alive, 13 days
155.5
TCGA-19-1390-01A
0 years, female, white, stage:'--, dead, 772 days
153.9
TCGA-06-2563-01A
0 years, female, white, stage:'--, alive, 932 days
153.2
TCGA-28-5215-01A
0 years, female, white, stage:'--, dead, 335 days
150.9
TCGA-76-4931-01A
0 years, female, white, stage:'--, dead, 279 days
150.7
TCGA-28-5218-01A
0 years, male, white, stage:'--, dead, 157 days
150.3
TCGA-28-5208-01A
0 years, male, white, stage:'--, dead, 544 days
149.6
TCGA-06-0646-01A
0 years, male, white, stage:'--, dead, 175 days
148.7
TCGA-06-2564-01A
0 years, male, white, stage:'--, alive, 181 days
147.6
TCGA-28-5209-01A
0 years, female, white, stage:'--, alive, 442 days
146.4
TCGA-06-5856-01A
0 years, male, white, stage:'--, dead, 114 days
145.7
TCGA-06-0178-01A
0 years, male, white, stage:'--, dead, 2681 days
144.6
TCGA-06-2559-01A
0 years, male, white, stage:'--, dead, 150 days
144.5
TCGA-76-4932-01A
0 years, female, white, stage:'--, dead, 1458 days
144.0
TCGA-06-5411-01A
0 years, male, white, stage:'--, dead, 254 days
143.7
TCGA-12-5295-01A
0 years, female, white, stage:'--, dead, 454 days
142.8
TCGA-06-0174-01A
0 years, male, white, stage:'--, dead, 98 days
142.3
TCGA-32-2634-01A
0 years, male, white, stage:'--, alive, 693 days
142.2
TCGA-12-0618-01A
0 years, male, white, stage:'--, dead, 395 days
142.1
TCGA-06-5858-01A
0 years, female, white, stage:'--, alive, 187 days
141.6
TCGA-02-2483-01A
0 years, male, asian, stage:'--, alive, 466 days
140.7
TCGA-26-5133-01A
0 years, male, white, stage:'--, alive, 452 days
140.2
TCGA-06-5416-01A
0 years, female, white, stage:'--, alive, 204 days
140.0
TCGA-27-2521-01A
0 years, male, white, stage:'--, dead, 510 days
138.2
TCGA-06-0686-01A
0 years, male, white, stage:'--, dead, 432 days
137.8
TCGA-06-0156-01A
0 years, male, white, stage:'--, dead, 178 days
137.1
TCGA-15-0742-01A
0 years, male, white, stage:'--, dead, 419 days
137.0
TCGA-12-3650-01A
0 years, male, white, stage:'--, dead, 333 days
136.0
TCGA-32-2615-01A
0 years, male, white, stage:'--, dead, 485 days
135.0
TCGA-06-0238-01A
0 years, male, white, stage:'--, dead, 405 days
134.7
TCGA-76-4927-01A
0 years, male, white, stage:'--, dead, 535 days
134.6
TCGA-06-0211-01A
0 years, male, white, stage:'--, dead, 360 days
133.9
TCGA-27-1830-01A
0 years, male, white, stage:'--, dead, 154 days
133.1
TCGA-12-3652-01A
0 years, male, white, stage:'--, dead, 1062 days
131.9
TCGA-27-2526-01A
0 years, female, white, stage:'--, dead, 87 days
130.5
TCGA-06-5412-01A
0 years, female, white, stage:'--, dead, 138 days
130.5
TCGA-28-1753-01A
0 years, male, white, stage:'--, alive, 37 days
130.2
TCGA-27-1832-01A
0 years, female, white, stage:'--, dead, 300 days
129.7
TCGA-06-2565-01A
0 years, male, asian, stage:'--, dead, 506 days
128.9
TCGA-02-2485-01A
0 years, male, black or african american, stage:'--, alive, 470 days
128.9
TCGA-06-0157-01A
0 years, female, white, stage:'--, dead, 97 days
128.8
TCGA-06-2562-01A
0 years, male, white, stage:'--, dead, 382 days
128.1
TCGA-06-5414-01A
0 years, male, white, stage:'--, alive, 273 days
127.7
TCGA-06-2567-01A
0 years, male, white, stage:'--, dead, 133 days
127.6
TCGA-28-2509-01A
0 years, female, white, stage:'--, alive, 145 days
127.3
TCGA-32-2632-01A
0 years, male, white, stage:'--, dead, 269 days
127.1
TCGA-27-1835-01A
0 years, female, white, stage:'--, dead, 648 days
126.3
TCGA-14-1829-01A
0 years, male, black or african american, stage:'--, alive, 218 days
126.2
TCGA-02-0047-01A
0 years, male, white, stage:'--, dead, 448 days
126.0
TCGA-27-1834-01A
0 years, male, white, stage:'--, dead, 1233 days
125.9
TCGA-06-0138-01A
0 years, male, white, stage:'--, dead, 737 days
125.1
TCGA-26-5135-01A
0 years, female, white, stage:'--, dead, 270 days
124.4
TCGA-19-2619-01A
0 years, female, black or african american, stage:'--, alive, 294 days
123.7
TCGA-06-5410-01A
0 years, female, white, stage:'--, dead, 108 days
123.2
TCGA-14-1034-01A
0 years, female, stage:'--, dead, 485 days
122.2
TCGA-06-2558-01A
0 years, female, white, stage:'--, dead, 380 days
121.8
TCGA-06-2570-01A
0 years, female, white, stage:'--, alive, 958 days
120.9
TCGA-02-2486-01A
0 years, male, white, stage:'--, dead, 618 days
119.7
TCGA-16-0846-01A
0 years, male, white, stage:'--, dead, 119 days
119.7
TCGA-06-1804-01A
0 years, female, white, stage:'--, dead, 414 days
118.3
TCGA-14-0817-01A
0 years, female, white, stage:'--, dead, 164 days
118.2
TCGA-06-5418-01A
0 years, female, white, stage:'--, dead, 83 days
117.8
TCGA-06-5417-01A
0 years, female, white, stage:'--, alive, 155 days
117.0
TCGA-06-0750-01A
0 years, male, white, stage:'--, dead, 28 days
116.9
TCGA-27-2528-01A
0 years, male, white, stage:'--, dead, 480 days
116.8
TCGA-27-2524-01A
0 years, male, white, stage:'--, dead, 231 days
116.1
TCGA-32-1970-01A
0 years, male, white, stage:'--, dead, 468 days
115.7
TCGA-32-2638-01A
0 years, male, white, stage:'--, dead, 766 days
115.5
TCGA-26-5139-01A
0 years, female, white, stage:'--, alive, 48 days
115.3
TCGA-06-0129-01A
0 years, male, asian, stage:'--, dead, 1024 days
115.0
TCGA-06-0187-01A
0 years, male, white, stage:'--, dead, 828 days
114.9
TCGA-06-0882-01A
0 years, male, white, stage:'--, dead, 632 days
113.5
TCGA-41-2572-01A
0 years, male, white, stage:'--, dead, 406 days
112.4
TCGA-06-0210-01A
0 years, female, white, stage:'--, dead, 225 days
111.8
TCGA-28-2514-01A
0 years, male, asian, stage:'--, alive, 160 days
111.7
TCGA-32-1980-01A
0 years, male, white, stage:'--, dead, 36 days
111.5
TCGA-06-0747-01A
0 years, male, white, stage:'--, dead, 82 days
111.4
TCGA-28-2513-01A
0 years, female, white, stage:'--, alive, 222 days
109.8
TCGA-06-2557-01A
0 years, male, black or african american, stage:'--, dead, 33 days
109.7
TCGA-41-4097-01A
0 years, female, white, stage:'--, dead, 6 days
108.2
TCGA-32-2616-01A
0 years, female, white, stage:'--, dead, 224 days
108.0
TCGA-06-0125-01A
0 years, female, white, stage:'--, dead, 1448 days
107.6
TCGA-06-0743-01A
0 years, male, white, stage:'--, dead, 803 days
106.8
TCGA-14-0871-01A
0 years, female, white, stage:'--, dead, 880 days
106.4
TCGA-06-0645-01A
0 years, female, white, stage:'--, dead, 175 days
105.6
TCGA-06-0132-01A
0 years, male, white, stage:'--, dead, 771 days
104.7
TCGA-41-3915-01A
0 years, male, white, stage:'--, dead, 360 days
104.4
TCGA-27-1837-01A
0 years, male, white, stage:'--, dead, 427 days
104.2
TCGA-19-4065-01A
0 years, male, white, stage:'--, alive, 214 days
104.1
TCGA-06-0190-01A
0 years, male, white, stage:'--, dead, 317 days
104.1
TCGA-32-1982-01A
0 years, female, white, stage:'--, dead, 142 days
104.0
TCGA-08-0386-01A
0 years, male, white, stage:'--, dead, 548 days
103.8
TCGA-06-0168-01A
0 years, female, white, stage:'--, dead, 598 days
103.1
TCGA-27-1831-01A
0 years, male, white, stage:'--, dead, 505 days
102.5
TCGA-14-0789-01A
0 years, male, white, stage:'--, dead, 342 days
97.8
TCGA-02-0055-01A
0 years, female, white, stage:'--, dead, 76 days
97.5
TCGA-06-0158-01A
0 years, male, white, stage:'--, dead, 329 days
95.7
TCGA-06-0749-01A
0 years, male, black or african american, stage:'--, dead, 82 days
95.2
TCGA-19-2625-01A
0 years, female, white, stage:'--, dead, 124 days
93.2
TCGA-06-0184-01A
0 years, male, white, stage:'--, dead, 2126 days
90.2
TCGA-06-0139-01A
0 years, male, white, stage:'--, dead, 362 days
88.8
TCGA-06-0141-01A
0 years, male, white, stage:'--, dead, 313 days
87.1
TCGA-41-5651-01A
0 years, female, black or african american, stage:'--, dead, 460 days
86.9
TCGA-26-1442-01A
0 years, male, white, stage:'--, alive, 953 days
86.3
TCGA-19-2620-01A
0 years, male, white, stage:'--, dead, 148 days
84.0
TCGA-06-0744-01A
0 years, male, white, stage:'--, dead, 1426 days
83.6
TCGA-12-0619-01A
0 years, male, white, stage:'--, dead, 1062 days
69.8
TCGA-19-2624-01A
0 years, male, white, stage:'--, dead, 5 days
69.2
TCGA-32-4213-01A
0 years, female, white, stage:'--, alive, 604 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPZ1 is not prognostic in Glioblastoma Multiforme (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
3-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
3-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.4
Number of samples
58
Samples
Sample
Description
TPM
AK156
N, NA, stage:NA, dead, 330 days
58.8
AK002
N, NA, stage:NA, dead, 570 days
53.9
AK185
N, NA, stage:NA, alive, 330 days
39.6
AK051
N, NA, stage:NA, dead, 360 days
37.2
AK195
N, NA, stage:NA, dead, 390 days
37.1
AK153
N, NA, stage:NA, dead, 240 days
35.2
AK124
N, NA, stage:NA, alive, 1920 days
33.7
AK003
N, NA, stage:NA, dead, 600 days
33.5
AK142
N, NA, stage:NA, alive, 90 days
33.3
AK071
N, NA, stage:NA, dead, 540 days
32.4
AK074
N, NA, stage:NA, alive, 300 days
32.2
AK227
N, NA, stage:NA, alive, 300 days
32.2
AK183
N, NA, stage:NA, alive, 360 days
32.0
AK236
N, NA, stage:NA, dead, 360 days
31.7
AK139
N, NA, stage:NA, dead, 270 days
31.3
AK055
N, NA, stage:NA, dead, 240 days
31.3
AK213
N, NA, stage:NA, alive, 2010 days
30.7
AK098
N, NA, stage:NA, dead, 660 days
30.2
AK079
N, NA, stage:NA, dead, 210 days
30.0
AK218
N, NA, stage:NA, dead, 180 days
30.0
AK123
N, NA, stage:NA, dead, 180 days
29.9
AK149
N, NA, stage:NA, dead, 420 days
29.9
AK030
N, NA, stage:NA, dead, 120 days
29.2
AK066
N, NA, stage:NA, alive, 960 days
29.2
AK081
N, NA, stage:NA, dead, 180 days
29.0
AK188
N, NA, stage:NA, alive, 420 days
28.6
AK231
N, NA, stage:NA, dead, 240 days
28.0
AK099
N, NA, stage:NA, dead, 420 days
27.9
AK041
N, NA, stage:NA, alive, 810 days
27.7
AK165
N, NA, stage:NA, alive, 360 days
27.6
AK133
N, NA, stage:NA, dead, 360 days
27.4
AK178
N, NA, stage:NA, dead, 240 days
27.2
AK035
N, NA, stage:NA, dead, 210 days
27.1
AK049
N, NA, stage:NA, dead, 180 days
26.7
AK068
N, NA, stage:NA, alive, 360 days
26.4
AK100
N, NA, stage:NA, alive, 960 days
25.8
AK088
N, NA, stage:NA, dead, 360 days
25.7
AK199
N, NA, stage:NA, alive, 1860 days
25.2
AK216
N, NA, stage:NA, dead, 360 days
25.1
AK005
N, NA, stage:NA, dead, 240 days
25.0
AK173
N, NA, stage:NA, dead, 180 days
24.9
AK072
N, NA, stage:NA, dead, 150 days
24.9
AK076
N, NA, stage:NA, alive, 660 days
24.5
AK103
N, NA, stage:NA, alive, 1320 days
24.1
AK117
N, NA, stage:NA, dead, 210 days
24.0
AK089
N, NA, stage:NA, dead, 330 days
23.7
AK158
N, NA, stage:NA, dead, 360 days
23.6
AK226
N, NA, stage:NA, dead, 360 days
23.5
AK053
N, NA, stage:NA, dead, 300 days
23.0
AK043
N, NA, stage:NA, alive, 660 days
22.5
AK205
N, NA, stage:NA, dead, 120 days
22.4
AK085
N, NA, stage:NA, alive, 660 days
22.1
AK134
N, NA, stage:NA, dead, 360 days
22.0
AK091
N, NA, stage:NA, dead, 210 days
21.7
AK167
N, NA, stage:NA, dead, 180 days
19.3
AK015
N, NA, stage:NA, alive, 720 days
17.7
AK102
N, NA, stage:NA, alive, 1740 days
14.6
AK006
N, NA, stage:NA, dead, 360 days
14.3
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GLIOBLASTOMA MULTIFORME - Protein relative expression (CPTAC)
Number of samples
110
Samples
Sample ID
Sample type
nRPX
CPT0208980003
Tumor
0.6
CPT0207090003
Tumor
0.5
CPT0125570003
Tumor
0.4
CPT0093450003
Tumor
0.4
CPT0168080003
Tumor
0.4
CPT0218330004
Tumor
0.4
CPT0078580003
Tumor
0.4
CPT0089150003
Tumor
0.3
CPT0217060003
Tumor
0.3
CPT0186100003
Tumor
0.3
CPT0216920008
Tumor
0.3
CPT0228220003
Tumor
0.3
CPT0189850004
Tumor
0.3
CPT0161730003
Tumor
0.3
CPT0087570003
Tumor
0.2
CPT0205450004
Tumor
0.2
CPT0218770003
Tumor
0.2
CPT0206670004
Tumor
0.2
CPT0182500003
Tumor
0.2
CPT0168480003
Tumor
0.2
CPT0218830004
Tumor
0.2
CPT0190360004
Tumor
0.2
CPT0127420003
Tumor
0.2
CPT0127480003
Tumor
0.2
CPT0093510003
Tumor
0.2
CPT0206000004
Tumor
0.1
CPT0168830003
Tumor
0.1
CPT0205570003
Tumor
0.1
CPT0217000004
Tumor
0.1
CPT0167750004
Tumor
0.1
CPT0168720003
Tumor
0.1
CPT0206780003
Tumor
0.1
CPT0167970003
Tumor
0.1
CPT0204380003
Normal
0.1
CPT0217710008
Tumor
0.1
CPT0064650003
Tumor
0.1
CPT0167640003
Tumor
0.1
CPT0079790003
Tumor
0.1
CPT0217100003
Tumor
0.1
CPT0167530003
Tumor
0.1
CPT0217880003
Tumor
0.1
CPT0205780003
Tumor
0.1
CPT0093590003
Tumor
0.1
CPT0064890003
Tumor
0.1
CPT0218690004
Tumor
0.1
CPT0093360003
Tumor
0.1
CPT0196850003
Tumor
0.1
CPT0002410011
Tumor
0.1
CPT0224390004
Tumor
0.1
CPT0162020003
Tumor
0.1
CPT0225760003
Tumor
0.0
CPT0209440003
Tumor
0.0
CPT0123530003
Tumor
0.0
CPT0175060003
Tumor
0.0
CPT0199770003
Tumor
0.0
CPT0217190003
Tumor
0.0
CPT0162100003
Tumor
0.0
CPT0167860004
Tumor
0.0
CPT0206560003
Tumor
0.0
CPT0224600003
Tumor
0.0
CPT0087680003
Tumor
0.0
CPT0071100003
Tumor
0.0
CPT0221180003
Tumor
0.0
CPT0206330003
Tumor
0.0
CPT0168270003
Tumor
0.0
CPT0225730003
Tumor
0.0
CPT0093550003
Tumor
0.0
CPT0125510003
Tumor
0.0
CPT0224540004
Tumor
0.0
CPT0206880003
Tumor
0.0
CPT0087730003
Tumor
0.0
CPT0189650004
Tumor
0.0
CPT0189250003
Tumor
0.0
CPT0171580008
Tumor
0.0
CPT0224330003
Tumor
0.0
CPT0206230003
Tumor
-0.1
CPT0218890004
Tumor
-0.1
CPT0182580003
Tumor
-0.1
CPT0182550003
Tumor
-0.1
CPT0125220003
Tumor
-0.1
CPT0207030003
Tumor
-0.1
CPT0204390003
Normal
-0.1
CPT0204360003
Normal
-0.1
CPT0204340003
Normal
-0.1
CPT0217430008
Tumor
-0.1
CPT0205670004
Tumor
-0.1
CPT0189750004
Tumor
-0.1
CPT0168590003
Tumor
-0.1
CPT0218670003
Tumor
-0.1
CPT0087950003
Tumor
-0.2
CPT0218960004
Tumor
-0.2
CPT0219080004
Tumor
-0.2
CPT0204370003
Normal
-0.2
CPT0204400003
Normal
-0.2
CPT0201710003
Tumor
-0.3
CPT0204420003
Normal
-0.3
CPT0189460003
Tumor
-0.3
CPT0092440003
Tumor
-0.3
CPT0206110003
Tumor
-0.3
CPT0104330003
Tumor
-0.3
CPT0168380003
Tumor
-0.3
CPT0104220003
Tumor
-0.3
CPT0162140003
Tumor
-0.3
CPT0206450003
Tumor
-0.3
CPT0205890003
Tumor
-0.3
CPT0204330003
Normal
-0.3
CPT0189570004
Tumor
-0.4
CPT0190240004
Tumor
-0.4
CPT0204350003
Normal
-0.5
CPT0204410003
Normal
-0.5
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GLIOMA - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.