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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
49.7
nTPM
HPA Brain:
170.2
nTPM
GTEx:
49.7
nTPM
FANTOM5:
204.7
Scaled Tags Per Million
Pig:
95.6
nTPM
Mouse:
125.2
nTPM
Allen mouse:
9.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
170.2
Sample id
Sample description
nTPM
Amygdala nTPM: 170.2
2814
Male, age 76, right hemisphere
210.0
2517
Female, age 94, left hemisphere
174.3
2514
Male, age 75, right hemisphere
169.8
1987
Female, age 91, left hemisphere
149.3
2695
Female, age 67, right hemisphere
147.7
Basal amygdala nTPM: 156.8
2609
Male, age 75, right hemisphere
190.5
2685
Female, age 94, left hemisphere
175.6
1955
Male, age 76, both hemispheres
167.4
2243
Female, age 91, right hemisphere
159.2
2110
Male, age 80, left hemisphere
141.4
2827
Female, age 67, right hemisphere
106.6
Central amygdala nTPM: 150.5
1905
Male, age 76, both hemispheres
190.5
2515
Male, age 75, right hemisphere
155.2
2239
Male, age 80, left hemisphere
150.7
2701
Female, age 91, right hemisphere
150.2
2826
Female, age 94, left hemisphere
106.0
Corticomedial amygdala nTPM: 161.4
2428
Male, age 75, right hemisphere
189.0
2240
Male, age 76, both hemispheres
165.9
2429
Female, age 94, left hemisphere
164.7
2242
Female, age 91, right hemisphere
159.4
2829
Male, age 80, left hemisphere
154.1
2535
Female, age 67, right hemisphere
135.3
Lateral amygdala nTPM: 144.8
1883
Male, age 76, both hemispheres
185.6
2516
Male, age 75, right hemisphere
170.7
2255
Female, age 91, right hemisphere
143.3
2256
Male, age 80, left hemisphere
135.6
2534
Female, age 94, left hemisphere
129.1
2830
Female, age 67, right hemisphere
104.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 49.7
Samples: 152
Max nTPM: 118.0
Min nTPM: 5.2
Std nTPM: 16.6
Median nTPM: 47.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
118.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
101.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
88.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
87.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
85.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
81.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
80.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
80.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
79.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
78.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
74.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
73.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
73.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
71.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
70.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
70.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
69.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
68.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
66.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
66.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
65.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
65.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
63.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
63.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
62.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
62.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
62.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
62.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
62.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
61.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
61.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
61.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
60.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
60.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
60.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
59.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
59.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
59.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
59.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
59.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
59.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
59.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
59.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
58.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
57.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
57.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
57.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
57.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
56.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
56.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
56.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
56.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
56.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
55.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
55.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
54.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
53.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
53.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
53.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
53.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
53.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
52.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
52.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
52.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
52.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
51.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
51.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
51.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
50.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
50.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
50.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
50.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
48.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
48.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
48.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
47.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
47.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
47.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
47.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
47.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
46.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
46.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
46.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
46.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
46.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
46.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
46.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
45.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
44.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
44.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
44.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
44.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
44.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
43.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
43.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
43.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
42.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
42.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
42.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
42.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
42.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
41.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
41.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
40.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
40.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
40.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
40.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
40.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
39.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
39.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
38.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
38.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
37.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
37.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
36.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
36.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
36.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
36.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
35.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
35.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
34.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
34.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
34.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
34.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
34.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
34.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
34.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
34.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
33.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
33.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
33.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
33.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
33.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
33.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
32.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
32.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
32.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
31.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
31.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
31.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
30.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
27.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
27.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
26.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
25.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
24.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
24.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
22.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
21.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
19.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
19.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
5.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
125.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 125.2
Samples: 4
Max nTPM: 134.2
Min nTPM: 118.0
Sample A
Male
134.2
Sample B
Male
126.8
Sample C
Female
121.9
Sample D
Female
118.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
