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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCIRG1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
57.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
40.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
38.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
21.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
20.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
19.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
19.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
17.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
17.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
16.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
15.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
15.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
14.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
12.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
9.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
9.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
8.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
7.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
7.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
6.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
6.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
5.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
3.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
2.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
1.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCIRG1 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
63.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
58.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
48.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
47.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
46.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
44.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
41.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
41.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
40.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
38.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
38.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
38.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
37.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
36.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
35.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
35.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
35.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
35.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
34.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
34.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
33.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
33.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
31.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
31.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
31.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
31.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
31.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
30.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
30.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
30.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
29.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
29.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
29.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
29.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
29.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
28.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
28.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
28.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
27.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
27.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
27.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
27.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
27.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
26.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
26.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
26.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
26.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
26.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
26.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
26.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
26.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
25.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
25.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
25.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
24.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
24.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
24.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
24.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
23.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
23.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
23.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
23.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
22.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
22.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
22.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
22.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
22.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
22.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
22.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
21.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
21.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
21.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
21.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
21.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
21.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
21.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
21.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
21.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
21.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
21.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
20.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
20.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
20.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
20.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
20.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
20.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
20.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
19.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
19.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
19.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
19.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
19.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
19.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
19.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
19.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
18.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
18.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
18.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
18.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
18.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
18.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
18.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
17.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
17.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
17.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
17.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
17.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
16.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
16.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
16.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
15.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
15.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
15.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
15.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
14.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
14.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
14.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
14.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
14.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
14.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
13.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
13.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
13.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
13.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
12.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
12.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
12.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
12.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
12.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
12.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
11.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
11.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
11.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
11.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
11.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
10.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
10.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
10.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
10.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
10.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
10.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
10.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
10.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
9.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
9.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
9.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
9.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
9.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
9.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
9.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
9.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
9.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
9.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
9.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
9.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
9.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
8.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
8.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
8.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
8.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
8.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
8.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
8.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
8.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
8.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
8.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
8.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
8.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
7.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
7.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
7.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
7.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
7.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
7.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
7.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
7.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
7.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
7.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
7.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
6.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
6.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
6.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
6.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
6.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
6.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
6.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
6.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
5.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
5.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
5.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
5.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
5.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
4.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
4.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
4.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
4.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
4.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
4.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
3.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
3.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCIRG1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
88.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
76.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
71.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
65.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
61.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
60.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
58.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
56.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
56.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
55.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
52.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
52.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
50.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
47.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
46.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
45.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
44.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
43.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
43.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
42.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
40.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
40.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
40.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
40.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
39.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
39.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
37.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
36.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
36.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
35.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
35.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
35.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
34.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
33.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
33.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
31.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
31.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
30.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
29.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
29.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
29.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
28.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
28.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
28.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
27.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
27.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
27.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
26.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
26.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
26.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
25.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
25.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
24.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
24.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
24.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
24.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
24.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
24.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
23.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
23.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
23.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
22.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
21.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
21.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
20.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
20.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
19.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
18.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
16.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
16.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
12.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
11.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCIRG1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
491.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
148.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
97.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
95.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
67.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
63.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
58.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
44.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
43.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
43.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
42.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
41.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
40.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
39.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
35.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
34.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
34.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
33.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
33.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
33.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
32.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
30.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
30.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
30.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
28.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
28.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
27.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
26.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
26.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
25.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
25.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
25.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
24.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
24.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
23.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
22.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
22.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
22.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
21.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
21.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
21.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
20.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
19.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
19.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
19.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
17.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
17.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
16.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
15.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
15.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
15.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
14.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
14.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
14.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
14.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
14.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
13.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
12.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
12.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
12.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
12.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
11.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
11.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
11.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
11.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
11.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
10.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
10.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
10.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
10.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
10.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
10.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
10.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
10.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
9.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
9.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
9.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
9.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
8.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
8.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
8.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
8.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
8.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
8.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
7.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
7.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
7.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
7.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
7.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
7.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
7.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
7.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
7.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
7.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
7.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
7.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
6.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
6.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
6.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
6.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
5.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
5.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
5.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
5.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
4.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
4.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
4.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
3.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
3.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
2.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
1.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
1.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
2.5
CPT0076330003
Tumor
2.1
CPT0079180003
Tumor
1.3
CPT0088550004
Tumor
1.1
CPT0023350003
Tumor
1.1
CPT0000640003
Tumor
1.0
CPT0081880003
Tumor
1.0
CPT0024670003
Tumor
1.0
CPT0014160003
Tumor
0.9
CPT0089020003
Tumor
0.8
CPT0086360003
Tumor
0.8
CPT0025050003
Tumor
0.8
CPT0001260009
Tumor
0.8
CPT0079410003
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0001500009
Tumor
0.7
CPT0020120003
Tumor
0.7
CPT0063630003
Tumor
0.7
CPT0064370003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0084560003
Tumor
0.6
CPT0065430003
Tumor
0.6
CPT0086030003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0078660003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0006900003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0086820003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0078930003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0021240003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0088690003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0014370004
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0071150004
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0088900003
Tumor
-0.3
CPT0088640003
Normal
-0.3
CPT0011410003
Tumor
-0.3
CPT0001550001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0012080003
Tumor
-0.3
CPT0023360001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0075720003
Tumor
-0.3
CPT0001190001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0079510001
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0076350001
Normal
-0.4
CPT0079430001
Normal
-0.4
CPT0002370001
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0092740003
Normal
-0.5
CPT0065870003
Tumor
-0.5
CPT0017450001
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0063640001
Normal
-0.5
CPT0020020001
Normal
-0.5
CPT0082010001
Normal
-0.5
CPT0017410003
Tumor
-0.5
CPT0006530001
Normal
-0.5
CPT0009020003
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0000890001
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0063330001
Normal
-0.5
CPT0089040001
Normal
-0.5
CPT0092310003
Normal
-0.5
CPT0012090003
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0006730001
Normal
-0.5
CPT0001350001
Normal
-0.5
CPT0010120001
Normal
-0.5
CPT0018250001
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0014130001
Normal
-0.6
CPT0020130001
Normal
-0.6
CPT0014350001
Normal
-0.6
CPT0025060001
Normal
-0.6
CPT0023710001
Normal
-0.6
CPT0025110003
Tumor
-0.6
CPT0081620001
Normal
-0.6
CPT0089480003
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0081990003
Tumor
-0.6
CPT0078530001
Normal
-0.6
CPT0012920003
Normal
-0.6
CPT0011240003
Tumor
-0.6
CPT0012900004
Tumor
-0.6
CPT0012770003
Normal
-0.6
CPT0007870001
Normal
-0.7
CPT0086890003
Normal
-0.7
CPT0088500001
Normal
-0.7
CPT0078840001
Normal
-0.7
CPT0025610001
Normal
-0.7
CPT0075570001
Normal
-0.7
CPT0009080003
Normal
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
