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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYNGR2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
123.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
105.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
104.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
102.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
83.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
83.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
82.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
79.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
73.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
73.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
71.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
66.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
65.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
65.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
62.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
62.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
62.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
62.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
55.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
54.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
53.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
53.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
51.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
51.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
51.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
50.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
49.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
48.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
48.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
47.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
47.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
47.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
47.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
46.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
46.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
45.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
45.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
45.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
44.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
44.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
44.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
44.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
44.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
43.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
42.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
41.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
40.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
39.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
39.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
38.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
36.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
36.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
33.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
32.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
32.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
30.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
29.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
27.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
27.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
25.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYNGR2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
135.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
375.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
361.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
318.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
307.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
302.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
297.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
290.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
282.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
279.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
278.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
270.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
268.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
267.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
259.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
257.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
255.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
255.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
248.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
248.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
247.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
246.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
245.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
241.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
240.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
237.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
234.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
230.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
226.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
225.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
223.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
221.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
219.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
217.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
216.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
215.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
215.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
212.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
210.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
208.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
208.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
208.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
208.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
208.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
207.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
207.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
204.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
203.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
203.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
200.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
199.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
199.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
197.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
197.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
196.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
195.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
193.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
193.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
192.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
192.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
192.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
191.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
190.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
190.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
190.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
190.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
188.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
187.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
186.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
185.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
185.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
185.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
185.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
184.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
184.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
183.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
183.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
183.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
182.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
182.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
181.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
181.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
181.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
180.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
180.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
180.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
179.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
179.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
178.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
177.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
177.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
176.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
175.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
175.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
173.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
173.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
173.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
173.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
172.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
172.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
170.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
170.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
170.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
170.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
169.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
169.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
168.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
168.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
167.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
167.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
167.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
166.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
165.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
165.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
165.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
164.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
164.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
164.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
164.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
164.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
164.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
163.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
163.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
163.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
162.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
162.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
162.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
161.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
160.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
160.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
160.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
160.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
159.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
159.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
159.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
158.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
158.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
158.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
157.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
157.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
157.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
157.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
156.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
156.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
156.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
156.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
156.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
155.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
155.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
155.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
154.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
154.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
153.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
152.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
152.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
152.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
152.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
151.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
151.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
151.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
151.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
151.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
151.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
151.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
151.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
150.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
150.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
150.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
150.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
149.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
149.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
149.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
149.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
148.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
148.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
148.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
148.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
147.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
147.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
147.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
147.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
147.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
146.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
146.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
146.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
146.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
145.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
145.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
145.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
145.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
145.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
144.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
144.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
144.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
144.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
144.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
144.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
144.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
143.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
142.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
142.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
142.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
142.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
142.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
142.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
142.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
142.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
141.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
141.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
141.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
140.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
140.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
140.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
140.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
140.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
140.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
140.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
140.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
140.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
140.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
139.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
139.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
139.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
138.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
138.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
138.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
138.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
138.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
138.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
138.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
137.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
137.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
137.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
136.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
136.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
135.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
135.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
135.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
135.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
135.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
135.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
135.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
135.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
134.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
134.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
134.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
133.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
133.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
133.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
133.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
133.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
132.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
132.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
132.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
132.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
132.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
132.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
132.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
132.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
132.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
131.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
131.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
131.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
131.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
130.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
130.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
130.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
130.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
130.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
130.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
130.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
130.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
130.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
130.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
129.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
129.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
129.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
129.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
129.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
129.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
128.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
128.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
128.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
128.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
128.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
128.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
128.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
128.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
128.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
127.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
127.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
127.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
127.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
127.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
126.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
126.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
125.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
125.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
124.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
124.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
124.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
124.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
124.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
124.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
124.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
123.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
123.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
123.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
122.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
122.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
122.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
122.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
122.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
121.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
121.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
121.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
121.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
121.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
120.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
120.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
120.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
120.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
120.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
119.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
119.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
119.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
118.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
118.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
118.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
118.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
117.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
117.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
117.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
116.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
116.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
114.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
114.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
114.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
114.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
113.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
113.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
113.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
113.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
113.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
112.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
112.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
112.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
112.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
112.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
111.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
111.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
111.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
111.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
110.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
110.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
109.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
109.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
109.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
109.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
108.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
108.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
108.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
108.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
108.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
107.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
107.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
107.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
107.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
107.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
107.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
107.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
106.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
106.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
106.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
106.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
105.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
105.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
105.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
105.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
105.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
104.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
104.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
104.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
104.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
104.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
104.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
103.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
103.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
102.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
102.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
102.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
101.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
101.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
101.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
100.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
100.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
100.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
100.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
100.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
100.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
100.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
100.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
99.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
99.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
99.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
99.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
98.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
98.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
98.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
97.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
97.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
97.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
97.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
96.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
96.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
95.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
95.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
95.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
95.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
95.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
94.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
94.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
94.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
93.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
93.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
93.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
93.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
92.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
92.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
91.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
91.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
91.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
90.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
89.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
89.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
89.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
89.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
88.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
88.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
87.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
87.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
87.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
87.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
86.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
86.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
86.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
86.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
85.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
84.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
84.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
84.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
83.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
82.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
82.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
82.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
81.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
81.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
81.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
80.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
80.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
80.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
79.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
78.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
78.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
77.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
77.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
76.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
74.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
74.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
74.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
73.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
73.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
73.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
73.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
73.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
73.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
72.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
72.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
72.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
71.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
70.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
70.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
70.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
69.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
68.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
68.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
67.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
65.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
64.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
63.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
63.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
62.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
60.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
60.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
57.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
57.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
57.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
56.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
55.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
55.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
55.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
54.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
53.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
53.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
52.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
51.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
51.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
50.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
49.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
48.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
46.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
43.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
43.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
37.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
37.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
36.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
34.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
33.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
24.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
24.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
17.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYNGR2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
132.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
310.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
262.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
222.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
216.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
211.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
208.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
207.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
207.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
206.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
204.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
197.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
193.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
186.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
178.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
176.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
176.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
175.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
172.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
169.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
168.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
161.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
160.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
160.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
160.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
160.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
158.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
158.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
158.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
156.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
156.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
155.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
154.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
148.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
148.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
146.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
146.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
145.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
143.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
141.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
138.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
136.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
135.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
134.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
134.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
134.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
133.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
132.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
131.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
130.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
129.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
128.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
128.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
127.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
127.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
127.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
125.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
123.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
122.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
122.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
121.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
119.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
119.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
118.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
118.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
117.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
115.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
112.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
110.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
109.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
108.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
107.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
107.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
101.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
99.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
98.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
97.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
96.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
95.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
94.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
93.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
93.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
93.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
92.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
90.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
89.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
88.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
87.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
85.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
85.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
82.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
78.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
77.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
66.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
56.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
54.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
49.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
48.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
45.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
43.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYNGR2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
204.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
844.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
558.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
490.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
423.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
422.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
394.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
392.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
383.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
381.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
374.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
371.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
365.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
353.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
352.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
348.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
346.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
343.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
341.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
341.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
340.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
339.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
339.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
336.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
332.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
327.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
324.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
316.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
315.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
313.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
309.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
308.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
306.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
306.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
304.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
302.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
299.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
297.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
296.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
290.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
287.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
285.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
285.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
284.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
280.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
280.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
275.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
272.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
271.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
269.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
267.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
266.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
266.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
265.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
265.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
262.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
260.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
258.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
254.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
252.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
252.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
251.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
247.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
247.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
245.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
245.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
244.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
243.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
243.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
242.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
242.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
242.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
241.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
239.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
239.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
239.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
238.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
238.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
237.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
236.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
236.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
236.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
234.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
231.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
231.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
230.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
229.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
229.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
228.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
227.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
227.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
226.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
226.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
226.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
225.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
224.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
224.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
223.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
220.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
219.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
218.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
217.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
217.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
216.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
215.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
215.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
214.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
214.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
213.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
213.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
213.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
212.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
211.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
211.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
209.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
209.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
209.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
209.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
208.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
208.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
208.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
206.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
205.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
204.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
203.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
203.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
203.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
202.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
201.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
201.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
201.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
200.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
200.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
200.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
200.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
199.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
198.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
197.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
197.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
197.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
196.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
194.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
194.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
194.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
193.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
193.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
192.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
192.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
192.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
191.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
191.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
191.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
190.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
190.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
189.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
189.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
188.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
187.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
186.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
185.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
185.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
184.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
184.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
183.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
183.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
183.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
183.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
182.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
182.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
182.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
180.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
179.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
179.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
179.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
178.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
177.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
175.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
175.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
175.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
174.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
173.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
173.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
173.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
172.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
171.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
171.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
170.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
169.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
169.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
168.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
167.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
165.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
163.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
162.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
161.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
161.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
161.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
160.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
160.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
158.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
158.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
157.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
156.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
155.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
155.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
155.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
154.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
152.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
152.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
151.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
147.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
147.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
146.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
142.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
141.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
140.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
140.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
140.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
139.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
139.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
138.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
136.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
135.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
135.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
135.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
135.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
133.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
132.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
132.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
132.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
130.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
129.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
128.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
128.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
127.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
126.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
125.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
125.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
123.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
122.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
122.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
121.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
121.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
118.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
118.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
117.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
115.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
113.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
113.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
112.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
110.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
110.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
110.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
110.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
109.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
109.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
108.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
107.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
105.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
105.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
104.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
104.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
103.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
103.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
103.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
101.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
100.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
86.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
86.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
85.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
82.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
78.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
73.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
72.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
67.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
65.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
58.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
49.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
47.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
47.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
46.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
28.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
28.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086950003
Tumor
1.1
CPT0025050003
Tumor
1.0
CPT0023350003
Tumor
1.0
CPT0014450004
Tumor
0.9
CPT0015730003
Tumor
0.8
CPT0001180009
Tumor
0.8
CPT0000640003
Tumor
0.7
CPT0086820003
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0025110003
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0088480003
Tumor
0.6
CPT0077310003
Tumor
0.6
CPT0079410003
Tumor
0.6
CPT0079270003
Tumor
0.5
CPT0010110003
Tumor
0.5
CPT0088900003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0069190001
Normal
0.5
CPT0078990003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0092160003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0086360003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0076330003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0001260009
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0079380003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0001230001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0025920001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0075170001
Normal
-0.3
CPT0021240003
Tumor
-0.3
CPT0082010001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0092730003
Tumor
-0.3
CPT0079430001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0066480003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0000790001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0019130003
Tumor
-0.3
CPT0006730001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0000660001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0010120001
Normal
-0.4
CPT0078660003
Tumor
-0.4
CPT0014130001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0077500001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0069000003
Tumor
-0.4
CPT0084560003
Tumor
-0.4
CPT0026420001
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0017850003
Tumor
-0.4
CPT0063640001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0078670001
Normal
-0.5
CPT0001350001
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0006630003
Tumor
-0.5
CPT0006530001
Normal
-0.5
CPT0012290003
Normal
-0.5
CPT0002270011
Tumor
-0.5
CPT0069010001
Normal
-0.5
CPT0088920001
Normal
-0.5
CPT0065930003
Tumor
-0.5
CPT0079000001
Normal
-0.6
CPT0013790003
Normal
-0.6
CPT0009080003
Normal
-0.6
CPT0087050003
Normal
-0.6
CPT0009060003
Tumor
-0.6
CPT0075570001
Normal
-0.6
CPT0000890001
Normal
-0.6
CPT0086970003
Normal
-0.6
CPT0092740003
Normal
-0.6
CPT0012770003
Normal
-0.8
CPT0078530001
Normal
-0.8
CPT0012090003
Normal
-0.8
CPT0088970003
Tumor
-0.8
CPT0012570003
Normal
-0.9
CPT0079180003
Tumor
-0.9
CPT0089040001
Normal
-0.9
CPT0018250001
Normal
-1.0
CPT0024680001
Normal
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
