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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC3 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
200.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
654.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
612.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
527.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
490.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
473.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
425.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
424.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
408.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
408.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
406.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
404.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
403.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
399.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
398.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
385.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
377.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
372.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
370.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
369.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
368.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
367.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
361.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
359.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
355.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
353.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
350.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
343.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
339.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
339.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
336.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
336.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
335.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
333.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
332.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
327.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
323.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
319.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
317.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
314.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
314.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
314.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
312.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
311.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
310.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
306.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
304.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
300.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
299.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
290.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
289.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
288.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
287.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
287.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
286.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
285.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
285.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
281.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
277.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
273.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
272.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
270.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
270.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
269.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
268.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
268.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
265.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
263.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
260.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
257.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
257.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
255.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
255.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
254.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
254.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
254.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
253.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
253.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
252.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
251.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
248.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
246.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
246.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
246.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
246.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
245.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
245.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
245.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
245.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
238.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
238.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
237.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
236.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
236.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
235.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
234.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
233.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
233.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
232.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
232.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
232.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
230.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
230.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
228.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
228.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
226.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
224.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
224.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
223.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
223.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
223.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
222.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
221.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
221.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
221.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
220.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
220.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
220.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
218.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
218.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
218.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
214.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
214.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
213.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
213.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
213.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
212.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
211.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
211.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
211.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
210.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
209.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
209.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
208.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
207.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
206.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
206.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
204.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
204.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
203.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
203.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
203.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
203.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
202.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
202.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
201.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
200.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
200.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
200.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
198.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
197.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
196.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
195.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
195.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
194.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
193.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
193.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
193.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
192.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
192.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
191.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
191.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
191.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
191.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
191.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
190.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
190.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
187.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
186.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
186.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
185.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
185.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
184.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
184.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
184.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
183.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
183.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
183.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
183.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
183.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
181.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
181.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
181.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
180.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
180.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
179.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
179.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
179.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
178.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
178.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
177.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
176.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
176.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
176.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
175.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
175.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
174.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
173.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
173.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
173.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
172.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
169.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
169.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
169.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
168.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
167.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
167.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
166.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
165.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
164.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
164.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
164.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
164.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
164.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
162.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
161.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
161.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
161.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
160.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
159.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
158.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
157.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
157.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
156.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
156.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
156.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
156.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
156.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
155.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
155.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
154.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
154.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
153.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
153.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
153.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
153.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
153.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
152.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
152.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
152.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
152.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
152.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
151.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
149.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
149.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
148.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
148.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
148.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
147.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
147.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
147.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
146.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
146.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
146.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
145.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
144.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
144.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
143.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
143.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
142.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
141.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
141.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
141.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
141.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
140.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
140.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
140.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
138.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
138.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
136.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
135.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
135.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
135.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
135.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
134.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
134.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
134.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
134.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
134.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
134.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
134.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
133.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
132.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
132.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
132.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
131.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
130.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
130.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
129.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
129.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
128.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
128.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
127.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
127.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
127.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
127.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
126.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
126.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
125.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
125.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
125.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
124.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
124.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
124.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
123.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
122.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
122.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
122.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
121.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
121.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
120.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
120.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
119.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
119.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
119.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
118.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
118.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
116.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
116.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
115.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
114.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
114.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
113.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
113.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
113.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
113.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
112.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
111.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
111.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
111.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
110.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
110.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
107.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
107.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
106.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
106.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
106.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
105.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
105.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
105.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
103.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
102.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
101.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
101.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
100.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
99.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
99.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
99.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
98.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
95.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
95.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
94.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
94.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
94.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
94.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
92.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
91.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
87.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
86.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
85.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
76.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC3 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
229.5
Number of samples
231
Samples
Sample
Description
TPM
DO45285
0 years, male, NA, stage:3, alive, 480 days
780.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
600.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
578.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
572.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
560.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
541.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
527.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
487.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
485.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
481.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
474.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
462.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
460.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
449.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
438.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
427.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
424.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
418.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
413.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
413.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
397.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
395.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
391.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
381.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
379.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
376.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
373.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
371.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
369.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
367.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
366.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
363.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
357.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
344.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
335.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
332.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
322.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
321.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
313.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
307.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
306.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
305.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
305.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
301.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
301.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
299.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
294.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
294.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
292.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
292.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
292.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
291.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
290.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
289.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
289.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
287.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
286.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
282.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
282.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
280.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
279.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
276.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
275.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
274.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
268.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
267.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
267.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
265.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
261.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
259.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
259.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
257.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
256.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
254.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
251.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
251.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
250.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
249.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
247.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
244.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
243.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
242.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
240.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
239.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
238.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
238.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
236.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
234.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
232.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
232.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
230.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
229.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
229.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
229.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
227.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
225.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
223.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
223.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
222.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
222.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
222.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
221.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
221.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
220.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
220.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
218.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
216.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
215.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
213.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
212.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
210.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
209.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
209.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
209.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
208.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
206.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
204.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
201.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
198.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
192.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
192.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
191.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
189.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
188.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
188.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
187.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
186.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
186.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
186.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
184.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
183.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
183.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
183.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
182.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
182.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
182.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
178.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
177.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
177.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
176.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
176.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
175.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
171.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
169.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
169.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
169.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
169.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
168.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
168.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
165.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
165.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
164.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
164.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
162.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
162.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
161.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
161.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
161.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
161.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
161.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
159.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
157.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
157.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
157.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
156.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
156.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
154.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
152.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
152.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
151.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
150.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
148.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
148.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
145.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
145.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
144.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
144.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
142.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
140.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
137.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
137.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
136.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
135.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
135.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
135.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
134.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
134.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
134.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
134.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
134.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
133.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
132.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
132.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
131.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
128.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
128.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
127.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
127.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
126.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
126.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
125.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
125.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
125.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
123.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
122.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
119.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
119.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
117.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
116.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
115.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
114.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
112.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
111.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
109.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
107.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
105.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
102.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
102.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
102.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
100.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
95.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
94.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
93.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
92.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
91.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
89.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
88.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
87.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
75.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
74.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
67.0
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
311
Tumor
0.7
492
Normal
0.6
538
Normal
0.6
211
Tumor
0.6
917
Tumor
0.6
536
Normal
0.5
524
Normal
0.5
963
Tumor
0.5
1031
Tumor
0.5
415
Tumor
0.5
966
Normal
0.5
724
Normal
0.5
434
Normal
0.5
425
Tumor
0.5
126
Normal
0.5
713
Tumor
0.4
455
Tumor
0.4
721
Tumor
0.4
444
Normal
0.4
478
Normal
0.4
975
Tumor
0.4
863
Tumor
0.4
978
Normal
0.4
212
Normal
0.4
916
Normal
0.4
283
Tumor
0.4
528
Normal
0.4
976
Normal
0.4
421
Tumor
0.4
223
Tumor
0.3
213
Tumor
0.3
852
Normal
0.3
188
Normal
0.3
1028
Normal
0.3
545
Tumor
0.3
516
Normal
0.3
686
Normal
0.3
128
Normal
0.3
954
Normal
0.3
661
Tumor
0.3
823
Tumor
0.3
498
Normal
0.3
192
Normal
0.3
125
Tumor
0.3
743
Tumor
0.3
716
Normal
0.3
491
Tumor
0.3
943
Tumor
0.3
146
Normal
0.3
517
Tumor
0.3
297
Tumor
0.3
958
Normal
0.3
384
Normal
0.3
813
Tumor
0.3
185
Tumor
0.3
723
Tumor
0.2
494
Normal
0.2
1042
Normal
0.2
814
Normal
0.2
1022
Normal
0.2
224
Normal
0.2
362
Normal
0.2
447
Tumor
0.2
114
Normal
0.2
1044
Normal
0.2
383
Tumor
0.2
1032
Normal
0.2
363
Tumor
0.2
952
Normal
0.2
518
Normal
0.2
955
Tumor
0.2
881
Tumor
0.2
728
Normal
0.2
124
Normal
0.2
984
Normal
0.2
968
Normal
0.2
111
Normal
0.2
284
Normal
0.2
131
Tumor
0.2
738
Normal
0.2
527
Tumor
0.2
424
Normal
0.2
217
Tumor
0.2
474
Normal
0.2
432
Normal
0.2
1026
Normal
0.2
262
Normal
0.2
925
Tumor
0.2
558
Normal
0.2
483
Tumor
0.2
525
Tumor
0.2
268
Normal
0.2
744
Normal
0.2
138
Normal
0.2
422
Normal
0.2
272
Normal
0.2
918
Normal
0.2
816
Normal
0.2
1046
Normal
0.2
127
Tumor
0.2
427
Tumor
0.2
641
Tumor
0.2
428
Normal
0.2
696
Normal
0.2
867
Tumor
0.2
488
Normal
0.2
467
Tumor
0.2
344
Normal
0.2
817
Tumor
0.2
461
Tumor
0.2
535
Tumor
0.2
944
Normal
0.2
563
Tumor
0.2
343
Tumor
0.2
851
Tumor
0.2
824
Normal
0.2
385
Tumor
0.2
412
Normal
0.2
481
Tumor
0.2
514
Normal
0.2
214
Normal
0.2
956
Normal
0.2
778
Normal
0.1
864
Normal
0.1
482
Normal
0.1
914
Normal
0.1
375
Tumor
0.1
1043
Tumor
0.1
135
Tumor
0.1
698
Normal
0.1
356
Normal
0.1
534
Normal
0.1
471
Tumor
0.1
493
Tumor
0.1
1045
Tumor
0.1
964
Normal
0.1
722
Normal
0.1
982
Normal
0.1
742
Normal
0.1
858
Normal
0.1
271
Tumor
0.1
573
Tumor
0.1
874
Normal
0.1
737
Tumor
0.1
136
Normal
0.1
484
Normal
0.1
878
Normal
0.1
617
Tumor
0.1
195
Tumor
0.1
1021
Tumor
0.1
515
Tumor
0.1
697
Tumor
0.1
685
Tumor
0.1
468
Normal
0.1
574
Normal
0.1
926
Normal
0.1
714
Normal
0.1
142
Normal
0.1
462
Normal
0.1
857
Tumor
0.1
218
Normal
0.1
191
Tumor
0.1
137
Tumor
0.1
312
Normal
0.1
497
Tumor
0.1
1015
Tumor
0.1
866
Normal
0.1
472
Normal
0.1
364
Normal
0.1
433
Tumor
0.1
913
Tumor
0.1
924
Normal
0.1
367
Tumor
0.1
141
Tumor
0.1
938
Normal
0.1
416
Normal
0.1
628
Normal
0.1
395
Tumor
0.1
546
Normal
0.1
862
Normal
0.1
715
Tumor
0.1
554
Normal
0.1
414
Normal
0.1
868
Normal
0.1
1016
Normal
0.1
1014
Normal
0.1
352
Normal
0.1
662
Normal
0.1
187
Tumor
0.1
446
Normal
0.1
815
Tumor
0.1
355
Tumor
0.1
443
Tumor
0.1
358
Normal
0.1
327
Tumor
0.0
448
Normal
0.0
922
Normal
0.0
436
Normal
0.0
745
Tumor
0.0
228
Normal
0.0
365
Tumor
0.0
818
Normal
0.0
386
Normal
0.0
113
Tumor
0.0
882
Normal
0.0
664
Normal
0.0
162
Normal
0.0
884
Normal
0.0
376
Normal
0.0
1041
Tumor
0.0
786
Normal
0.0
553
Tumor
0.0
616
Normal
0.0
537
Tumor
0.0
672
Normal
0.0
526
Normal
0.0
466
Normal
0.0
861
Tumor
0.0
636
Normal
0.0
278
Normal
0.0
921
Tumor
0.0
983
Tumor
0.0
877
Tumor
0.0
445
Tumor
0.0
426
Normal
0.0
883
Tumor
0.0
227
Tumor
0.0
221
Tumor
0.0
145
Tumor
0.0
746
Normal
0.0
286
Normal
0.0
172
Normal
0.0
328
Normal
0.0
671
Tumor
0.0
912
Normal
0.0
354
Normal
0.0
394
Normal
0.0
755
Tumor
0.0
435
Tumor
0.0
1025
Tumor
0.0
332
Normal
0.0
477
Tumor
0.0
487
Tumor
0.0
873
Tumor
0.0
196
Normal
0.0
564
Normal
0.0
456
Normal
0.0
977
Tumor
0.0
298
Normal
0.0
392
Normal
-0.1
756
Normal
-0.1
232
Normal
-0.1
937
Tumor
-0.1
951
Tumor
-0.1
257
Tumor
-0.1
642
Normal
-0.1
342
Normal
-0.1
648
Normal
-0.1
413
Tumor
-0.1
147
Tumor
-0.1
463
Tumor
-0.1
618
Normal
-0.1
423
Tumor
-0.1
366
Normal
-0.1
258
Normal
-0.1
148
Normal
-0.1
132
Normal
-0.1
568
Normal
-0.1
396
Normal
-0.1
523
Tumor
-0.1
112
Tumor
-0.1
567
Tumor
-0.1
666
Normal
-0.1
331
Tumor
-0.1
186
Normal
-0.1
368
Normal
-0.1
314
Normal
-0.1
572
Normal
-0.1
171
Tumor
-0.1
285
Tumor
-0.1
473
Tumor
-0.1
464
Normal
-0.1
261
Tumor
-0.1
627
Tumor
-0.2
353
Tumor
-0.2
387
Tumor
-0.2
727
Tumor
-0.2
695
Tumor
-0.2
341
Tumor
-0.2
741
Tumor
-0.2
431
Tumor
-0.2
615
Tumor
-0.2
222
Normal
-0.2
923
Tumor
-0.2
231
Tumor
-0.2
452
Normal
-0.2
967
Tumor
-0.2
451
Tumor
-0.2
277
Tumor
-0.2
785
Tumor
-0.2
513
Tumor
-0.2
557
Tumor
-0.2
915
Tumor
-0.2
361
Tumor
-0.2
953
Tumor
-0.2
647
Tumor
-0.3
357
Tumor
-0.3
388
Normal
-0.3
123
Tumor
-0.3
777
Tumor
-0.3
571
Tumor
-0.3
663
Tumor
-0.3
161
Tumor
-0.3
391
Tumor
-0.3
911
Tumor
-0.3
957
Tumor
-0.3
1027
Tumor
-0.3
865
Tumor
-0.3
351
Tumor
-0.3
533
Tumor
-0.4
267
Tumor
-0.4
665
Tumor
-0.4
313
Tumor
-0.4
465
Tumor
-0.4
411
Tumor
-0.4
1013
Tumor
-0.4
981
Tumor
-0.4
635
Tumor
-0.5
393
Tumor
-0.6
965
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.