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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDKN1B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
59.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
48.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
45.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
38.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
35.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
34.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
31.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
31.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
28.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
28.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
28.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
25.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
24.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
24.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
22.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
21.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
21.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
20.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
20.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
20.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
19.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
19.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
18.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
17.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
16.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
16.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
14.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDKN1B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
137.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
84.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
81.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
77.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
76.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
75.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
75.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
74.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
72.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
71.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
68.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
67.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
67.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
67.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
67.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
67.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
66.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
65.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
65.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
65.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
65.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
64.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
63.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
63.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
63.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
63.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
61.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
61.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
61.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
60.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
60.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
60.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
60.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
60.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
60.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
59.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
59.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
59.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
58.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
58.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
58.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
58.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
58.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
58.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
57.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
57.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
57.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
57.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
57.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
57.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
56.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
56.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
56.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
56.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
56.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
56.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
56.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
56.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
55.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
55.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
55.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
55.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
55.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
55.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
55.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
54.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
54.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
54.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
54.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
53.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
53.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
53.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
53.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
53.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
53.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
53.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
53.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
53.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
53.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
53.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
53.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
52.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
52.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
52.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
52.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
52.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
52.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
52.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
51.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
51.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
51.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
51.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
51.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
51.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
50.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
50.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
50.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
50.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
50.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
50.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
50.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
50.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
50.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
50.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
49.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
49.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
49.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
49.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
49.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
49.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
49.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
49.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
49.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
48.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
48.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
47.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
47.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
47.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
47.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
47.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
47.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
47.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
47.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
47.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
47.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
47.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
47.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
47.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
47.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
47.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
47.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
47.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
47.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
46.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
46.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
46.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
46.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
46.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
46.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
46.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
46.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
46.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
46.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
46.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
45.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
45.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
45.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
45.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
45.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
45.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
45.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
45.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
45.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
45.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
45.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
45.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
45.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
45.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
45.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
44.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
44.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
44.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
44.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
44.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
44.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
44.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
44.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
43.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
43.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
43.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
43.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
43.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
43.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
43.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
43.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
43.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
43.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
43.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
42.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
42.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
42.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
42.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
42.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
42.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
42.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
42.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
42.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
42.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
42.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
42.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
42.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
42.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
42.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
41.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
41.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
41.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
41.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
41.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
41.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
41.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
41.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
40.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
40.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
40.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
40.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
40.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
39.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
39.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
39.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
39.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
39.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
39.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
39.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
38.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
38.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
38.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
38.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
38.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
38.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
38.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
38.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
38.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
38.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
38.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
38.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
37.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
37.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
37.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
37.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
37.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
37.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
37.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
37.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
37.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
37.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
37.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
37.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
36.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
36.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
36.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
36.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
36.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
36.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
36.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
36.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
36.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
36.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
36.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
36.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
36.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
36.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
36.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
36.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
35.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
35.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
35.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
35.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
35.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
35.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
35.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
35.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
35.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
34.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
34.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
34.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
34.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
34.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
34.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
34.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
34.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
34.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
34.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
34.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
34.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
34.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
34.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
34.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
33.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
33.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
33.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
33.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
33.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
33.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
33.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
33.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
32.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
32.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
32.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
32.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
32.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
32.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
32.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
32.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
32.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
32.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
32.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
32.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
32.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
32.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
32.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
31.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
31.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
31.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
31.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
31.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
31.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
31.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
31.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
31.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
31.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
31.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
30.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
30.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
30.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
30.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
30.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
30.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
30.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
30.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
30.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
30.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
30.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
29.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
29.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
29.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
29.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
29.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
29.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
29.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
29.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
29.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
28.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
28.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
28.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
28.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
28.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
28.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
28.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
28.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
28.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
28.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
28.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
27.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
27.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
27.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
27.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
26.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
26.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
26.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
26.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
26.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
26.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
26.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
26.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
26.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
26.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
26.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
26.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
26.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
26.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
26.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
25.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
25.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
25.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
25.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
25.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
25.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
25.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
25.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
25.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
24.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
24.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
24.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
24.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
24.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
24.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
24.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
24.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
24.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
24.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
24.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
24.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
23.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
23.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
23.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
23.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
23.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
22.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
22.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
22.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
22.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
22.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
22.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
22.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
21.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
21.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
21.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
21.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
20.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
20.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
20.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
20.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
20.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
20.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
19.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
19.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
19.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
19.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
18.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
18.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
18.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
18.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
17.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
17.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
17.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
16.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
16.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
16.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
15.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
15.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
15.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
14.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
13.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDKN1B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
121.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
109.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
102.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
100.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
98.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
95.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
89.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
89.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
88.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
86.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
85.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
85.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
83.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
81.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
80.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
76.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
76.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
75.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
75.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
72.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
71.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
71.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
71.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
69.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
69.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
66.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
64.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
64.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
64.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
63.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
63.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
62.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
62.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
62.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
61.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
61.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
61.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
60.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
60.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
59.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
58.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
58.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
58.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
56.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
56.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
56.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
55.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
55.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
55.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
54.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
52.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
51.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
51.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
51.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
51.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
50.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
50.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
50.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
49.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
48.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
48.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
48.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
47.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
47.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
47.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
47.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
47.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
46.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
46.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
46.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
45.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
45.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
45.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
44.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
44.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
43.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
43.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
42.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
41.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
40.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
40.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
39.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
39.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
38.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
36.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
35.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
35.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
34.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
34.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
33.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
33.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
32.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
31.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
28.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
28.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
20.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
20.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDKN1B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
88.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
70.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
68.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
58.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
58.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
57.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
55.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
54.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
54.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
53.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
51.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
51.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
50.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
49.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
48.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
48.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
48.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
48.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
47.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
46.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
45.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
41.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
40.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
39.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
38.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
38.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
38.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
38.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
38.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
37.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
36.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
36.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
35.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
35.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
35.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
34.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
34.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
34.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
33.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
33.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
33.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
33.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
33.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
33.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
33.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
32.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
32.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
32.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
32.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
32.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
32.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
31.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
31.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
31.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
31.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
31.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
31.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
31.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
31.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
31.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
31.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
30.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
30.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
30.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
30.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
30.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
29.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
29.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
29.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
29.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
29.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
29.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
28.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
27.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
27.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
27.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
27.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
27.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
27.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
27.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
26.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
26.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
26.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
26.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
26.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
26.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
25.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
25.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
25.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
25.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
25.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
25.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
24.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
24.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
24.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
24.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
23.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
23.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
23.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
23.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
23.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
23.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
22.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
22.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
22.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
21.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
21.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
21.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
21.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
20.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
20.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
20.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
20.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
20.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
19.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
19.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
19.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
19.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
18.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
18.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
18.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
18.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
18.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
18.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
18.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
18.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
17.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
17.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
17.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
16.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
16.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
16.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
16.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
16.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
15.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
15.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
15.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
15.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
14.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
14.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
12.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
12.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
10.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
9.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
4.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0006440003
Tumor
1.8
CPT0077110003
Tumor
1.1
CPT0088550004
Tumor
1.0
CPT0026410003
Tumor
0.8
CPT0078990003
Tumor
0.8
CPT0014370004
Tumor
0.8
CPT0025350003
Tumor
0.7
CPT0010160003
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0014450004
Tumor
0.6
CPT0085670003
Tumor
0.6
CPT0000780007
Tumor
0.6
CPT0009060003
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0006630003
Tumor
0.5
CPT0075720003
Tumor
0.5
CPT0012080003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0077320001
Normal
0.4
CPT0071150004
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0075570001
Normal
0.4
CPT0088900003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0012900004
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0009000003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0000870016
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0001180009
Tumor
0.3
CPT0089460004
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0025880003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0081600003
Tumor
0.2
CPT0020020001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0009020003
Normal
0.1
CPT0088640003
Normal
0.1
CPT0079380003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0079300001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0012290003
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0088920001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0002350011
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0078930003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0065430003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0012770003
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0021240003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0081880003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0023350003
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0001220008
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0092310003
Normal
-0.5
CPT0069000003
Tumor
-0.5
CPT0015730003
Tumor
-0.5
CPT0001340003
Tumor
-0.5
CPT0025230003
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0012550003
Tumor
-0.6
CPT0065750003
Tumor
-0.6
CPT0079180003
Tumor
-0.7
CPT0092290003
Tumor
-0.7
CPT0011410003
Tumor
-0.8
CPT0078660003
Tumor
-0.9
CPT0002270011
Tumor
-0.9
CPT0078800003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
