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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
186.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
390.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
351.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
292.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
290.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
281.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
279.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
263.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
261.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
261.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
251.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
251.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
249.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
248.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
247.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
242.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
235.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
234.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
233.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
226.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
221.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
213.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
212.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
210.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
205.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
204.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
201.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
194.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
193.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
192.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
191.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
188.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
187.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
186.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
184.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
179.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
176.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
176.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
170.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
162.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
159.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
158.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
158.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
154.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
153.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
149.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
141.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
139.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
138.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
136.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
132.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
130.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
127.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
126.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
121.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
115.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
111.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
107.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
102.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
86.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
79.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
68.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
65.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
56.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
280.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
630.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
608.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
587.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
573.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
541.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
530.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
525.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
516.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
507.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
503.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
487.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
480.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
464.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
459.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
446.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
443.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
442.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
437.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
433.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
433.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
431.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
430.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
418.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
418.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
417.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
414.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
414.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
413.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
412.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
409.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
406.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
406.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
404.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
403.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
402.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
402.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
400.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
399.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
399.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
397.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
396.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
396.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
391.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
390.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
390.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
388.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
384.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
384.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
384.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
383.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
382.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
382.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
381.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
379.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
377.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
372.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
371.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
370.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
370.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
370.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
370.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
370.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
368.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
368.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
368.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
367.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
367.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
366.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
365.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
363.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
363.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
363.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
363.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
363.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
363.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
362.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
362.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
362.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
360.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
358.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
355.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
355.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
355.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
355.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
353.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
353.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
353.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
352.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
351.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
348.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
347.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
347.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
346.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
346.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
345.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
341.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
341.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
341.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
341.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
340.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
339.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
339.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
339.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
338.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
338.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
337.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
337.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
336.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
335.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
334.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
332.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
332.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
332.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
331.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
330.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
328.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
328.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
328.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
327.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
325.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
324.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
323.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
323.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
322.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
322.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
321.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
321.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
321.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
321.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
321.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
321.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
321.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
320.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
319.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
317.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
317.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
317.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
316.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
315.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
315.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
314.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
313.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
313.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
313.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
312.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
312.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
312.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
312.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
310.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
309.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
308.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
308.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
306.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
306.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
306.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
305.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
305.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
304.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
304.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
304.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
303.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
302.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
301.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
301.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
300.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
299.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
299.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
298.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
298.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
298.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
298.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
298.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
298.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
297.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
297.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
296.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
296.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
296.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
296.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
295.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
295.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
295.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
295.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
295.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
294.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
293.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
293.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
293.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
292.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
292.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
291.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
291.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
290.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
290.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
290.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
289.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
289.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
289.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
289.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
289.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
288.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
288.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
288.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
288.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
288.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
287.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
287.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
287.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
287.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
286.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
286.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
285.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
285.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
284.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
284.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
284.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
284.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
283.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
283.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
282.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
282.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
282.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
282.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
281.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
281.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
281.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
281.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
281.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
280.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
280.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
280.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
279.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
279.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
279.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
278.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
278.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
278.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
277.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
277.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
277.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
277.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
277.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
277.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
276.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
276.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
275.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
275.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
275.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
274.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
274.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
274.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
273.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
273.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
273.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
273.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
273.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
272.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
272.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
272.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
272.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
271.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
271.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
270.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
270.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
270.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
269.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
269.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
269.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
266.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
266.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
266.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
265.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
265.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
264.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
264.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
264.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
264.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
263.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
262.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
262.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
262.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
262.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
261.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
261.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
261.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
261.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
261.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
260.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
260.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
259.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
259.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
259.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
259.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
258.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
258.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
257.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
257.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
257.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
256.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
256.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
256.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
256.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
255.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
255.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
254.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
254.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
253.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
253.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
252.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
252.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
252.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
252.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
252.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
252.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
251.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
251.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
251.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
250.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
250.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
250.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
250.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
249.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
249.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
248.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
248.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
248.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
248.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
247.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
247.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
247.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
247.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
247.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
245.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
245.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
245.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
244.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
244.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
244.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
244.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
243.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
243.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
243.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
243.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
242.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
242.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
241.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
241.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
241.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
241.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
241.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
241.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
240.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
240.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
239.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
239.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
238.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
238.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
238.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
238.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
237.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
237.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
237.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
237.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
236.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
236.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
236.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
235.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
234.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
234.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
234.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
234.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
234.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
234.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
234.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
234.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
233.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
233.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
233.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
233.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
233.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
233.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
233.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
232.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
232.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
232.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
231.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
231.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
231.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
231.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
230.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
230.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
230.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
230.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
230.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
230.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
229.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
229.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
228.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
228.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
227.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
226.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
226.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
226.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
225.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
225.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
225.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
225.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
224.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
224.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
223.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
223.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
223.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
222.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
222.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
221.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
220.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
220.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
220.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
220.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
219.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
219.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
219.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
219.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
218.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
218.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
218.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
217.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
217.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
216.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
216.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
216.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
215.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
215.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
215.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
215.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
214.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
213.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
212.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
212.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
212.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
211.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
211.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
211.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
211.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
211.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
210.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
210.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
208.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
208.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
208.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
207.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
207.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
206.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
205.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
205.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
205.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
205.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
203.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
202.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
202.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
202.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
201.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
201.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
200.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
199.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
198.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
198.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
197.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
196.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
196.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
194.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
194.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
193.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
192.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
192.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
192.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
192.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
191.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
191.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
190.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
189.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
189.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
188.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
187.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
187.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
187.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
186.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
186.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
185.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
185.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
185.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
184.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
184.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
184.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
183.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
181.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
179.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
177.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
173.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
172.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
171.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
170.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
170.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
168.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
168.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
167.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
165.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
155.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
154.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
150.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
150.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
146.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
143.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
137.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
135.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
135.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
127.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
123.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
122.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
116.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC3 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
330.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
642.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
578.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
573.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
553.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
516.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
502.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
500.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
456.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
454.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
438.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
436.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
426.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
418.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
410.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
407.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
406.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
402.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
396.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
386.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
379.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
379.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
376.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
372.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
371.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
367.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
366.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
366.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
365.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
361.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
360.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
360.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
357.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
356.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
354.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
350.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
349.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
349.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
347.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
347.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
344.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
344.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
343.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
343.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
339.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
337.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
337.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
334.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
333.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
331.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
324.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
322.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
318.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
312.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
309.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
309.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
307.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
303.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
295.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
295.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
294.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
293.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
290.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
288.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
287.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
287.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
286.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
283.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
282.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
281.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
278.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
277.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
277.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
275.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
272.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
270.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
269.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
269.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
267.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
265.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
261.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
261.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
258.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
258.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
256.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
255.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
253.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
252.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
250.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
250.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
249.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
229.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
227.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
220.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
213.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
205.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
201.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
190.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
189.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
189.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
285.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
625.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
607.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
606.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
592.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
591.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
574.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
569.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
561.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
551.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
530.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
525.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
522.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
519.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
518.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
506.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
500.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
491.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
485.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
477.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
472.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
467.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
465.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
457.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
452.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
451.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
448.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
447.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
446.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
442.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
441.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
439.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
439.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
436.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
433.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
430.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
421.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
421.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
414.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
414.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
412.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
409.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
409.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
409.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
409.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
408.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
407.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
403.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
403.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
401.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
399.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
396.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
394.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
393.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
393.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
393.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
390.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
390.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
390.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
388.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
387.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
385.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
385.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
383.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
377.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
376.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
376.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
375.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
368.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
368.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
364.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
363.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
362.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
362.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
361.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
361.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
360.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
360.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
359.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
358.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
357.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
357.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
355.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
354.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
353.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
350.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
350.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
349.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
348.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
347.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
347.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
347.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
346.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
346.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
344.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
343.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
342.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
339.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
338.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
337.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
336.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
335.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
335.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
334.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
333.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
331.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
329.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
328.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
326.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
322.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
321.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
320.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
320.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
318.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
317.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
313.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
312.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
311.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
310.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
310.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
310.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
309.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
309.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
308.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
307.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
306.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
303.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
302.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
302.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
301.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
299.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
299.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
298.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
297.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
296.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
296.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
292.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
292.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
291.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
290.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
290.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
290.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
288.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
287.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
285.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
284.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
284.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
284.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
284.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
284.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
284.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
283.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
281.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
279.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
278.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
278.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
274.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
271.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
268.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
267.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
263.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
261.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
259.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
258.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
258.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
254.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
253.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
251.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
249.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
249.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
247.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
246.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
244.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
243.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
242.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
242.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
241.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
241.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
240.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
239.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
239.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
238.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
237.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
236.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
233.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
233.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
232.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
231.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
229.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
228.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
226.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
225.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
224.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
224.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
223.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
221.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
220.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
220.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
216.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
213.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
212.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
211.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
205.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
205.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
205.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
202.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
201.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
200.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
199.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
198.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
198.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
197.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
195.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
195.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
194.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
193.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
192.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
191.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
188.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
188.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
186.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
185.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
184.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
181.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
174.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
171.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
168.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
165.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
160.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
158.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
154.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
152.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
151.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
150.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
148.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
145.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
145.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
144.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
144.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
143.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
137.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
136.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
133.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
128.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
128.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
126.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
126.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
122.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
122.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
120.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
117.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
116.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
116.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
116.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
108.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
105.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
105.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
102.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
99.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
93.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
90.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
89.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
83.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
82.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
82.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
81.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
80.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
80.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
80.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
77.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
77.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
75.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
72.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
66.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
65.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
64.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
62.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
60.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
59.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
59.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
57.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
53.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
46.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.9
CPT0084560003
Tumor
0.7
CPT0012180003
Tumor
0.6
CPT0017850003
Tumor
0.5
CPT0076330003
Tumor
0.5
CPT0075560003
Tumor
0.5
CPT0023350003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0010110003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0001270001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0077320001
Normal
0.2
CPT0063630003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0010120001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0025060001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0077500001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0092800003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0066470004
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0087040003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0019160001
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0009000003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0001230001
Normal
-0.3
CPT0089460004
Tumor
-0.4
CPT0012900004
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0078660003
Tumor
-0.5
CPT0079180003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
