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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KRT18 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
728.7
Number of samples
349
Samples
Sample
Description
TPM
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
3182.7
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
2695.4
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
2599.4
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
2206.8
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
2198.5
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
2160.7
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
2008.4
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
1949.7
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1886.5
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1878.3
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1850.9
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
1836.9
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1816.9
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
1781.8
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1747.6
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1747.0
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1739.6
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
1659.7
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
1631.0
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
1604.9
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1577.7
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1488.7
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1452.0
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
1445.3
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
1437.0
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1435.7
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1424.2
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
1398.2
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
1398.1
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1393.1
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
1389.0
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
1381.2
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1372.3
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1368.2
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1341.1
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
1325.0
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
1314.3
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1272.3
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1268.9
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1266.8
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1265.6
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1255.7
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1247.6
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1245.9
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1234.4
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
1233.5
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1198.0
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1162.8
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1153.9
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
1145.5
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1144.2
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1128.5
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
1100.6
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1098.1
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1076.4
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1066.5
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
1065.0
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1056.5
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1051.6
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1048.9
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1048.3
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
1047.8
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1035.1
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1033.5
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1013.2
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1013.0
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1012.9
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
995.4
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
991.3
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
987.3
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
982.9
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
979.3
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
978.4
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
975.0
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
967.0
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
966.6
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
965.5
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
964.3
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
963.0
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
945.7
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
919.4
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
916.0
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
912.9
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
911.4
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
905.4
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
904.6
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
902.9
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
902.3
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
894.7
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
891.2
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
879.6
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
877.3
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
873.1
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
864.5
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
864.1
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
861.9
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
855.8
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
838.1
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
835.0
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
831.4
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
831.2
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
827.9
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
825.3
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
825.2
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
820.2
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
817.7
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
816.8
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
815.9
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
815.8
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
805.0
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
804.0
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
803.2
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
795.0
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
783.1
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
782.1
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
782.0
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
779.7
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
776.3
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
774.3
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
771.6
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
768.1
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
767.9
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
766.7
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
765.6
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
765.5
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
763.0
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
762.7
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
758.7
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
754.7
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
752.9
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
751.0
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
748.0
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
747.5
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
745.3
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
737.6
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
735.4
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
726.1
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
716.7
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
713.5
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
709.7
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
703.3
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
700.1
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
697.4
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
694.5
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
690.3
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
686.5
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
686.1
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
684.6
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
682.4
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
678.9
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
678.2
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
674.3
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
670.1
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
667.9
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
667.3
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
664.1
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
656.3
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
651.2
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
650.8
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
647.8
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
646.8
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
646.0
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
644.4
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
644.0
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
642.5
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
641.6
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
641.5
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
641.3
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
637.1
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
636.6
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
635.6
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
634.8
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
634.4
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
632.8
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
630.1
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
627.3
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
627.2
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
627.1
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
626.2
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
625.0
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
621.7
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
620.1
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
616.1
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
610.3
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
595.8
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
594.8
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
590.2
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
585.1
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
580.3
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
577.8
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
574.1
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
574.1
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
572.3
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
570.6
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
568.5
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
566.5
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
563.6
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
563.3
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
562.2
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
557.2
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
556.4
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
554.4
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
553.0
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
552.8
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
550.6
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
549.1
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
549.1
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
547.4
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
545.8
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
539.9
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
539.7
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
538.2
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
531.6
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
530.9
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
526.6
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
523.8
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
522.3
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
519.7
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
518.6
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
508.2
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
507.3
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
507.0
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
506.0
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
503.2
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
501.4
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
501.1
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
500.8
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
500.6
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
496.7
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
495.4
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
495.1
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
494.4
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
491.9
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
490.0
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
486.0
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
485.0
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
482.5
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
482.1
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
481.2
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
477.0
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
473.0
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
471.9
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
471.0
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
469.2
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
466.2
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
465.2
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
461.3
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
459.3
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
457.5
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
455.9
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
455.8
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
455.7
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
450.2
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
441.6
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
437.7
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
437.3
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
431.6
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
431.1
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
429.3
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
426.8
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
426.5
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
426.3
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
425.8
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
424.7
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
422.6
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
421.6
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
419.3
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
415.3
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
413.8
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
408.4
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
404.4
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
399.4
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
395.7
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
393.9
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
387.9
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
387.8
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
384.9
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
383.7
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
383.4
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
382.6
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
381.9
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
379.9
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
378.2
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
375.4
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
372.7
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
370.8
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
368.7
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
366.7
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
361.4
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
359.6
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
358.7
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
358.6
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
358.0
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
352.7
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
346.8
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
346.2
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
345.4
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
340.8
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
339.0
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
335.1
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
334.9
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
332.5
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
330.5
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
321.0
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
316.7
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
310.8
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
308.8
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
307.4
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
305.0
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
299.7
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
297.5
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
297.2
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
294.2
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
293.8
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
293.2
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
286.7
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
285.4
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
284.0
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
281.8
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
281.2
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
281.0
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
278.4
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
277.9
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
275.0
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
270.0
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
268.9
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
258.3
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
254.4
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
247.4
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
243.9
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
242.5
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
224.1
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
223.9
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
217.9
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
216.3
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
213.7
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
205.3
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
202.1
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
196.4
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
194.5
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
192.0
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
172.8
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
166.5
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
135.2
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
109.7
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
105.7
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
104.8
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
96.7
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KRT18 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
638.8
Number of samples
81
Samples
Sample
Description
TPM
DO46329
0 years, female, NA, stage:III, dead, 1699 days
2705.4
DO46453
0 years, female, NA, stage:III, dead, 3294 days
2396.0
DO46533
0 years, female, NA, stage:III, alive, 3667 days
1991.4
DO46333
0 years, female, NA, stage:III, dead, 359 days
1771.3
DO46331
0 years, female, NA, stage:III, dead, 612 days
1520.4
DO46378
0 years, female, NA, stage:III, alive, 843 days
1462.7
DO46366
0 years, female, NA, stage:III, dead, 2054 days
1418.5
DO46404
0 years, female, NA, stage:III, dead, 690 days
1104.2
DO46551
0 years, female, NA, stage:III, dead, 1055 days
1068.4
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1039.1
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1026.8
DO46611
0 years, female, NA, stage:III, dead, 734 days
970.1
DO46372
0 years, female, NA, stage:III, dead, 1326 days
947.9
DO46408
0 years, female, NA, stage:III, dead, 489 days
860.9
DO46597
0 years, female, NA, stage:III, dead, 393 days
856.6
DO46463
0 years, female, NA, stage:III, dead, 2451 days
848.1
DO46370
0 years, female, NA, stage:III, dead, 1727 days
831.9
DO46352
0 years, female, NA, stage:III, dead, 677 days
798.1
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
790.6
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
780.4
DO46376
0 years, female, NA, stage:III, dead, 1430 days
762.0
DO46568
0 years, female, NA, stage:III, dead, 320 days
742.4
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
741.2
DO46560
0 years, female, NA, stage:IV, dead, 286 days
724.3
DO46538
0 years, female, NA, stage:III, dead, 1527 days
715.3
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
690.9
DO46344
0 years, female, NA, stage:III, dead, 642 days
668.1
DO46384
0 years, female, NA, stage:III, dead, 614 days
656.6
DO46368
0 years, female, NA, stage:III, dead, 2879 days
615.7
DO46327
0 years, female, NA, stage:III, dead, 184 days
610.4
DO46581
0 years, female, NA, stage:III, dead, 408 days
580.8
DO46591
0 years, female, NA, stage:III, dead, 195 days
580.2
DO46586
0 years, female, NA, stage:III, dead, 1019 days
578.6
DO46326
0 years, female, NA, stage:III, dead, 701 days
575.1
DO46390
0 years, female, NA, stage:III, dead, 374 days
570.6
DO46392
0 years, female, NA, stage:III, dead, 628 days
570.2
DO46443
0 years, female, NA, stage:III, dead, 2464 days
553.1
DO46528
0 years, female, NA, stage:III, alive, 6139 days
532.8
DO46346
0 years, female, NA, stage:III, dead, 1187 days
525.7
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
522.8
DO46508
0 years, female, NA, stage:III, dead, 2101 days
511.5
DO46432
0 years, female, NA, stage:III, alive, 2218 days
495.7
DO46325
0 years, female, NA, stage:III, dead, 477 days
474.4
DO46396
0 years, female, NA, stage:III, dead, 583 days
473.4
DO46342
0 years, female, NA, stage:III, dead, 1398 days
472.0
DO46448
0 years, female, NA, stage:III, dead, 654 days
468.0
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
467.5
DO46561
0 years, female, NA, stage:III, dead, 195 days
457.3
DO46364
0 years, female, NA, stage:III, dead, 806 days
450.1
DO46412
0 years, female, NA, stage:III, dead, 597 days
445.3
DO46388
0 years, female, NA, stage:III, dead, 413 days
439.9
DO46330
0 years, female, NA, stage:III, dead, 684 days
430.8
DO46348
0 years, female, NA, stage:IV, dead, 287 days
417.8
DO46382
0 years, female, NA, stage:IV, dead, 311 days
403.1
DO46566
0 years, female, NA, stage:III, dead, 673 days
388.4
DO46350
0 years, female, NA, stage:III, dead, 886 days
365.5
DO46340
0 years, female, NA, stage:III, dead, 616 days
365.4
DO46356
0 years, female, NA, stage:III, dead, 911 days
363.1
DO46362
0 years, female, NA, stage:III, dead, 1639 days
362.8
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
361.4
DO46354
0 years, female, NA, stage:III, dead, 843 days
352.4
DO46398
0 years, female, NA, stage:III, alive, 437 days
346.2
DO46328
0 years, female, NA, stage:III, dead, 972 days
340.1
DO46468
0 years, female, NA, stage:III, alive, 2776 days
337.4
DO46436
0 years, female, NA, stage:III, alive, 3193 days
333.1
DO46336
0 years, female, NA, stage:IV, dead, 664 days
330.1
DO46386
0 years, female, NA, stage:III, dead, 1162 days
321.1
DO46576
0 years, female, NA, stage:III, alive, 133 days
311.4
DO46588
0 years, female, NA, stage:III, dead, 438 days
305.3
DO46332
0 years, female, NA, stage:III, dead, 689 days
290.5
DO46402
0 years, female, NA, stage:III, dead, 511 days
288.5
DO46518
0 years, female, NA, stage:III, alive, 2960 days
271.3
DO46358
0 years, female, NA, stage:III, dead, 423 days
262.7
DO46338
0 years, female, NA, stage:III, dead, 596 days
234.9
DO46493
0 years, female, NA, stage:IV, alive, 839 days
227.3
DO46400
0 years, female, NA, stage:III, dead, 719 days
211.1
DO46571
0 years, female, NA, stage:III, dead, 243 days
170.3
DO46374
0 years, female, NA, stage:III, dead, 1409 days
164.3
DO46606
0 years, female, NA, stage:III, alive, 804 days
146.5
DO46334
0 years, female, NA, stage:III, dead, 496 days
110.1
DO46602
0 years, female, NA, stage:III, dead, 205 days
71.1
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
1.9
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
1.8
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
1.8
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
1.4
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
1.4
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
1.2
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
1.2
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
1.2
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
1.1
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
1.0
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
1.0
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
1.0
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.9
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.9
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.9
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.9
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.8
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.8
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.7
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.7
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.7
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.7
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.7
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.7
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.7
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.7
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.7
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.6
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.6
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.6
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.6
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.5
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.5
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.5
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.5
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.5
1db5574d-aca7-403c-8100-6e705f_D2
Normal
0.5
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.5
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.5
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.5
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.4
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.4
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.4
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.4
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.4
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.3
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.3
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.2
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.2
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.2
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.2
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.2
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.2
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.1
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.1
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.1
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.1
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.1
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.1
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.1
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.0
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.0
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.0
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.0
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.0
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.1
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.1
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.1
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.1
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.1
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.2
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.2
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.2
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.3
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.3
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.3
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.3
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.4
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.4
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.4
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.4
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.4
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.4
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-0.4
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.4
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.5
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.5
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.5
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.5
15524912-685a-47ce-a824-567848_D2
Tumor
-0.6
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.6
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.6
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.6
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-0.6
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.6
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.6
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.6
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.7
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.7
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.7
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.7
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.7
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.8
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.9
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.9
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-1.0
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.