HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:20.4 nTPM
HPA Brain:53.6 nTPM
GTEx:20.4 nTPM
FANTOM5:70.4 Scaled Tags Per Million
Pig:48.0 nTPM
Mouse:43.8 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 53.6
Sample id Sample description nTPM
Hippocampus
nTPM: 51.1
1898 Male, age 80, left hemisphere 55.8
2529 Female, age 94, left hemisphere 55.6
2148 Female, age 91, left hemisphere 52.2
1855 Male, age 76, left hemisphere 50.6
1911 Female, age 85, right hemisphere 47.8
2621 Female, age 67, right hemisphere 44.3
Dentate gyrus
nTPM: 50.1
2010 Male, age 76, both hemispheres 56.3
2530 Female, age 94, left hemisphere 55.2
2246 Female, age 85, both hemispheres 52.8
2528 Male, age 74, both hemispheres 48.6
1927 Female, age 91, both hemispheres 47.0
2531 Female, age 67, both hemispheres 40.6
Entorhinal gyrus
nTPM: 49.1
1938 Female, age 85, left hemisphere 54.0
1787 Male, age 76, left hemisphere 52.7
2117 Female, age 91, right hemisphere 52.6
2764 Male, age 80, right hemisphere 49.2
2686 Male, age 75, right hemisphere 43.8
2613 Female, age 94, left hemisphere 42.5
Hippocampus, CA1
nTPM: 52.0
2749 Male, age 80, left hemisphere 60.7
1873 Female, age 85, both hemispheres 53.0
2527 Male, age 74, both hemispheres 51.0
2045 Male, age 76, both hemispheres 47.7
2082 Female, age 91, right hemisphere 47.6
Hippocampus, CA2
nTPM: 53.6
1892 Male, age 76, both hemispheres 66.5
1963 Male, age 80, left hemisphere 61.5
2249 Male, age 74, both hemispheres 50.6
2113 Female, age 91, right hemisphere 49.5
1940 Female, age 85, left hemisphere 48.2
2437 Female, age 94, left hemisphere 45.1
Hippocampus, CA3
nTPM: 51.1
1867 Male, age 76, both hemispheres 63.0
2137 Male, age 80, left hemisphere 55.8
2436 Male, age 74, both hemispheres 49.2
1891 Female, age 85, both hemispheres 48.4
2861 Female, age 67, both hemispheres 46.2
2620 Female, age 94, left hemisphere 43.9
Parahippocampal cortex
nTPM: 47.0
1933 Female, age 85, both hemispheres 52.3
2692 Male, age 74, both hemispheres 48.1
1850 Male, age 80, both hemispheres 47.7
2250 Female, age 67, right hemisphere 47.5
2532 Female, age 72, left hemisphere 47.4
2245 Female, age 91, both hemispheres 47.2
1990 Female, age 91, right hemisphere 46.5
2018 Male, age 76, both hemispheres 45.8
2622 Female, age 67, right hemisphere 44.3
2693 Female, age 94, both hemispheres 42.9
Perirhinal gyrus
nTPM: 48.2
1847 Female, age 91, left hemisphere 52.1
1841 Female, age 85, right hemisphere 50.8
2848 Male, age 76, right hemisphere 48.4
1794 Male, age 80, right hemisphere 45.7
2521 Female, age 94, right hemisphere 43.8
Subiculum
nTPM: 48.7
1977 Female, age 85, both hemispheres 51.2
2042 Male, age 76, both hemispheres 50.2
1901 Male, age 80, both hemispheres 48.9
2619 Male, age 74, both hemispheres 48.3
2729 Female, age 91, right hemisphere 47.7
2438 Female, age 94, left hemisphere 45.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.4
Samples: 197

Max nTPM: 33.2
Min nTPM: 10.6
Std nTPM: 3.3
Median nTPM: 20.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 33.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 32.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 29.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 29.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 27.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 27.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 27.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 27.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 26.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 26.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 26.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 70.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.4
FF:10153-102I9 76 years, female 80.6
FF:10169-103B7 60 years, female 60.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 48.0
Pig sample Sample description nTPM
Subiculum
nTPM: 44.2
Samples: 4

Max nTPM: 49.1
Min nTPM: 41.9
Sample A Female 49.1
Sample B Female 41.9
Sample C Male 43.7
Sample D Male 42.0
Dorsal hippocampus
nTPM: 48.0
Samples: 4

Max nTPM: 57.3
Min nTPM: 36.3
Sample A Female 57.3
Sample B Female 55.8
Sample C Male 42.7
Sample D Male 36.3
Entorhinal cortex
nTPM: 42.6
Samples: 4

Max nTPM: 48.1
Min nTPM: 35.6
Sample A Female 46.0
Sample B Female 40.6
Sample C Male 48.1
Sample D Male 35.6
Ventral hippocampus
nTPM: 47.7
Samples: 4

Max nTPM: 55.8
Min nTPM: 37.0
Sample A Female 45.2
Sample B Female 37.0
Sample C Male 55.8
Sample D Male 52.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 43.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.5
Samples: 4

Max nTPM: 45.3
Min nTPM: 37.3
Sample A Male 37.3
Sample B Male 37.3
Sample C Female 41.9
Sample D Female 45.3
Hippocampal formation
nTPM: 43.8
Samples: 4

Max nTPM: 51.1
Min nTPM: 40.7
Sample A Male 41.5
Sample B Male 40.7
Sample C Female 51.1
Sample D Female 41.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
73732149 Antisense, RP_051121_04_A07, Mouse strain C57BL/6J (56 days, male) 7.1
70474929 Antisense, RP_050623_01_D07, Mouse strain C57BL/6J (56 days, male) 4.6
68151390 Antisense, RP_041116_01_B01, Mouse strain C57BL/6J (56 days, male) 2.8
73930854 Antisense, RP_051214_04_D07, Mouse strain C57BL/6J (56 days, male) 0.7

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