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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST3GAL4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
123.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
484.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
448.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
412.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
405.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
382.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
361.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
358.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
341.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
296.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
293.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
281.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
231.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
209.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
204.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
165.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
153.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
151.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
146.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
144.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
135.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
128.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
119.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
117.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
112.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
105.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
98.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
85.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
83.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
77.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
73.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
72.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
69.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
67.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
64.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
64.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
62.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
62.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
61.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
61.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
59.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
56.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
54.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
52.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
52.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
51.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
50.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
48.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
47.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
35.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
33.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
29.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
24.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
22.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
19.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
19.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
15.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
11.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
8.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
4.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST3GAL4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
388.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
326.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
311.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
296.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
286.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
274.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
214.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
172.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
146.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
140.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
111.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
107.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
104.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
98.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
94.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
92.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
90.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
76.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
68.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
59.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
53.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
47.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
42.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
42.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
40.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
36.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
36.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
34.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
34.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
32.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
32.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
29.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
28.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
28.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
27.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
27.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
27.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
26.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
26.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
26.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
25.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
25.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
25.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
25.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
25.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
24.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
24.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
24.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
24.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
24.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
24.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
24.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
23.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
23.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
23.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
23.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
23.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
23.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
23.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
23.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
23.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
22.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
22.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
22.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
22.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
22.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
22.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
22.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
22.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
22.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
22.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
22.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
22.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
22.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
21.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
21.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
21.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
21.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
21.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
21.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
20.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
20.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
20.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
20.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
20.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
19.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
19.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
19.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
19.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
19.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
19.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
19.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
19.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
18.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
18.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
18.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
18.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
18.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
18.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
18.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
18.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
18.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
18.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
18.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
18.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
17.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
17.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
17.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
17.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
17.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
17.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
17.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
17.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
17.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
16.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
16.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
16.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
16.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
16.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
16.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
16.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
15.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
15.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
15.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
14.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
14.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
14.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
14.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
13.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
13.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
13.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
13.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
12.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
12.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
11.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
11.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
11.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
10.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
10.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
10.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
10.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
10.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
9.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
9.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
9.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
9.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
8.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
8.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
8.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
7.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
7.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
6.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
6.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
6.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
6.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
5.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
5.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
5.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
4.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
4.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
3.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST3GAL4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
76.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
38.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
33.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
22.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
21.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
20.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
19.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
18.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
17.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
17.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
15.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
14.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
14.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
13.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
13.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
13.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
13.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
12.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
12.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
12.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
11.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
10.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
10.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
10.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
10.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
9.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
9.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
9.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
9.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
9.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
9.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
8.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
8.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
8.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
8.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
7.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
7.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
7.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
6.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
6.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST3GAL4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
707.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
509.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
424.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
418.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
382.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
311.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
253.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
243.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
233.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
216.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
200.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
195.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
138.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
124.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
94.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
93.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
83.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
81.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
80.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
72.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
71.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
69.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
65.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
64.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
60.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
59.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
58.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
55.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
53.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
52.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
51.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
51.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
51.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
51.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
47.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
45.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
45.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
45.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
41.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
41.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
39.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
39.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
38.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
38.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
38.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
37.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
37.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
36.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
31.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
30.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
29.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
29.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
29.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
29.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
28.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
27.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
27.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
26.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
26.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
25.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
24.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
23.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
23.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
23.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
23.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
22.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
22.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
22.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
21.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
21.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
21.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
21.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
21.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
20.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
20.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
20.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
20.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
19.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
19.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
19.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
19.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
19.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
18.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
17.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
15.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
14.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
14.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
13.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
12.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
11.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
10.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
10.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
10.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
10.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
10.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
9.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
9.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
9.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
9.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
9.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
8.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
8.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
8.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
7.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
7.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
7.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
6.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
6.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
6.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
6.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
6.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
6.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
6.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
5.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
5.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
5.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
5.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
5.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
5.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
4.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
4.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
4.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
4.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
3.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
3.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
3.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
3.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
3.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
2.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
2.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
2.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
2.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
1.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
0.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0075560003
Tumor
0.9
CPT0023690003
Tumor
0.9
CPT0076330003
Tumor
0.8
CPT0064370003
Tumor
0.7
CPT0012640003
Normal
0.7
CPT0078660003
Tumor
0.6
CPT0014470001
Normal
0.6
CPT0001550001
Normal
0.5
CPT0079510001
Normal
0.5
CPT0084560003
Tumor
0.5
CPT0076350001
Normal
0.4
CPT0010170001
Normal
0.4
CPT0088500001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0007870001
Normal
0.4
CPT0007860003
Tumor
0.3
CPT0025920001
Normal
0.3
CPT0077490003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0079300001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0019160001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0079000001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0006630003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0001340003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0065450001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0086820003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0012670003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0000890001
Normal
-0.3
CPT0069160003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0012280003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0007320003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0088920001
Normal
-0.4
CPT0088550004
Tumor
-0.4
CPT0088900003
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0086950003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0065430003
Tumor
-0.5
CPT0078510003
Tumor
-0.6
CPT0012180003
Tumor
-0.8
CPT0017850003
Tumor
-0.9
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0002270011
Tumor
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0086360003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0020020001
Normal
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0066470004
Tumor
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0089480003
Normal
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0006530001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0089460004
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
