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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COL1A1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
94.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
3657.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
299.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
195.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
149.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
141.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
128.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
116.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
96.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
94.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
72.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
64.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
56.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
56.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
49.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
48.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
46.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
45.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
41.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
41.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
38.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
38.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
38.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
34.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
28.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
26.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
25.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
25.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
25.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
24.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
22.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
19.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
18.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
18.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
17.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
14.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
11.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
11.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
7.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
6.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
5.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
2.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COL1A1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
226.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11212.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5859.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
2135.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
2018.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
1762.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1490.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1272.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
1254.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
1230.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
1193.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
1151.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
1022.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
929.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
927.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
915.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
856.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
838.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
829.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
815.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
805.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
797.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
795.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
791.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
767.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
759.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
746.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
730.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
725.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
719.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
691.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
669.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
661.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
655.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
653.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
600.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
596.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
560.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
548.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
540.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
540.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
538.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
536.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
534.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
530.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
528.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
523.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
522.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
513.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
511.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
490.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
484.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
475.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
471.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
468.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
453.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
448.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
447.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
443.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
437.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
435.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
434.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
428.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
427.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
427.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
426.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
420.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
420.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
420.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
418.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
411.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
408.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
406.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
395.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
395.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
392.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
382.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
378.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
376.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
375.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
364.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
355.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
353.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
351.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
351.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
350.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
349.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
348.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
341.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
337.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
335.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
335.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
333.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
331.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
330.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
329.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
328.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
318.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
317.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
312.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
311.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
309.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
308.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
291.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
290.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
287.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
287.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
287.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
284.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
282.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
281.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
279.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
274.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
274.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
272.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
272.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
270.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
269.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
267.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
263.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
261.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
260.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
260.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
260.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
258.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
257.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
253.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
253.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
244.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
242.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
241.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
239.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
233.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
232.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
227.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
227.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
224.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
223.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
220.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
219.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
219.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
218.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
218.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
217.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
215.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
213.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
213.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
206.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
203.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
203.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
201.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
200.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
200.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
200.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
200.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
199.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
199.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
197.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
196.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
195.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
192.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
191.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
190.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
190.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
190.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
189.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
189.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
187.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
186.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
186.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
186.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
185.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
184.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
184.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
184.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
183.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
183.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
179.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
175.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
173.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
173.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
172.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
172.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
172.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
170.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
167.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
165.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
165.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
165.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
164.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
163.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
160.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
159.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
157.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
156.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
155.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
155.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
153.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
152.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
152.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
150.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
149.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
149.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
148.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
148.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
148.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
145.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
145.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
145.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
144.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
144.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
143.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
142.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
142.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
140.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
139.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
138.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
137.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
137.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
137.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
135.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
135.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
134.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
134.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
133.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
132.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
132.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
126.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
124.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
123.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
123.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
122.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
121.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
120.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
120.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
119.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
118.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
117.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
117.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
116.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
116.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
116.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
115.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
115.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
115.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
115.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
115.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
114.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
114.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
113.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
112.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
111.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
110.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
110.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
109.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
109.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
108.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
106.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
106.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
105.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
104.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
104.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
104.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
103.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
103.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
102.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
101.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
101.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
101.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
100.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
99.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
99.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
98.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
98.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
98.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
97.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
96.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
95.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
94.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
94.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
94.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
94.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
93.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
93.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
91.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
91.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
90.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
90.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
89.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
89.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
89.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
88.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
86.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
84.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
84.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
83.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
82.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
82.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
82.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
81.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
81.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
80.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
80.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
79.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
79.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
78.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
78.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
78.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
77.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
76.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
76.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
76.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
75.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
75.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
75.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
74.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
74.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
74.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
73.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
73.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
70.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
70.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
69.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
69.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
69.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
69.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
69.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
67.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
67.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
67.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
66.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
66.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
65.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
65.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
64.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
61.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
61.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
61.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
60.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
60.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
60.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
59.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
59.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
59.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
58.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
57.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
57.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
57.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
57.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
56.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
56.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
55.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
54.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
54.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
54.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
54.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
54.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
53.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
53.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
53.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
52.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
52.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
52.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
52.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
51.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
50.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
50.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
49.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
49.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
49.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
49.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
49.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
49.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
48.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
48.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
48.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
48.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
48.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
47.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
47.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
45.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
45.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
44.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
44.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
43.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
43.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
43.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
43.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
43.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
43.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
43.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
42.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
42.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
42.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
42.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
42.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
41.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
41.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
41.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
41.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
41.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
41.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
40.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
40.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
40.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
40.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
40.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
39.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
39.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
39.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
38.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
38.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
38.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
37.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
36.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
35.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
35.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
35.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
35.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
34.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
33.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
33.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
32.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
32.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
32.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
31.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
31.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
30.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
29.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
29.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
29.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
29.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
28.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
28.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
28.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
28.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
27.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
27.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
26.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
25.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
25.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
25.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
25.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
25.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
24.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
24.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
23.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
23.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
23.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
22.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
22.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
21.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
21.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
21.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
20.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
19.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
19.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
17.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
17.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
17.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
16.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
16.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
10.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
8.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
6.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
5.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
2.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COL1A1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
149.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
3723.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
1343.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1069.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
704.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
501.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
461.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
449.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
317.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
275.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
252.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
232.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
228.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
218.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
216.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
202.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
200.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
200.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
199.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
193.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
190.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
174.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
174.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
143.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
143.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
120.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
114.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
113.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
107.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
104.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
104.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
100.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
87.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
81.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
71.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
71.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
70.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
67.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
63.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
62.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
62.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
61.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
60.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
60.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
58.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
56.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
55.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
54.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
53.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
51.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
46.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
46.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
46.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
45.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
43.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
43.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
42.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
42.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
41.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
41.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
40.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
39.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
39.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
37.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
37.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
34.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
27.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
26.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
26.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
25.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
22.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
22.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
21.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
20.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
15.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
12.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
11.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
9.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
8.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
8.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
3.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
2.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COL1A1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1611.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
1220.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
1039.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
783.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
780.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
562.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
487.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
474.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
403.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
383.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
382.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
346.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
339.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
333.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
319.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
252.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
251.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
229.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
226.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
208.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
201.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
181.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
171.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
171.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
168.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
167.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
163.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
157.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
151.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
139.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
135.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
133.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
125.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
122.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
117.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
116.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
107.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
106.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
106.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
105.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
97.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
95.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
89.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
89.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
87.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
83.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
82.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
76.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
74.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
74.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
73.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
73.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
70.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
69.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
67.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
67.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
64.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
63.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
61.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
60.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
56.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
56.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
55.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
54.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
53.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
53.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
53.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
53.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
53.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
52.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
52.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
52.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
52.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
49.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
49.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
49.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
49.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
47.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
45.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
45.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
44.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
44.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
42.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
41.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
41.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
41.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
39.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
39.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
39.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
38.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
38.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
38.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
37.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
37.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
37.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
36.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
36.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
35.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
34.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
34.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
34.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
33.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
33.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
32.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
32.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
32.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
32.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
32.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
32.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
31.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
30.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
30.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
29.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
29.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
28.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
27.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
26.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
26.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
26.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
25.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
25.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
25.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
24.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
24.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
24.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
24.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
23.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
23.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
22.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
21.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
21.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
21.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
20.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
19.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
19.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
19.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
18.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
17.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
17.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
15.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
15.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
14.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
14.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
14.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
14.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
13.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
13.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
12.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
12.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
12.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
11.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
11.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
10.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
10.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
10.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
10.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
9.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
9.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
9.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
9.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
8.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
8.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
8.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
7.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
7.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
7.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
6.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
6.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
6.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
6.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
4.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
3.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
2.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078530001
Normal
2.9
CPT0088550004
Tumor
2.6
CPT0088500001
Normal
2.4
CPT0089460004
Tumor
1.9
CPT0015910003
Tumor
1.8
CPT0000780007
Tumor
1.7
CPT0078510003
Tumor
1.5
CPT0088780001
Normal
1.4
CPT0085670003
Tumor
1.3
CPT0092730003
Tumor
1.2
CPT0011240003
Tumor
1.1
CPT0092790003
Tumor
1.1
CPT0092190003
Normal
1.0
CPT0084560003
Tumor
1.0
CPT0088480003
Tumor
0.9
CPT0086820003
Tumor
0.9
CPT0088760003
Tumor
0.9
CPT0088630003
Tumor
0.9
CPT0000640003
Tumor
0.8
CPT0025880003
Tumor
0.8
CPT0066480003
Tumor
0.8
CPT0086870003
Tumor
0.8
CPT0076330003
Tumor
0.7
CPT0065690003
Tumor
0.7
CPT0025230003
Tumor
0.6
CPT0017850003
Tumor
0.6
CPT0025580004
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0014370004
Tumor
0.5
CPT0081600003
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0075560003
Tumor
0.5
CPT0065870003
Tumor
0.5
CPT0007860003
Tumor
0.5
CPT0007320003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0025290003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0078670001
Normal
0.4
CPT0081990003
Tumor
0.4
CPT0077320001
Normal
0.3
CPT0092290003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0025110003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0077310003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0014160003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0006900003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0019130003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0063630003
Tumor
-0.3
CPT0001510001
Normal
-0.3
CPT0012080003
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0075130003
Tumor
-0.3
CPT0001180009
Tumor
-0.4
CPT0086370003
Normal
-0.4
CPT0079380003
Tumor
-0.4
CPT0010170001
Normal
-0.4
CPT0069160003
Tumor
-0.4
CPT0010110003
Tumor
-0.5
CPT0089040001
Normal
-0.5
CPT0018250001
Normal
-0.5
CPT0009060003
Tumor
-0.5
CPT0000890001
Normal
-0.5
CPT0086950003
Tumor
-0.5
CPT0012280003
Tumor
-0.5
CPT0066520001
Normal
-0.5
CPT0002350011
Tumor
-0.5
CPT0075170001
Normal
-0.5
CPT0089480003
Normal
-0.6
CPT0092800003
Normal
-0.6
CPT0088570001
Normal
-0.6
CPT0020120003
Tumor
-0.6
CPT0065930003
Tumor
-0.6
CPT0065750003
Tumor
-0.6
CPT0000790001
Normal
-0.6
CPT0077110003
Tumor
-0.6
CPT0007470001
Normal
-0.6
CPT0002370001
Normal
-0.6
CPT0017410003
Tumor
-0.7
CPT0017450001
Normal
-0.7
CPT0088710001
Normal
-0.7
CPT0092310003
Normal
-0.7
CPT0079410003
Tumor
-0.7
CPT0012290003
Normal
-0.7
CPT0088970003
Tumor
-0.7
CPT0023350003
Tumor
-0.7
CPT0092160003
Tumor
-0.7
CPT0088640003
Normal
-0.7
CPT0001220008
Tumor
-0.7
CPT0088920001
Normal
-0.7
CPT0079510001
Normal
-0.7
CPT0087050003
Normal
-0.8
CPT0063640001
Normal
-0.8
CPT0081620001
Normal
-0.8
CPT0025610001
Normal
-0.8
CPT0078940001
Normal
-0.8
CPT0000870016
Tumor
-0.8
CPT0006950001
Normal
-0.8
CPT0012920003
Normal
-0.8
CPT0013790003
Normal
-0.8
CPT0078840001
Normal
-0.8
CPT0069010001
Normal
-0.9
CPT0001550001
Normal
-0.9
CPT0092740003
Normal
-0.9
CPT0012370003
Tumor
-0.9
CPT0014130001
Normal
-0.9
CPT0066430001
Normal
-0.9
CPT0020020001
Normal
-0.9
CPT0023710001
Normal
-1.0
CPT0075570001
Normal
-1.0
CPT0023360001
Normal
-1.0
CPT0001500009
Tumor
-1.0
CPT0014350001
Normal
-1.0
CPT0001350001
Normal
-1.0
CPT0077140001
Normal
-1.0
CPT0077500001
Normal
-1.0
CPT0019160001
Normal
-1.0
CPT0020130001
Normal
-1.0
CPT0006530001
Normal
-1.1
CPT0012090003
Normal
-1.1
CPT0078990003
Tumor
-1.1
CPT0012900004
Tumor
-1.1
CPT0079000001
Normal
-1.1
CPT0012640003
Normal
-1.1
CPT0069190001
Normal
-1.1
CPT0026410003
Tumor
-1.1
CPT0078830003
Tumor
-1.1
CPT0082010001
Normal
-1.1
CPT0015730003
Tumor
-1.1
CPT0026420001
Normal
-1.1
CPT0086890003
Normal
-1.2
CPT0063330001
Normal
-1.2
CPT0064370003
Tumor
-1.2
CPT0007870001
Normal
-1.2
CPT0081880003
Tumor
-1.2
CPT0011410003
Tumor
-1.2
CPT0009020003
Normal
-1.2
CPT0012770003
Normal
-1.2
CPT0064400001
Normal
-1.2
CPT0065810003
Tumor
-1.2
CPT0079300001
Normal
-1.2
CPT0006730001
Normal
-1.2
CPT0024680001
Normal
-1.2
CPT0025060001
Normal
-1.3
CPT0079430001
Normal
-1.3
CPT0012570003
Normal
-1.3
CPT0001190001
Normal
-1.3
CPT0009080003
Normal
-1.3
CPT0025920001
Normal
-1.3
CPT0065450001
Normal
-1.4
CPT0009000003
Tumor
-1.4
CPT0025050003
Tumor
-1.4
CPT0014450004
Tumor
-1.4
CPT0001230001
Normal
-1.5
CPT0076350001
Normal
-1.6
CPT0079180003
Tumor
-1.7
CPT0006440003
Tumor
-1.8
CPT0002270011
Tumor
-1.8
CPT0078800003
Tumor
-2.1
CPT0024670003
Tumor
-2.2
CPT0012180003
Tumor
-2.5
CPT0012550003
Tumor
-2.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.