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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CD81 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
716.3
Number of samples
349
Samples
Sample
Description
TPM
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
3539.0
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
3034.9
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
2423.3
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
2406.3
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
2395.3
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
2171.3
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
2144.7
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1970.3
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
1952.8
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1887.7
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1857.9
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1854.4
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1829.5
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
1648.3
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1583.7
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
1566.9
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1563.7
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
1556.2
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1544.1
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1513.8
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1487.5
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
1461.4
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1437.9
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1402.9
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1398.8
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1366.5
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
1341.4
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1339.7
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1337.9
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1321.0
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
1316.6
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
1298.7
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1272.0
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1260.8
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1257.4
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
1255.6
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
1254.8
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1254.2
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1239.7
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1189.0
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
1173.9
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
1173.4
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1168.9
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
1163.0
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1152.2
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1150.6
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
1148.4
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
1138.1
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1135.0
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
1119.0
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
1097.5
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
1096.4
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1090.2
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
1086.5
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1085.0
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1073.9
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
1068.6
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1056.4
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1033.3
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
1023.9
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1018.7
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
1013.2
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1004.6
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1001.5
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
994.5
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
985.5
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
974.2
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
968.4
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
947.6
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
943.7
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
941.8
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
941.2
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
941.0
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
940.9
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
935.5
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
926.7
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
924.7
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
923.9
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
912.9
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
912.0
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
904.4
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
892.1
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
890.3
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
885.8
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
884.2
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
881.6
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
876.8
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
864.3
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
860.4
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
857.0
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
852.7
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
849.8
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
849.4
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
845.2
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
839.9
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
838.4
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
823.9
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
808.3
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
805.7
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
803.8
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
801.9
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
798.6
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
792.1
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
791.3
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
777.3
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
774.2
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
768.9
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
768.7
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
758.1
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
757.7
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
751.7
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
751.6
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
750.6
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
749.6
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
744.0
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
741.2
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
737.0
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
733.7
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
733.0
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
729.0
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
728.8
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
727.2
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
714.3
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
709.5
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
709.4
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
709.4
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
708.8
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
707.3
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
707.0
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
702.7
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
700.5
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
699.3
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
696.9
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
691.0
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
687.4
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
685.2
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
684.7
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
681.5
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
678.7
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
677.9
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
675.9
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
668.6
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
664.6
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
664.6
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
662.3
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
660.5
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
660.2
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
658.2
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
657.5
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
655.8
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
654.8
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
653.8
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
650.0
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
648.5
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
646.9
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
642.5
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
636.9
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
636.0
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
631.1
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
628.4
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
625.5
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
625.2
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
621.7
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
617.7
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
617.3
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
614.8
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
613.2
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
610.4
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
608.9
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
607.5
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
607.0
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
605.3
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
604.3
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
601.5
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
598.4
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
595.8
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
595.8
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
592.4
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
591.3
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
590.6
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
584.4
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
583.7
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
579.8
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
576.4
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
575.0
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
574.1
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
571.7
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
571.5
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
570.0
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
569.5
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
568.8
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
567.4
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
562.2
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
561.3
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
556.5
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
555.4
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
555.1
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
554.6
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
549.7
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
547.4
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
545.6
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
543.5
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
543.1
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
543.0
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
541.8
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
536.7
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
535.4
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
532.5
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
529.9
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
527.9
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
527.8
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
526.7
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
519.2
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
518.1
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
517.9
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
517.3
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
516.3
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
514.6
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
512.9
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
511.3
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
511.0
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
509.8
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
504.5
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
504.3
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
502.8
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
502.0
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
500.3
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
500.2
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
499.1
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
498.4
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
497.1
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
496.7
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
496.0
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
494.6
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
494.5
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
494.1
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
494.0
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
489.5
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
489.1
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
484.6
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
483.7
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
482.7
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
480.1
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
475.1
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
469.7
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
468.8
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
466.5
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
465.5
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
464.7
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
464.5
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
462.5
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
459.8
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
459.0
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
458.7
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
458.5
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
446.2
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
444.4
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
442.1
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
438.3
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
436.4
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
435.5
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
434.8
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
429.5
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
428.2
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
427.1
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
424.1
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
421.7
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
420.7
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
420.6
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
418.8
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
414.8
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
414.0
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
407.6
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
404.5
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
402.6
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
401.4
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
400.3
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
398.9
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
398.8
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
398.4
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
392.0
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
390.7
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
386.9
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
381.7
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
380.5
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
378.1
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
373.5
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
369.6
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
369.4
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
366.3
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
364.8
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
364.3
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
363.7
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
362.3
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
362.0
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
361.8
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
353.9
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
346.9
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
345.1
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
339.7
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
338.6
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
338.3
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
338.3
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
336.0
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
335.0
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
333.9
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
333.9
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
329.4
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
327.2
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
324.6
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
322.8
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
321.6
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
318.4
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
318.2
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
314.2
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
309.4
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
307.9
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
305.5
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
304.8
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
303.0
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
303.0
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
301.3
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
297.8
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
296.9
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
295.7
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
287.6
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
285.3
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
279.6
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
277.0
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
269.1
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
266.1
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
261.6
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
260.5
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
259.4
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
255.7
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
255.4
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
250.5
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
247.1
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
242.4
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
228.6
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
224.6
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
206.3
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
199.0
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
198.1
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
180.9
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
168.4
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
135.0
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
117.1
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CD81 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
532.7
Number of samples
81
Samples
Sample
Description
TPM
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
1100.3
DO46358
0 years, female, NA, stage:III, dead, 423 days
1061.4
DO46364
0 years, female, NA, stage:III, dead, 806 days
1001.4
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
948.2
DO46468
0 years, female, NA, stage:III, alive, 2776 days
913.7
DO46453
0 years, female, NA, stage:III, dead, 3294 days
907.8
DO46568
0 years, female, NA, stage:III, dead, 320 days
831.0
DO46366
0 years, female, NA, stage:III, dead, 2054 days
818.2
DO46350
0 years, female, NA, stage:III, dead, 886 days
807.5
DO46493
0 years, female, NA, stage:IV, alive, 839 days
785.8
DO46346
0 years, female, NA, stage:III, dead, 1187 days
782.6
DO46344
0 years, female, NA, stage:III, dead, 642 days
771.7
DO46380
0 years, female, NA, stage:III, dead, 1423 days
751.1
DO46448
0 years, female, NA, stage:III, dead, 654 days
737.1
DO46354
0 years, female, NA, stage:III, dead, 843 days
733.7
DO46390
0 years, female, NA, stage:III, dead, 374 days
714.5
DO46412
0 years, female, NA, stage:III, dead, 597 days
710.2
DO46576
0 years, female, NA, stage:III, alive, 133 days
702.8
DO46329
0 years, female, NA, stage:III, dead, 1699 days
691.2
DO46602
0 years, female, NA, stage:III, dead, 205 days
684.2
DO46386
0 years, female, NA, stage:III, dead, 1162 days
668.6
DO46581
0 years, female, NA, stage:III, dead, 408 days
659.3
DO46443
0 years, female, NA, stage:III, dead, 2464 days
644.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
639.7
DO46333
0 years, female, NA, stage:III, dead, 359 days
638.1
DO46368
0 years, female, NA, stage:III, dead, 2879 days
629.3
DO46326
0 years, female, NA, stage:III, dead, 701 days
623.5
DO46463
0 years, female, NA, stage:III, dead, 2451 days
614.5
DO46388
0 years, female, NA, stage:III, dead, 413 days
611.9
DO46342
0 years, female, NA, stage:III, dead, 1398 days
609.1
DO46396
0 years, female, NA, stage:III, dead, 583 days
601.9
DO46551
0 years, female, NA, stage:III, dead, 1055 days
595.4
DO46340
0 years, female, NA, stage:III, dead, 616 days
576.5
DO46591
0 years, female, NA, stage:III, dead, 195 days
558.2
DO46336
0 years, female, NA, stage:IV, dead, 664 days
557.9
DO46392
0 years, female, NA, stage:III, dead, 628 days
552.4
DO46376
0 years, female, NA, stage:III, dead, 1430 days
536.7
DO46372
0 years, female, NA, stage:III, dead, 1326 days
522.6
DO46398
0 years, female, NA, stage:III, alive, 437 days
516.7
DO46362
0 years, female, NA, stage:III, dead, 1639 days
503.6
DO46332
0 years, female, NA, stage:III, dead, 689 days
496.0
DO46338
0 years, female, NA, stage:III, dead, 596 days
494.9
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
479.2
DO46611
0 years, female, NA, stage:III, dead, 734 days
468.7
DO46352
0 years, female, NA, stage:III, dead, 677 days
461.6
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
449.6
DO46384
0 years, female, NA, stage:III, dead, 614 days
449.0
DO46334
0 years, female, NA, stage:III, dead, 496 days
441.8
DO46566
0 years, female, NA, stage:III, dead, 673 days
435.1
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
433.5
DO46400
0 years, female, NA, stage:III, dead, 719 days
424.2
DO46325
0 years, female, NA, stage:III, dead, 477 days
421.1
DO46528
0 years, female, NA, stage:III, alive, 6139 days
415.0
DO46356
0 years, female, NA, stage:III, dead, 911 days
411.0
DO46330
0 years, female, NA, stage:III, dead, 684 days
410.2
DO46533
0 years, female, NA, stage:III, alive, 3667 days
407.3
DO46370
0 years, female, NA, stage:III, dead, 1727 days
402.1
DO46378
0 years, female, NA, stage:III, alive, 843 days
400.6
DO46436
0 years, female, NA, stage:III, alive, 3193 days
379.9
DO46597
0 years, female, NA, stage:III, dead, 393 days
376.7
DO46327
0 years, female, NA, stage:III, dead, 184 days
375.4
DO46402
0 years, female, NA, stage:III, dead, 511 days
370.2
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
363.5
DO46561
0 years, female, NA, stage:III, dead, 195 days
349.4
DO46606
0 years, female, NA, stage:III, alive, 804 days
348.3
DO46404
0 years, female, NA, stage:III, dead, 690 days
343.7
DO46432
0 years, female, NA, stage:III, alive, 2218 days
338.5
DO46508
0 years, female, NA, stage:III, dead, 2101 days
337.9
DO46546
0 years, female, NA, stage:III, dead, 1889 days
326.3
DO46560
0 years, female, NA, stage:IV, dead, 286 days
322.3
DO46586
0 years, female, NA, stage:III, dead, 1019 days
298.9
DO46328
0 years, female, NA, stage:III, dead, 972 days
294.1
DO46382
0 years, female, NA, stage:IV, dead, 311 days
287.6
DO46348
0 years, female, NA, stage:IV, dead, 287 days
283.6
DO46571
0 years, female, NA, stage:III, dead, 243 days
266.5
DO46408
0 years, female, NA, stage:III, dead, 489 days
248.9
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
230.6
DO46588
0 years, female, NA, stage:III, dead, 438 days
230.6
DO46538
0 years, female, NA, stage:III, dead, 1527 days
228.1
DO46331
0 years, female, NA, stage:III, dead, 612 days
173.3
DO46518
0 years, female, NA, stage:III, alive, 2960 days
165.3
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.3
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.1
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.0
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.1
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.4
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.4
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.5
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.6
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.6
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.7
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.7
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.8
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.9
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.9
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-1.0
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-1.0
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-1.0
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-1.1
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-1.1
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-1.1
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-1.1
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-1.1
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-1.1
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-1.1
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-1.2
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-1.2
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-1.2
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-1.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-1.3
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-1.3
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-1.3
285fed94-1495-448e-879b-b55de9_D2
Tumor
-1.3
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-1.4
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-1.4
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-1.4
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-1.4
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-1.5
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-1.5
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-1.5
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-1.5
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-1.5
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-1.6
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-1.6
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-1.6
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-1.6
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-1.6
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-1.6
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-1.6
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-1.7
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-1.7
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-1.7
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-1.7
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-1.7
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-1.7
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-1.8
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-1.8
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-1.8
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-1.8
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-1.8
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-1.8
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-1.9
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-1.9
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-1.9
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-1.9
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-1.9
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-2.0
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-2.0
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-2.0
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-2.0
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-2.0
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-2.0
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-2.1
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-2.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-2.1
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-2.1
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-2.1
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-2.2
15524912-685a-47ce-a824-567848_D2
Tumor
-2.2
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-2.2
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-2.2
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-2.2
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-2.2
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-2.3
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-2.3
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-2.4
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-2.4
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-2.4
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-2.5
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-2.5
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-2.7
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-2.8
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-2.8
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-2.8
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-2.8
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-2.9
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-3.0
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-3.0
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-3.2
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-3.2
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-3.2
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-3.2
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-3.2
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-3.3
e9d416e7-f661-400a-896e-388545_D2
Tumor
-3.4
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-3.8
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-4.2
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-4.3
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-5.2
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.