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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ELP4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
30.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
29.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
25.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
24.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
23.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
12.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
11.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
9.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
8.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
8.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
6.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
6.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
6.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
5.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
5.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
4.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
2.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ELP4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
29.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
28.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
27.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
21.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
21.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
18.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
18.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
17.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
16.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
16.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
16.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
16.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
15.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
15.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
14.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
14.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
14.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
14.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
13.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
13.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
13.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
13.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
13.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
13.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
13.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
13.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
12.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
12.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
12.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
12.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
12.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
12.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
12.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
12.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
12.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
12.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
12.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
11.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
11.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
11.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
11.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
11.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
11.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
11.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
11.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
11.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
11.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
11.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
11.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
11.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
11.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
11.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
10.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
10.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
10.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
10.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
10.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
10.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
10.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
10.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
10.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
10.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
10.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
10.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
10.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
10.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
10.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
10.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
10.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
10.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
10.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
9.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
9.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
9.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
9.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
9.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
9.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
9.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
9.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
9.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
9.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
9.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
9.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
8.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
8.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
8.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
8.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
8.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
8.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
8.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
8.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
8.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
8.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
8.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
8.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
8.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
8.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
8.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
8.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
8.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
8.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
8.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
7.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
7.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
7.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
7.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
7.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
7.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
7.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
7.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
7.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
7.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
7.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
7.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
7.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
7.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
7.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
7.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
6.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
6.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
6.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
6.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
6.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
6.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
6.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
6.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
6.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
5.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
5.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
5.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
5.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
5.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
5.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
4.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
4.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
4.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
3.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
3.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
2.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ELP4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
19.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
17.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
17.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
17.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
16.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
15.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
14.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
14.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
13.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
13.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
13.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
13.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
12.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
12.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
12.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
11.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
11.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
11.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
11.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
10.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
10.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
10.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
10.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
9.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
8.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
8.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
8.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
8.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
7.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
7.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
6.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
6.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
6.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
5.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
5.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
5.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
5.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
4.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ELP4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
54.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
50.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
43.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
39.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
36.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
30.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
28.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
28.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
28.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
27.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
26.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
24.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
24.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
19.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
19.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
18.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
18.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
18.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
18.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
17.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
16.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
16.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
16.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
16.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
14.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
14.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
13.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
13.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
13.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
13.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
12.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
12.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
12.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
12.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
12.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
12.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
12.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
12.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
12.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
12.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
12.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
11.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
11.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
11.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
11.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
11.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
10.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
10.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
10.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
10.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
10.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
10.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
10.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
10.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
10.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
10.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
10.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
9.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
9.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
9.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
9.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
9.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
9.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
8.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
8.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
8.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
8.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
8.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
8.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
8.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
8.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
8.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
8.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
8.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
8.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
8.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
8.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
8.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
7.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
7.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
7.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
7.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
7.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
7.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
7.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
6.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
6.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
6.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
6.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
6.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
6.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
6.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
6.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
5.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
5.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
5.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
5.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
5.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
4.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
4.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
4.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
4.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
4.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
4.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
3.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
3.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
1.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
1.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
0.6
CPT0078660003
Tumor
0.5
CPT0006730001
Normal
0.4
CPT0069000003
Tumor
0.4
CPT0012570003
Normal
0.4
CPT0001340003
Tumor
0.4
CPT0006950001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0086370003
Normal
0.3
CPT0012770003
Normal
0.3
CPT0023710001
Normal
0.3
CPT0018250001
Normal
0.3
CPT0015730003
Tumor
0.3
CPT0079000001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0002350011
Tumor
0.3
CPT0023360001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0066430001
Normal
0.3
CPT0088500001
Normal
0.3
CPT0088780001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0007870001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0000890001
Normal
0.2
CPT0012090003
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0010170001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0001350001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0079230003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0079430001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0077500001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0001550001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0001510001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0088570001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0009020003
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0088550004
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0077310003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0012180003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0065690003
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0025290003
Tumor
-0.4
CPT0063630003
Tumor
-0.5
CPT0084560003
Tumor
-0.6
CPT0085670003
Tumor
-0.6
CPT0081880003
Tumor
-0.7
CPT0076330003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.