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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VAT1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
265.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
190.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
164.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
132.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
121.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
120.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
118.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
95.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
91.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
89.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
88.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
81.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
79.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
79.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
76.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
76.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
74.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
68.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
68.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
67.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
63.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
63.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
63.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
63.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
62.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
61.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
61.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
60.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
57.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
53.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
52.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
51.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
51.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
50.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
48.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
47.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
46.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
44.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
43.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
43.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
43.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
42.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
42.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
39.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
37.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
36.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
36.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
36.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
35.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
35.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
34.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
33.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
30.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
29.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
29.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
28.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
19.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
15.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VAT1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
149.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
808.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
468.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
338.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
319.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
314.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
310.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
301.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
301.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
292.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
277.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
276.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
271.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
267.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
266.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
263.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
262.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
262.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
257.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
257.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
257.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
248.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
247.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
247.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
244.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
243.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
242.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
241.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
240.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
239.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
238.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
238.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
237.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
237.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
236.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
236.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
235.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
235.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
234.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
233.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
233.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
230.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
229.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
229.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
229.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
229.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
228.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
226.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
224.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
224.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
223.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
223.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
222.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
222.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
220.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
220.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
219.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
219.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
219.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
218.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
217.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
215.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
214.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
213.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
212.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
209.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
208.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
207.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
207.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
206.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
206.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
206.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
205.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
205.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
205.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
205.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
204.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
204.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
203.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
203.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
203.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
202.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
202.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
201.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
201.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
201.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
199.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
199.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
199.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
199.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
198.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
197.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
196.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
196.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
196.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
195.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
195.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
195.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
195.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
194.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
194.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
193.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
192.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
192.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
192.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
192.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
191.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
191.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
190.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
190.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
190.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
189.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
189.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
189.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
189.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
189.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
188.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
188.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
187.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
186.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
186.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
186.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
186.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
184.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
184.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
183.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
183.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
183.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
183.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
183.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
183.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
183.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
183.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
182.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
182.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
182.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
182.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
182.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
182.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
181.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
181.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
181.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
180.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
180.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
180.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
180.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
179.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
179.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
179.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
179.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
178.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
178.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
178.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
177.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
177.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
177.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
176.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
175.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
175.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
175.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
175.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
174.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
173.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
173.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
173.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
173.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
172.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
172.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
172.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
172.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
172.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
172.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
171.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
170.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
170.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
170.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
169.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
169.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
169.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
168.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
168.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
168.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
168.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
168.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
168.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
168.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
168.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
168.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
167.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
167.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
166.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
166.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
165.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
165.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
165.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
165.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
165.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
164.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
163.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
163.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
163.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
163.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
163.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
162.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
162.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
162.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
161.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
161.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
161.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
160.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
160.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
160.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
160.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
160.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
159.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
159.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
159.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
159.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
158.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
158.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
158.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
158.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
158.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
158.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
157.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
157.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
157.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
156.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
156.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
156.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
155.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
155.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
154.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
154.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
154.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
153.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
153.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
153.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
153.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
153.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
152.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
152.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
152.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
152.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
152.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
151.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
151.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
151.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
151.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
150.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
150.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
149.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
149.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
148.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
148.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
148.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
148.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
147.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
147.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
147.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
146.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
146.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
146.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
146.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
145.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
145.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
144.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
144.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
144.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
144.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
144.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
144.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
143.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
143.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
143.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
143.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
143.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
142.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
142.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
142.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
140.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
140.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
140.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
140.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
140.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
140.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
139.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
139.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
139.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
138.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
138.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
138.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
138.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
138.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
137.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
137.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
136.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
136.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
136.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
136.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
135.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
135.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
135.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
135.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
134.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
133.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
133.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
133.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
133.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
133.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
133.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
133.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
133.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
133.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
133.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
133.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
132.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
132.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
132.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
131.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
131.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
131.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
131.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
131.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
130.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
129.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
129.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
129.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
129.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
129.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
128.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
128.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
128.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
128.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
128.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
128.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
128.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
127.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
127.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
126.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
126.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
125.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
124.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
124.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
124.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
123.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
123.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
122.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
122.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
122.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
122.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
121.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
121.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
120.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
120.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
119.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
119.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
119.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
119.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
118.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
118.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
118.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
118.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
117.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
117.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
117.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
117.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
117.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
117.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
116.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
116.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
116.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
116.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
115.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
115.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
114.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
114.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
114.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
114.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
114.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
114.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
114.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
114.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
113.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
112.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
112.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
112.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
112.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
111.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
111.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
111.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
110.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
110.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
109.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
109.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
109.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
108.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
108.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
108.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
108.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
108.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
107.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
107.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
106.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
105.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
105.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
105.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
105.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
105.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
104.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
104.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
104.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
104.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
103.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
103.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
103.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
102.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
102.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
102.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
101.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
101.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
101.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
100.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
100.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
100.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
99.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
98.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
98.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
98.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
98.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
97.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
97.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
97.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
97.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
97.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
97.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
95.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
94.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
94.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
94.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
93.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
93.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
93.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
93.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
92.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
92.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
91.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
91.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
91.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
89.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
89.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
88.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
87.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
87.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
86.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
86.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
85.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
85.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
83.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
83.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
82.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
82.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
82.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
81.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
79.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
79.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
78.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
74.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
72.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
71.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
71.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
70.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
70.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
69.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
69.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
68.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
67.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
66.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
64.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
64.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
64.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
63.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
63.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
62.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
61.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
59.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
59.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
59.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
59.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
58.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
58.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
57.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
57.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
56.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
56.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
56.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
55.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
54.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
51.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
51.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
50.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
48.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
46.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
46.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
45.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
45.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
43.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
42.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
41.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
41.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
40.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
39.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
37.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
35.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
30.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
28.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
25.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
24.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
22.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
16.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
15.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VAT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
134.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
284.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
262.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
259.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
226.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
217.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
211.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
204.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
201.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
197.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
189.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
184.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
180.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
179.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
174.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
174.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
172.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
171.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
169.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
167.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
167.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
166.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
161.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
161.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
161.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
160.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
159.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
158.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
157.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
156.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
155.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
155.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
153.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
153.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
151.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
150.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
149.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
148.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
148.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
148.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
147.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
141.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
140.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
139.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
138.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
136.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
135.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
135.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
135.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
134.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
131.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
128.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
128.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
127.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
127.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
126.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
125.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
124.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
124.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
120.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
120.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
120.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
119.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
118.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
115.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
115.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
114.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
112.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
111.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
111.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
108.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
108.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
108.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
108.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
105.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
104.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
103.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
100.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
97.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
97.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
96.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
95.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
94.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
93.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
92.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
91.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
89.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
88.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
86.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
82.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
79.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
79.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
78.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
78.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
76.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
72.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
64.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
62.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
61.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VAT1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
227.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
770.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
766.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
718.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
640.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
640.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
592.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
544.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
530.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
504.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
497.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
483.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
463.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
458.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
451.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
446.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
407.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
403.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
402.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
397.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
396.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
393.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
387.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
386.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
378.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
369.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
369.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
366.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
362.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
357.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
356.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
354.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
353.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
351.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
350.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
348.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
346.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
342.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
330.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
325.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
324.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
324.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
321.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
321.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
320.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
319.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
317.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
316.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
311.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
311.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
310.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
309.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
307.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
304.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
304.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
303.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
299.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
298.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
297.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
295.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
295.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
293.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
291.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
291.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
290.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
289.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
287.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
287.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
282.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
277.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
277.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
277.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
273.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
272.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
272.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
269.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
267.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
266.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
265.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
264.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
261.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
258.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
257.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
255.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
254.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
253.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
253.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
251.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
249.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
247.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
246.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
245.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
245.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
243.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
243.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
243.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
242.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
242.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
241.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
241.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
240.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
239.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
238.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
238.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
238.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
238.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
234.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
233.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
233.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
232.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
231.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
231.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
228.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
227.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
227.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
226.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
226.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
225.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
225.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
224.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
224.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
224.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
223.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
222.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
222.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
218.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
217.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
216.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
215.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
214.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
214.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
211.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
211.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
211.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
211.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
211.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
209.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
207.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
207.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
206.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
206.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
205.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
205.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
205.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
205.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
204.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
204.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
202.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
201.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
201.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
199.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
199.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
198.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
197.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
197.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
197.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
197.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
196.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
195.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
195.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
195.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
195.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
194.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
194.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
193.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
193.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
192.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
191.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
191.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
191.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
189.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
188.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
187.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
186.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
186.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
185.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
184.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
183.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
183.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
183.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
182.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
182.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
181.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
181.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
179.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
178.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
177.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
177.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
177.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
176.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
176.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
176.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
175.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
174.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
173.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
172.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
170.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
169.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
168.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
167.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
164.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
163.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
163.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
162.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
160.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
160.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
159.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
159.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
157.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
156.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
156.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
154.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
154.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
153.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
153.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
152.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
152.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
152.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
151.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
150.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
149.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
147.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
145.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
144.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
143.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
143.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
141.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
140.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
140.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
139.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
138.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
138.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
137.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
136.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
135.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
135.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
132.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
132.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
132.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
131.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
128.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
125.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
124.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
122.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
121.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
120.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
119.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
117.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
116.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
112.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
111.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
110.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
109.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
108.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
107.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
106.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
106.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
106.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
105.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
101.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
101.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
99.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
98.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
96.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
96.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
87.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
82.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
81.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
81.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
80.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
80.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
72.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
67.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
65.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
65.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
64.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
61.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
59.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
56.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
42.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
39.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
35.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
27.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
1.3
CPT0086950003
Tumor
1.1
CPT0079180003
Tumor
1.0
CPT0088550004
Tumor
0.9
CPT0078800003
Tumor
0.8
CPT0001340003
Tumor
0.7
CPT0024670003
Tumor
0.7
CPT0012900004
Tumor
0.6
CPT0014450004
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0088970003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0001190001
Normal
0.4
CPT0025110003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0026420001
Normal
0.4
CPT0065750003
Tumor
0.4
CPT0064370003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0014160003
Tumor
0.3
CPT0077310003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0081990003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0012570003
Normal
0.2
CPT0012090003
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0012080003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0079430001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0084590001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0014350001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0001270001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0020020001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0025230003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0020130001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0069160003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0012180003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0019160001
Normal
-0.4
CPT0001260009
Tumor
-0.4
CPT0063330001
Normal
-0.4
CPT0079510001
Normal
-0.4
CPT0081600003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0069000003
Tumor
-0.4
CPT0088640003
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0092190003
Normal
-0.4
CPT0079380003
Tumor
-0.4
CPT0079300001
Normal
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
