AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.9 nTPM
HPA Brain:54.8 nTPM
GTEx:21.9 nTPM
FANTOM5:77.2 Scaled Tags Per Million
Pig:40.1 nTPM
Mouse:40.3 nTPM
Allen mouse:2.8 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi 54.8
Sample id Sample description nTPM
Amygdala
nTPM: 54.4
2695 Female, age 67, right hemisphere 59.4
2517 Female, age 94, left hemisphere 58.9
2514 Male, age 75, right hemisphere 56.0
1987 Female, age 91, left hemisphere 52.0
2814 Male, age 76, right hemisphere 45.7
Basal amygdala
nTPM: 51.6
2609 Male, age 75, right hemisphere 64.6
2243 Female, age 91, right hemisphere 52.9
2827 Female, age 67, right hemisphere 50.1
2110 Male, age 80, left hemisphere 48.2
2685 Female, age 94, left hemisphere 47.2
1955 Male, age 76, both hemispheres 46.5
Central amygdala
nTPM: 53.3
2515 Male, age 75, right hemisphere 62.6
2826 Female, age 94, left hemisphere 57.3
2239 Male, age 80, left hemisphere 51.7
2701 Female, age 91, right hemisphere 50.3
1905 Male, age 76, both hemispheres 44.5
Corticomedial amygdala
nTPM: 51.7
2428 Male, age 75, right hemisphere 66.0
2240 Male, age 76, both hemispheres 50.6
2829 Male, age 80, left hemisphere 49.9
2242 Female, age 91, right hemisphere 49.7
2429 Female, age 94, left hemisphere 49.5
2535 Female, age 67, right hemisphere 44.6
Lateral amygdala
nTPM: 54.8
2516 Male, age 75, right hemisphere 66.0
2830 Female, age 67, right hemisphere 59.3
2534 Female, age 94, left hemisphere 54.9
2255 Female, age 91, right hemisphere 52.1
2256 Male, age 80, left hemisphere 51.2
1883 Male, age 76, both hemispheres 45.3

AMYGDALA - GTEx RNA-seqi
Max subtype nTPMi 21.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 21.9
Samples: 152

Max nTPM: 35.0
Min nTPM: 13.7
Std nTPM: 4.0
Median nTPM: 21.0
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 35.0
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 34.7
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 34.6
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 34.5
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 34.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 33.5
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 32.5
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 32.0
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 29.4
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 28.8
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 27.6
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AMYGDALA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 77.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 77.2
FF:10151-102I7 76 years, female 77.2

AMYGDALA - Pig RNA-seqi
Max subtype nTPMi 40.1
Pig sample Sample description nTPM
Amygdala
nTPM: 40.1
Samples: 4

Max nTPM: 49.3
Min nTPM: 33.7
Sample A Female 49.3
Sample B Female 33.7
Sample C Male 38.6
Sample D Male 38.9

AMYGDALA - Mouse RNA-seqi
Max subtype nTPMi 40.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 40.3
Samples: 4

Max nTPM: 42.2
Min nTPM: 37.0
Sample A Male 40.1
Sample B Male 37.0
Sample C Female 42.2
Sample D Female 42.0

AMYGDALA - Allen Mouse ISHi
Max subtype Expression energyi 2.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.8
73732149 Antisense, RP_051121_04_A07, Mouse strain C57BL/6J (56 days, male) 5.6
70474929 Antisense, RP_050623_01_D07, Mouse strain C57BL/6J (56 days, male) 3.1
68151390 Antisense, RP_041116_01_B01, Mouse strain C57BL/6J (56 days, male) 2.4
73930854 Antisense, RP_051214_04_D07, Mouse strain C57BL/6J (56 days, male) 0.1

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