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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ELP4 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
23.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
20.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
20.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
16.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
16.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
16.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
15.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
15.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
15.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
14.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
13.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
13.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
13.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
12.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
12.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
11.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
11.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
11.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
11.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
11.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
11.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
11.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
11.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
11.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
11.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
10.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
10.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
10.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
10.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
10.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
10.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
10.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
10.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
9.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
9.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
9.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
9.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
9.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
9.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
9.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
9.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
9.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
9.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
9.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
9.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
9.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
8.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
8.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
8.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
8.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
8.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
8.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
8.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
8.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
8.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
8.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
8.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
8.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
8.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
8.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
8.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
7.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
7.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
7.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
7.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
7.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
7.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
7.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
7.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
7.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
7.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
7.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
6.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
6.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
6.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
6.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
6.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
6.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
6.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
6.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
6.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
6.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
6.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
6.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
6.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
6.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
6.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
6.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
6.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
6.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
6.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
6.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
6.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
6.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
6.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
6.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
6.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
5.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
5.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
5.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
5.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
5.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
5.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
5.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
5.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
5.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
5.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
5.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
5.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
5.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
5.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
5.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
5.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
5.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
5.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
5.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
5.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
5.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
5.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
5.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
5.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
5.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
5.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
4.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
4.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
4.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
4.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
4.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
4.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
4.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
4.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
4.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
4.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
4.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
4.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
4.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
4.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
4.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
4.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
4.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
4.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
4.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
3.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
3.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
3.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
3.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
3.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
3.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
3.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
3.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
3.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
3.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
3.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
3.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
3.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
3.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
3.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
3.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
3.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
2.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
2.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ELP4 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.2
Number of samples
231
Samples
Sample
Description
TPM
DO48751
0 years, male, NA, stage:2, dead, 480 days
13.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
11.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
10.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
10.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
10.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
9.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
9.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
9.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
9.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
8.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
8.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
8.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
8.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
7.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
7.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
7.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
7.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
7.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
7.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
7.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
7.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
6.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
6.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
6.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
6.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
6.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
6.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
6.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
6.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
6.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
6.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
6.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
6.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
6.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
6.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
6.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
6.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
6.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
6.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
6.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
5.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
5.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
5.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
5.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
5.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
5.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
5.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
5.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
5.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
5.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
5.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
5.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
5.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
5.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
5.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
5.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
5.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
5.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
5.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
5.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
5.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
5.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
5.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
4.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
4.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
4.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
4.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
4.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
4.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
4.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
4.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
4.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
4.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
4.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
4.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
4.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
4.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
4.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
4.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
4.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
4.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
4.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
4.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
4.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
4.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
4.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
4.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
4.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
4.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
4.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
4.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
4.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
3.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
3.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
3.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
3.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
3.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
3.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
3.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
3.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
3.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
3.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
3.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
3.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
3.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
3.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
3.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
3.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
3.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
3.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
3.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
3.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
3.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
3.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
3.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
3.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
3.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
3.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
2.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
2.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
2.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
2.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
2.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
2.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
2.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
2.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
2.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
2.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
2.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
2.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
2.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
2.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
1.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
715
Tumor
0.9
1013
Tumor
0.9
131
Tumor
0.8
965
Tumor
0.8
695
Tumor
0.7
1043
Tumor
0.6
745
Tumor
0.6
723
Tumor
0.6
283
Tumor
0.6
473
Tumor
0.6
227
Tumor
0.5
742
Normal
0.5
728
Normal
0.5
413
Tumor
0.5
554
Normal
0.5
738
Normal
0.4
824
Normal
0.4
816
Normal
0.4
916
Normal
0.4
463
Tumor
0.4
915
Tumor
0.4
983
Tumor
0.4
696
Normal
0.4
938
Normal
0.4
617
Tumor
0.4
528
Normal
0.4
714
Normal
0.4
918
Normal
0.4
537
Tumor
0.4
716
Normal
0.3
744
Normal
0.3
536
Normal
0.3
663
Tumor
0.3
392
Normal
0.3
868
Normal
0.3
741
Tumor
0.3
713
Tumor
0.3
851
Tumor
0.3
533
Tumor
0.3
1042
Normal
0.3
698
Normal
0.3
484
Normal
0.3
722
Normal
0.3
396
Normal
0.3
815
Tumor
0.3
862
Normal
0.3
513
Tumor
0.3
147
Tumor
0.3
394
Normal
0.3
517
Tumor
0.3
1031
Tumor
0.3
553
Tumor
0.3
474
Normal
0.3
914
Normal
0.3
366
Normal
0.3
1032
Normal
0.3
386
Normal
0.3
924
Normal
0.3
363
Tumor
0.3
466
Normal
0.3
922
Normal
0.3
286
Normal
0.3
778
Normal
0.3
665
Tumor
0.3
978
Normal
0.3
864
Normal
0.3
514
Normal
0.3
448
Normal
0.2
298
Normal
0.2
538
Normal
0.2
487
Tumor
0.2
1026
Normal
0.2
913
Tumor
0.2
951
Tumor
0.2
981
Tumor
0.2
865
Tumor
0.2
911
Tumor
0.2
921
Tumor
0.2
818
Normal
0.2
232
Normal
0.2
465
Tumor
0.2
571
Tumor
0.2
284
Normal
0.2
341
Tumor
0.2
1014
Normal
0.2
546
Normal
0.2
388
Normal
0.2
228
Normal
0.2
342
Normal
0.2
451
Tumor
0.2
461
Tumor
0.2
518
Normal
0.2
952
Normal
0.2
1022
Normal
0.2
926
Normal
0.2
376
Normal
0.2
467
Tumor
0.2
435
Tumor
0.2
686
Normal
0.2
452
Normal
0.2
358
Normal
0.2
1046
Normal
0.2
468
Normal
0.2
212
Normal
0.2
481
Tumor
0.2
362
Normal
0.2
956
Normal
0.2
526
Normal
0.2
482
Normal
0.2
364
Normal
0.2
534
Normal
0.2
746
Normal
0.2
721
Tumor
0.2
1044
Normal
0.2
737
Tumor
0.2
982
Normal
0.2
272
Normal
0.2
472
Normal
0.2
456
Normal
0.2
858
Normal
0.2
262
Normal
0.2
393
Tumor
0.2
635
Tumor
0.2
955
Tumor
0.2
878
Normal
0.2
356
Normal
0.2
1021
Tumor
0.2
912
Normal
0.2
884
Normal
0.2
422
Normal
0.2
558
Normal
0.2
966
Normal
0.2
852
Normal
0.1
477
Tumor
0.1
648
Normal
0.1
462
Normal
0.1
285
Tumor
0.1
222
Normal
0.1
424
Normal
0.1
984
Normal
0.1
968
Normal
0.1
352
Normal
0.1
572
Normal
0.1
124
Normal
0.1
488
Normal
0.1
937
Tumor
0.1
128
Normal
0.1
447
Tumor
0.1
268
Normal
0.1
411
Tumor
0.1
1016
Normal
0.1
1041
Tumor
0.1
866
Normal
0.1
127
Tumor
0.1
976
Normal
0.1
497
Tumor
0.1
436
Normal
0.1
568
Normal
0.1
428
Normal
0.1
494
Normal
0.1
957
Tumor
0.1
446
Normal
0.1
357
Tumor
0.1
697
Tumor
0.1
186
Normal
0.1
464
Normal
0.1
975
Tumor
0.1
1045
Tumor
0.1
195
Tumor
0.1
432
Normal
0.1
727
Tumor
0.1
944
Normal
0.1
416
Normal
0.1
943
Tumor
0.1
647
Tumor
0.1
312
Normal
0.1
391
Tumor
0.1
874
Normal
0.1
328
Normal
0.1
271
Tumor
0.1
1028
Normal
0.1
882
Normal
0.1
786
Normal
0.1
314
Normal
0.1
148
Normal
0.1
523
Tumor
0.1
498
Normal
0.1
414
Normal
0.0
954
Normal
0.0
492
Normal
0.0
756
Normal
0.0
977
Tumor
0.0
545
Tumor
0.0
964
Normal
0.0
958
Normal
0.0
478
Normal
0.0
574
Normal
0.0
666
Normal
0.0
196
Normal
0.0
368
Normal
0.0
412
Normal
0.0
383
Tumor
0.0
123
Tumor
0.0
664
Normal
0.0
257
Tumor
0.0
385
Tumor
0.0
278
Normal
0.0
126
Normal
0.0
277
Tumor
0.0
636
Normal
0.0
161
Tumor
0.0
313
Tumor
0.0
471
Tumor
0.0
873
Tumor
0.0
444
Normal
0.0
415
Tumor
0.0
138
Normal
0.0
524
Normal
0.0
353
Tumor
0.0
564
Normal
0.0
188
Normal
0.0
172
Normal
0.0
332
Normal
0.0
917
Tumor
0.0
434
Normal
0.0
221
Tumor
0.0
211
Tumor
0.0
672
Normal
0.0
857
Tumor
0.0
618
Normal
0.0
192
Normal
0.0
142
Normal
0.0
224
Normal
0.0
231
Tumor
0.0
516
Normal
-0.1
642
Normal
-0.1
162
Normal
-0.1
755
Tumor
-0.1
223
Tumor
-0.1
267
Tumor
-0.1
628
Normal
-0.1
1015
Tumor
-0.1
685
Tumor
-0.1
354
Normal
-0.1
344
Normal
-0.1
662
Normal
-0.1
515
Tumor
-0.1
967
Tumor
-0.1
867
Tumor
-0.1
1027
Tumor
-0.1
185
Tumor
-0.1
384
Normal
-0.1
146
Normal
-0.1
261
Tumor
-0.1
258
Normal
-0.1
953
Tumor
-0.1
327
Tumor
-0.1
331
Tumor
-0.1
365
Tumor
-0.1
861
Tumor
-0.1
113
Tumor
-0.1
426
Normal
-0.1
963
Tumor
-0.1
641
Tumor
-0.1
111
Normal
-0.1
923
Tumor
-0.1
431
Tumor
-0.1
627
Tumor
-0.1
877
Tumor
-0.1
863
Tumor
-0.1
218
Normal
-0.2
311
Tumor
-0.2
557
Tumor
-0.2
483
Tumor
-0.2
535
Tumor
-0.2
427
Tumor
-0.2
661
Tumor
-0.2
817
Tumor
-0.2
214
Normal
-0.2
423
Tumor
-0.2
145
Tumor
-0.2
297
Tumor
-0.2
724
Normal
-0.2
114
Normal
-0.2
616
Normal
-0.2
785
Tumor
-0.2
187
Tumor
-0.2
387
Tumor
-0.2
355
Tumor
-0.2
777
Tumor
-0.2
567
Tumor
-0.2
814
Normal
-0.2
171
Tumor
-0.2
191
Tumor
-0.2
823
Tumor
-0.2
615
Tumor
-0.2
351
Tumor
-0.2
491
Tumor
-0.2
525
Tumor
-0.3
1025
Tumor
-0.3
132
Normal
-0.3
136
Normal
-0.3
671
Tumor
-0.3
881
Tumor
-0.3
527
Tumor
-0.3
125
Tumor
-0.3
375
Tumor
-0.3
421
Tumor
-0.3
455
Tumor
-0.3
217
Tumor
-0.3
433
Tumor
-0.3
925
Tumor
-0.3
112
Tumor
-0.3
573
Tumor
-0.3
743
Tumor
-0.4
883
Tumor
-0.4
213
Tumor
-0.4
445
Tumor
-0.4
425
Tumor
-0.4
443
Tumor
-0.4
395
Tumor
-0.4
563
Tumor
-0.4
137
Tumor
-0.4
361
Tumor
-0.4
813
Tumor
-0.4
367
Tumor
-0.4
141
Tumor
-0.5
343
Tumor
-0.5
493
Tumor
-0.6
135
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
