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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OGFOD2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
44.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
30.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
24.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
19.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
19.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
18.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
17.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
15.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
15.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
14.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
14.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
14.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
14.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
13.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
13.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
12.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
12.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
12.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
11.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
11.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
8.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
8.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
7.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OGFOD2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
23.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
21.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
20.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
20.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
18.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
17.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
17.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
16.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
15.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
14.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
14.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
14.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
14.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
14.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
14.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
14.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
14.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
13.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
12.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
12.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
12.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
12.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
12.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
12.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
11.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
11.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
11.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
11.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
11.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
11.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
11.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
11.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
10.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
10.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
10.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
10.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
10.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
10.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
10.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
10.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
10.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
10.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
10.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
10.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
9.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
9.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
9.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
9.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
9.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
9.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
9.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
9.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
9.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
9.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
9.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
9.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
9.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
9.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
9.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
9.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
9.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
8.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
8.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
8.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
8.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
8.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
8.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
8.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
8.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
8.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
8.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
8.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
8.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
8.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
8.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
8.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
8.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
8.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
8.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
8.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
8.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
8.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
8.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
8.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
8.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
8.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
8.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
8.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
8.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
8.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
8.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
8.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
8.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
8.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
8.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
8.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
7.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
7.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
7.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
7.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
7.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
7.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
7.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
7.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
7.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
7.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
7.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
7.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
7.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
7.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
7.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
7.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
7.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
7.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
7.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
7.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
7.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
7.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
7.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
7.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
7.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
7.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
7.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
7.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
7.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
7.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
7.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
7.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
6.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
6.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
6.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
6.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
6.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
6.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
6.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
6.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
6.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
6.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
6.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
6.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
6.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
6.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
6.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
6.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
6.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
6.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
6.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
6.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
6.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
6.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
6.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
6.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
6.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
6.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
6.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
6.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
6.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
5.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
5.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
5.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
5.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
5.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
5.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
5.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
5.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
5.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
5.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
5.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
5.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
5.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
5.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
5.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
5.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
4.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
4.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
4.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
4.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
4.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
4.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
4.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
3.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
3.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
3.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
3.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
2.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OGFOD2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
30.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
29.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
29.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
21.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
20.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
20.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
19.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
19.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
18.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
17.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
16.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
15.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
14.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
14.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
14.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
14.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
13.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
13.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
12.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
11.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
11.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
11.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
11.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
11.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
10.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
10.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
10.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
10.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
10.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
10.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
10.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
9.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
8.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
7.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
5.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
5.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
4.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
4.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OGFOD2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
55.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
43.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
39.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
37.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
36.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
36.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
35.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
35.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
31.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
31.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
30.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
30.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
30.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
28.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
28.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
28.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
27.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
27.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
25.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
24.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
23.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
23.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
22.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
22.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
22.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
21.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
20.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
20.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
20.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
20.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
19.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
19.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
18.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
18.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
18.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
17.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
17.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
17.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
16.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
16.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
16.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
15.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
15.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
15.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
15.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
15.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
15.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
15.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
14.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
14.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
13.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
13.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
13.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
13.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
12.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
12.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
11.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
11.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
11.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
11.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
11.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
11.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
11.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
11.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
10.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
10.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
10.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
10.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
10.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
10.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
9.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
9.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
9.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
9.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
9.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
9.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
9.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
9.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
9.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
9.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
9.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
9.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
8.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
8.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
8.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
7.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
7.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
7.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
7.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
7.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
6.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
6.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
6.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
6.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
5.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
5.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
4.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
3.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
3.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
1.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
1.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
1.6
CPT0086820003
Tumor
0.9
CPT0024670003
Tumor
0.8
CPT0012550003
Tumor
0.8
CPT0092740003
Normal
0.7
CPT0001540009
Tumor
0.6
CPT0066430001
Normal
0.5
CPT0010170001
Normal
0.5
CPT0087050003
Normal
0.5
CPT0023360001
Normal
0.5
CPT0026420001
Normal
0.5
CPT0065450001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0092800003
Normal
0.5
CPT0023350003
Tumor
0.5
CPT0088920001
Normal
0.4
CPT0089480003
Normal
0.4
CPT0079000001
Normal
0.4
CPT0012180003
Tumor
0.4
CPT0064400001
Normal
0.4
CPT0007870001
Normal
0.4
CPT0079270003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0020020001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0012770003
Normal
0.4
CPT0009080003
Normal
0.4
CPT0081620001
Normal
0.4
CPT0006950001
Normal
0.4
CPT0071150004
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0065810003
Tumor
0.3
CPT0023710001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0009060003
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0025880003
Tumor
0.3
CPT0000790001
Normal
0.3
CPT0000870016
Tumor
0.3
CPT0025060001
Normal
0.3
CPT0015730003
Tumor
0.3
CPT0077110003
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0077500001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0020120003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0012090003
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0001500009
Tumor
0.2
CPT0007470001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0081880003
Tumor
0.2
CPT0014160003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0088710001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0088690003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0024680001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0007860003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0001340003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0012280003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0001270001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0086030003
Tumor
-0.3
CPT0069190001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0076330003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0088630003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0084560003
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0088900003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0087040003
Tumor
-0.5
CPT0084590001
Normal
-0.5
CPT0077310003
Tumor
-0.5
CPT0077320001
Normal
-0.5
CPT0025350003
Tumor
-0.5
CPT0088970003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0075170001
Normal
-0.5
CPT0007320003
Tumor
-0.5
CPT0017850003
Tumor
-0.6
CPT0092190003
Normal
-0.6
CPT0066480003
Tumor
-0.6
CPT0092290003
Tumor
-0.7
CPT0092730003
Tumor
-0.7
CPT0079510001
Normal
-0.7
CPT0015910003
Tumor
-0.7
CPT0069160003
Tumor
-0.7
CPT0010120001
Normal
-0.9
CPT0088550004
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
