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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGALS3BP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
153.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
369.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
291.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
287.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
279.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
269.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
262.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
239.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
234.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
233.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
228.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
224.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
215.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
215.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
215.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
213.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
211.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
200.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
198.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
192.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
192.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
192.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
191.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
185.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
183.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
176.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
173.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
172.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
170.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
161.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
157.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
155.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
152.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
152.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
150.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
143.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
139.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
138.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
137.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
133.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
128.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
125.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
120.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
120.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
120.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
115.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
115.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
109.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
99.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
97.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
97.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
93.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
91.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
84.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
79.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
70.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
60.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
59.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
51.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
46.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
35.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
28.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
26.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGALS3BP is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
254.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
1068.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
819.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
805.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
791.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
767.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
734.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
715.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
696.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
687.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
680.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
671.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
644.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
635.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
624.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
617.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
582.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
579.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
574.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
564.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
562.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
561.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
556.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
552.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
543.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
535.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
529.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
523.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
512.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
508.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
506.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
504.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
500.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
497.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
497.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
496.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
493.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
491.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
490.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
490.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
488.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
485.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
481.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
478.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
477.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
477.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
472.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
451.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
449.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
447.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
447.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
438.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
438.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
433.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
431.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
431.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
430.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
429.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
427.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
425.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
421.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
420.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
420.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
419.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
417.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
417.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
416.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
413.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
413.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
412.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
405.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
398.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
398.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
397.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
397.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
397.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
397.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
393.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
392.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
392.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
392.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
387.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
385.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
382.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
382.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
381.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
378.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
378.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
375.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
373.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
371.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
370.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
369.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
369.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
365.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
364.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
363.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
359.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
359.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
359.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
359.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
358.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
354.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
354.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
353.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
353.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
353.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
352.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
351.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
351.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
351.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
350.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
347.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
346.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
345.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
342.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
340.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
337.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
336.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
335.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
335.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
335.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
334.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
333.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
333.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
332.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
331.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
330.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
329.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
327.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
327.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
326.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
325.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
323.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
323.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
323.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
323.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
323.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
322.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
322.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
322.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
321.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
321.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
320.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
319.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
319.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
318.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
318.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
316.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
315.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
313.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
311.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
310.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
309.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
309.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
308.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
308.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
307.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
307.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
306.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
306.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
305.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
303.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
301.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
301.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
301.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
301.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
299.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
298.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
297.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
296.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
295.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
295.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
294.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
293.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
292.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
291.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
289.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
288.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
287.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
286.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
286.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
286.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
285.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
285.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
283.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
282.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
282.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
282.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
282.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
281.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
280.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
280.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
276.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
276.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
275.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
274.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
274.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
274.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
273.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
273.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
272.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
272.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
272.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
271.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
270.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
269.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
268.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
264.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
264.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
264.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
263.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
263.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
262.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
262.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
262.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
260.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
259.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
255.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
255.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
253.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
252.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
252.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
252.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
252.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
252.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
250.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
250.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
249.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
249.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
246.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
245.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
244.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
243.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
240.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
240.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
239.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
239.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
238.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
238.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
238.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
237.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
237.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
237.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
235.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
235.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
235.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
233.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
233.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
233.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
232.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
232.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
231.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
231.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
228.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
227.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
226.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
226.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
224.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
223.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
223.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
222.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
222.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
221.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
221.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
221.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
221.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
221.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
220.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
220.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
219.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
218.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
218.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
218.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
218.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
217.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
215.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
215.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
214.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
214.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
214.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
213.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
213.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
211.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
211.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
210.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
210.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
209.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
209.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
208.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
208.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
207.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
205.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
204.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
204.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
203.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
201.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
200.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
200.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
200.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
200.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
199.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
198.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
198.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
198.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
197.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
196.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
196.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
196.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
196.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
194.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
194.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
194.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
194.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
194.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
192.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
191.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
191.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
191.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
191.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
191.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
190.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
190.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
190.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
189.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
189.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
188.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
187.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
187.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
187.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
185.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
185.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
183.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
182.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
182.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
181.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
181.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
180.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
180.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
179.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
179.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
179.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
177.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
176.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
175.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
174.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
174.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
173.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
173.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
173.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
173.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
172.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
172.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
171.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
171.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
170.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
170.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
170.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
169.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
169.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
169.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
168.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
165.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
165.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
165.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
165.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
164.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
164.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
164.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
163.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
163.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
162.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
162.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
162.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
161.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
161.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
161.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
161.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
161.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
160.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
160.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
160.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
159.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
159.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
159.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
158.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
154.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
154.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
152.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
150.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
149.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
148.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
148.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
147.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
147.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
147.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
147.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
146.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
146.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
145.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
145.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
144.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
144.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
144.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
144.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
143.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
142.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
142.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
141.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
141.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
140.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
140.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
139.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
138.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
138.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
136.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
134.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
134.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
133.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
133.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
132.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
132.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
131.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
131.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
130.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
130.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
130.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
129.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
127.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
127.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
125.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
124.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
123.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
123.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
122.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
121.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
120.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
120.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
119.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
119.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
118.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
118.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
116.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
115.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
115.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
114.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
114.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
114.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
113.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
113.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
113.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
112.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
111.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
111.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
108.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
108.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
107.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
106.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
105.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
105.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
103.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
102.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
101.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
101.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
101.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
101.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
101.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
99.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
96.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
95.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
95.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
94.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
94.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
94.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
92.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
88.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
85.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
85.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
84.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
84.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
82.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
81.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
78.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
77.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
77.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
77.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
75.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
75.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
74.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
73.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
73.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
73.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
72.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
71.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
71.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
70.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
70.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
67.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
66.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
66.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
66.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
66.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
64.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
62.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
62.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
62.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
61.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
59.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
57.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
53.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
52.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
52.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
52.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
49.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
48.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
43.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
43.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
38.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
33.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
32.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
30.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGALS3BP is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
291.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
1381.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
915.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
829.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
720.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
663.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
604.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
600.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
582.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
547.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
532.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
521.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
498.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
497.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
472.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
446.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
436.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
417.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
406.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
404.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
402.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
397.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
397.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
378.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
373.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
365.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
341.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
335.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
332.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
325.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
324.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
322.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
315.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
312.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
290.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
286.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
285.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
283.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
278.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
272.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
270.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
266.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
263.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
260.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
260.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
256.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
256.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
254.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
247.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
244.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
243.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
241.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
240.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
237.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
231.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
230.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
229.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
228.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
226.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
225.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
224.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
223.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
223.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
221.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
218.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
216.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
214.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
207.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
204.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
202.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
200.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
195.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
193.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
193.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
191.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
191.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
183.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
181.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
179.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
179.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
165.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
131.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
130.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
130.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
128.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
127.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
121.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
110.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
106.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
102.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
101.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
92.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
89.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
88.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
76.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
73.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
68.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
66.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
58.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
51.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGALS3BP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
382.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
2214.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1174.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
1147.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1112.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1111.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
1083.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
1069.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
1066.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
1057.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
1010.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
996.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
971.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
926.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
875.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
874.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
801.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
797.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
796.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
794.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
783.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
783.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
783.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
777.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
775.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
764.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
751.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
743.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
729.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
723.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
718.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
714.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
701.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
700.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
696.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
693.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
689.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
676.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
655.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
647.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
645.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
644.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
633.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
626.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
619.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
598.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
581.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
578.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
577.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
569.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
566.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
563.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
560.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
552.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
545.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
537.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
537.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
532.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
532.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
531.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
529.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
528.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
522.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
521.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
518.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
518.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
512.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
507.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
501.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
498.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
496.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
493.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
490.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
489.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
482.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
480.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
474.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
473.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
469.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
466.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
465.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
465.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
464.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
456.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
452.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
450.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
450.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
445.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
443.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
442.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
438.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
436.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
436.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
433.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
430.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
428.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
423.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
420.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
419.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
416.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
410.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
402.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
400.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
399.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
395.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
393.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
392.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
391.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
389.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
388.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
388.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
387.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
387.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
384.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
380.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
378.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
375.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
369.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
368.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
359.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
356.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
354.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
354.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
351.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
350.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
349.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
349.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
348.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
344.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
342.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
342.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
342.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
341.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
339.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
338.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
335.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
333.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
333.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
328.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
327.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
324.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
323.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
322.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
321.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
321.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
320.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
319.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
318.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
314.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
314.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
313.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
307.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
306.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
305.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
305.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
303.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
298.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
297.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
297.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
297.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
295.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
293.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
290.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
288.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
288.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
287.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
286.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
284.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
284.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
283.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
283.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
282.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
280.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
279.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
278.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
271.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
271.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
265.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
264.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
263.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
258.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
256.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
256.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
255.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
253.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
252.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
252.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
251.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
250.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
249.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
245.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
244.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
244.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
242.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
242.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
237.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
235.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
231.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
229.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
228.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
227.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
226.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
226.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
222.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
222.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
222.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
221.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
220.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
220.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
218.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
215.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
215.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
215.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
214.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
210.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
207.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
199.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
198.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
196.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
191.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
191.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
189.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
188.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
186.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
184.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
182.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
181.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
181.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
179.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
179.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
178.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
175.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
173.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
172.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
172.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
168.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
166.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
166.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
161.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
160.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
159.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
159.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
156.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
154.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
148.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
146.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
145.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
145.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
145.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
141.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
139.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
138.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
133.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
131.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
130.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
121.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
112.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
108.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
104.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
102.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
102.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
100.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
95.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
88.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
82.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
79.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
75.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
75.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
69.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
62.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
54.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
52.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
47.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
44.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
34.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
26.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
20.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
2.0
CPT0084560003
Tumor
1.7
CPT0012290003
Normal
1.4
CPT0024680001
Normal
1.4
CPT0010120001
Normal
1.2
CPT0077500001
Normal
0.9
CPT0066520001
Normal
0.9
CPT0075170001
Normal
0.9
CPT0011410003
Tumor
0.9
CPT0084590001
Normal
0.8
CPT0002370001
Normal
0.8
CPT0092190003
Normal
0.7
CPT0012920003
Normal
0.7
CPT0063330001
Normal
0.7
CPT0014470001
Normal
0.7
CPT0014160003
Tumor
0.6
CPT0017850003
Tumor
0.6
CPT0000890001
Normal
0.6
CPT0009020003
Normal
0.6
CPT0065750003
Tumor
0.5
CPT0077320001
Normal
0.5
CPT0081990003
Tumor
0.5
CPT0077140001
Normal
0.5
CPT0069190001
Normal
0.4
CPT0086970003
Normal
0.4
CPT0092730003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0065820001
Normal
0.4
CPT0079180003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0023350003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0025290003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0020130001
Normal
0.3
CPT0075130003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0088500001
Normal
0.3
CPT0020120003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0079510001
Normal
0.2
CPT0078800003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0065690003
Tumor
0.2
CPT0006730001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0086030003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0013790003
Normal
0.1
CPT0078510003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0001340003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0066480003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0087040003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0025880003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0000870016
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0000640003
Tumor
-0.2
CPT0023360001
Normal
-0.2
CPT0014130001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0010110003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0079380003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0081620001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0001350001
Normal
-0.3
CPT0025230003
Tumor
-0.3
CPT0082010001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0079270003
Tumor
-0.3
CPT0025610001
Normal
-0.3
CPT0088760003
Tumor
-0.3
CPT0015810003
Tumor
-0.4
CPT0065450001
Normal
-0.4
CPT0078930003
Tumor
-0.4
CPT0092740003
Normal
-0.4
CPT0017450001
Normal
-0.4
CPT0065810003
Tumor
-0.4
CPT0079430001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0001500009
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0088780001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0081600003
Tumor
-0.5
CPT0088640003
Normal
-0.5
CPT0086870003
Tumor
-0.5
CPT0078840001
Normal
-0.5
CPT0026420001
Normal
-0.5
CPT0085670003
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0079480003
Tumor
-0.5
CPT0023710001
Normal
-0.6
CPT0079000001
Normal
-0.6
CPT0000780007
Tumor
-0.6
CPT0025350003
Tumor
-0.6
CPT0078830003
Tumor
-0.6
CPT0006440003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0078990003
Tumor
-0.7
CPT0012080003
Tumor
-0.7
CPT0025110003
Tumor
-0.7
CPT0079410003
Tumor
-0.7
CPT0007470001
Normal
-0.7
CPT0019130003
Tumor
-0.7
CPT0088630003
Tumor
-0.7
CPT0010160003
Tumor
-0.7
CPT0088550004
Tumor
-0.7
CPT0014370004
Tumor
-0.8
CPT0012370003
Tumor
-0.8
CPT0077490003
Tumor
-0.9
CPT0014450004
Tumor
-1.0
CPT0006630003
Tumor
-1.0
CPT0026410003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.