Expression of SYNGR2 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

SYNGR2 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 94.18

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

95.8

Number of samples

362

Samples

Sample	Description	TPM
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	441.1
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	368.5
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	336.0
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	316.9
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	296.6
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	289.3
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	286.6
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	283.9
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	281.2
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	279.3
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	268.8
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	261.8
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	255.0
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	253.6
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	247.1
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	224.5
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	214.4
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	212.7
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	207.9
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	205.9
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	204.7
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	199.0
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	197.9
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	193.3
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	192.4
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	192.2
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	191.7
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	186.6
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	186.0
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	183.9
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	181.7
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	181.7
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	179.1
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	179.1
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	177.9
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	174.0
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	171.0
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	170.8
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	170.1
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	169.2
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	165.9
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	162.7
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	162.1
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	159.6
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	156.8
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	152.4
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	150.0
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	147.7
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	146.8
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	144.5
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	144.2
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	143.9
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	143.6
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	141.9
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	141.6
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	141.4
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	140.0
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	139.8
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	138.6
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	138.1
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	136.1
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	135.5
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	134.7
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	134.3
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	133.4
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	132.1
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	128.4
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	127.9
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	127.1
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	126.2
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	125.1
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	124.9
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	121.2
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	120.7
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	120.6
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	119.8
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	117.8
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	117.1
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	116.7
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	115.3
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	114.7
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	113.5
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	113.4
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	113.2
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	112.7
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	112.7
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	112.5
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	112.4
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	111.9
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	111.6
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	111.5
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	111.3
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	110.9
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	110.9
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	110.5
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	110.3
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	110.3
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	108.7
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	108.7
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	108.5
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	108.5
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	108.4
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	108.1
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	107.7
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	107.0
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	105.7
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	105.6
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	103.0
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	103.0
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	102.6
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	102.3
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	102.0
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	101.7
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	101.6
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	100.9
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	100.6
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	100.3
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	100.2
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	100.0
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	100.0
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	99.4
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	99.2
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	98.2
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	98.1
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	96.7
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	96.3
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	95.6
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	95.2
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	94.9
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	94.7
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	94.3
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	94.0
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	93.9
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	93.4
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	93.4
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	93.0
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	90.6
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	90.4
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	90.4
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	89.1
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	88.7
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	88.3
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	88.1
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	88.1
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	88.1
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	87.7
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	87.5
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	87.1
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	86.9
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	86.5
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	86.1
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	85.9
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	85.6
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	85.6
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	85.5
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	85.4
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	85.4
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	85.3
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	84.9
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	84.8
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	84.4
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	84.3
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	84.2
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	84.0
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	83.9
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	82.8
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	82.6
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	82.5
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	82.3
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	81.7
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	81.7
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	81.4
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	80.9
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	80.9
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	80.8
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	80.8
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	80.8
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	80.4
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	79.7
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	79.3
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	79.0
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	78.4
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	77.9
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	77.6
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	76.5
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	76.4
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	76.3
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	76.0
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	75.5
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	75.5
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	75.2
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	75.2
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	75.2
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	75.0
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	74.9
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	74.5
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	74.5
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	73.7
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	73.5
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	73.4
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	73.0
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	72.9
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	72.8
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	72.6
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	72.2
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	71.8
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	71.7
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	71.7
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	71.1
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	70.9
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	70.8
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	70.7
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	69.8
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	69.6
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	69.5
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	69.4
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	69.4
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	69.3
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	69.3
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	69.1
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	68.9
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	68.5
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	68.5
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	68.2
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	68.2
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	68.1
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	68.0
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	68.0
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	67.9
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	67.3
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	67.2
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	67.1
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	67.0
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	66.6
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	66.6
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	66.4
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	66.3
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	66.1
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	66.0
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	65.7
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	65.5
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	65.1
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	65.0
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	64.3
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	64.2
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	64.0
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	63.8
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	63.6
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	63.5
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	63.4
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	63.4
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	62.9
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	62.8
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	62.7
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	62.6
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	61.5
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	61.4
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	60.9
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	60.5
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	60.5
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	60.3
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	60.2
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	60.2
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	60.2
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	60.2
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	60.0
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	59.9
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	59.8
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	59.7
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	59.4
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	59.0
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	58.9
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	58.8
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	58.7
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	58.7
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	58.6
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	58.4
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	58.3
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	58.1
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	57.7
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	57.6
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	57.6
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	57.3
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	57.3
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	56.8
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	56.8
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	56.5
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	56.3
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	56.0
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	55.5
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	55.0
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	54.8
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	53.8
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	53.5
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	52.8
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	52.5
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	52.1
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	52.1
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	52.1
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	52.1
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	51.7
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	51.7
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	51.6
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	51.5
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	51.3
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	51.1
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	50.7
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	50.5
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	50.1
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	50.0
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	50.0
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	49.8
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	49.7
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	49.6
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	49.5
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	49.3
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	49.2
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	49.0
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	48.9
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	47.8
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	47.6
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	47.2
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	47.0
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	46.7
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	45.4
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	45.3
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	45.2
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	45.1
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	45.0
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	44.2
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	43.3
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	42.9
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	42.9
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	42.6
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	42.1
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	41.4
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	40.4
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	39.8
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	39.7
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	39.4
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	39.1
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	39.1
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	37.4
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	37.2
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	36.9
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	35.9
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	35.7
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	35.5
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	35.4
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	35.1
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	34.8
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	34.4
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	33.5
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	33.3
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	32.9
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	31.8
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	31.6
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	31.4
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	31.2
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	29.2
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	28.0
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	27.6
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

SYNGR2 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 66.84

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

64.5

Number of samples

231

Samples

Sample	Description	TPM
DO45093	0 years, male, NA, stage:2, dead, 720 days	370.5
DO45245	0 years, female, NA, stage:2, dead, 240 days	349.6
DO45301	0 years, male, NA, stage:2, dead, 1440 days	236.0
DO45283	0 years, male, NA, stage:3, alive, 510 days	230.5
DO45307	0 years, female, NA, stage:4, dead, 240 days	209.9
DO45299	0 years, female, NA, stage:1, alive, 1440 days	190.4
DO48681	0 years, male, NA, stage:2, alive, 900 days	189.5
DO45277	0 years, male, NA, stage:3, alive, 600 days	185.5
DO48741	0 years, male, NA, stage:3, alive, 240 days	180.2
DO45303	0 years, female, NA, stage:3, alive, 990 days	161.9
DO45211	0 years, male, NA, stage:3, alive, 240 days	158.1
DO48747	0 years, male, NA, stage:3, alive, 540 days	157.7
DO45297	0 years, female, NA, stage:4, dead, 1260 days	151.2
DO45285	0 years, male, NA, stage:3, alive, 480 days	144.5
DO45305	0 years, male, NA, stage:4, alive, 300 days	140.3
DO45275	0 years, male, NA, stage:3, dead, 10 days	139.5
DO45185	0 years, male, NA, stage:2, alive, 600 days	138.5
DO50840	0 years, male, NA, stage:2, alive, 330 days	134.4
DO45287	0 years, male, NA, stage:1, alive, 390 days	134.2
DO45131	0 years, male, NA, stage:4, dead, 360 days	133.9
DO45249	0 years, male, NA, stage:1, alive, 630 days	128.2
DO48737	0 years, male, NA, stage:1, alive, 720 days	128.0
DO50806	0 years, male, NA, stage:4, alive, 540 days	125.1
DO45193	0 years, female, NA, stage:4, dead, 120 days	123.1
DO50829	0 years, male, NA, stage:3, alive, 570 days	119.2
DO48732	0 years, male, NA, stage:3, alive, 630 days	117.3
DO23523	0 years, male, NA, stage:3, alive, 1080 days	113.8
DO23511	0 years, female, NA, stage:3, dead, 180 days	113.4
DO45205	0 years, female, NA, stage:2, dead, 90 days	112.3
DO45289	0 years, female, NA, stage:3, alive, 360 days	104.8
DO48697	0 years, female, NA, stage:2, dead, 810 days	104.0
DO50785	0 years, male, NA, stage:4, dead, 90 days	97.3
DO45279	0 years, male, NA, stage:3, alive, 1290 days	96.9
DO45209	0 years, male, NA, stage:4, alive, 1350 days	95.9
DO50809	0 years, male, NA, stage:3, dead, 720 days	95.6
DO45139	0 years, male, NA, stage:3, alive, 1320 days	95.0
DO45273	0 years, male, NA, stage:2, alive, 480 days	94.7
DO45267	0 years, male, NA, stage:3, dead, 570 days	92.6
DO23526	0 years, male, NA, stage:3, alive, 1050 days	91.5
DO23519	0 years, male, NA, stage:3, alive, 630 days	90.7
DO45127	0 years, male, NA, stage:3, dead, 420 days	85.9
DO50778	0 years, male, NA, stage:4, alive, 630 days	85.6
DO50819	0 years, female, NA, stage:2, alive, 510 days	85.4
DO23525	0 years, male, NA, stage:4, alive, 1050 days	84.3
DO23515	0 years, male, NA, stage:2, alive, 1230 days	82.1
DO45115	0 years, male, NA, stage:2, alive, 840 days	81.8
DO45092	0 years, male, NA, stage:4, dead, 1200 days	81.3
DO48730	0 years, female, NA, stage:2, alive, 630 days	81.1
DO45251	0 years, female, NA, stage:2, alive, 900 days	80.7
DO48720	0 years, female, NA, stage:2, alive, 570 days	79.6
DO45161	0 years, male, NA, stage:2, dead, 540 days	76.8
DO45153	0 years, female, NA, stage:2, alive, 1380 days	76.7
DO50825	0 years, male, NA, stage:2, alive, 390 days	76.6
DO50805	0 years, male, NA, stage:2, alive, 690 days	75.3
DO50813	0 years, male, NA, stage:2, alive, 420 days	75.2
DO23530	0 years, male, NA, stage:4, dead, 180 days	74.3
DO50855	0 years, male, NA, stage:2, alive, 570 days	73.2
DO48679	0 years, male, NA, stage:2, alive, 1200 days	73.0
DO23547	0 years, male, NA, stage:1, alive, 1020 days	72.9
DO48717	0 years, male, NA, stage:4, dead, 180 days	72.5
DO48701	0 years, male, NA, stage:2, alive, 780 days	72.1
DO45259	0 years, male, NA, stage:3, alive, 330 days	72.0
DO23535	0 years, male, NA, stage:1, alive, 960 days	71.8
DO48716	0 years, male, NA, stage:2, alive, 720 days	70.9
DO23540	0 years, male, NA, stage:1, alive, 750 days	69.9
DO23516	0 years, male, NA, stage:3, dead, 20 days	69.7
DO45281	0 years, male, NA, stage:4, alive, 750 days	67.6
DO45119	0 years, male, NA, stage:3, dead, 510 days	67.1
DO45213	0 years, male, NA, stage:1, alive, 1200 days	66.5
DO45165	0 years, male, NA, stage:2, alive, 690 days	66.4
DO45163	0 years, male, NA, stage:2, alive, 960 days	66.3
DO45269	0 years, male, NA, stage:3, alive, 750 days	66.1
DO50818	0 years, male, NA, stage:2, alive, 510 days	65.9
DO45241	0 years, male, NA, stage:1, alive, 1080 days	65.9
DO45157	0 years, male, NA, stage:2, alive, 1980 days	65.5
DO23539	0 years, male, NA, stage:1, alive, 1110 days	64.8
DO48704	0 years, female, NA, stage:3, alive, 750 days	64.4
DO48723	0 years, male, NA, stage:1, alive, 600 days	63.7
DO45263	0 years, male, NA, stage:3, dead, 270 days	62.4
DO45095	0 years, male, NA, stage:2, alive, 1620 days	62.3
DO45149	0 years, female, NA, stage:2, alive, 1260 days	62.2
DO23549	0 years, male, NA, stage:3, alive, 990 days	61.7
DO45235	0 years, female, NA, stage:1, alive, 900 days	61.2
DO48700	0 years, female, NA, stage:2, alive, 810 days	60.6
DO45217	0 years, female, NA, stage:3, dead, 270 days	60.3
DO45225	0 years, male, NA, stage:1, alive, 1050 days	58.9
DO48721	0 years, female, NA, stage:1, alive, 900 days	58.3
DO45231	0 years, male, NA, stage:2, alive, 930 days	58.1
DO45243	0 years, female, NA, stage:3, alive, 930 days	57.1
DO48695	0 years, male, NA, stage:2, alive, 720 days	56.8
DO48746	0 years, male, NA, stage:3, alive, 570 days	56.5
DO45141	0 years, male, NA, stage:2, alive, 1320 days	56.0
DO50832	0 years, male, NA, stage:3, alive, 90 days	55.7
DO50808	0 years, male, NA, stage:2, alive, 570 days	55.6
DO45155	0 years, male, NA, stage:2, alive, 2160 days	55.6
DO50799	0 years, female, NA, stage:2, alive, 540 days	55.5
DO45221	0 years, female, NA, stage:4, dead, 390 days	55.0
DO23524	0 years, female, NA, stage:2, alive, 1050 days	54.6
DO50811	0 years, male, NA, stage:1, alive, 450 days	54.5
DO50787	0 years, male, NA, stage:3, alive, 480 days	54.2
DO23510	0 years, female, NA, stage:2, alive, 870 days	54.1
DO45255	0 years, male, NA, stage:3, alive, 720 days	52.9
DO48742	0 years, male, NA, stage:2, alive, 600 days	52.9
DO23528	0 years, female, NA, stage:2, alive, 1020 days	52.6
DO50814	0 years, male, NA, stage:3, alive, 420 days	52.6
DO48736	0 years, female, NA, stage:1, alive, 600 days	52.4
DO50791	0 years, female, NA, stage:1, dead, 480 days	52.0
DO23533	0 years, male, NA, stage:2, alive, 900 days	51.2
DO50798	0 years, male, NA, stage:3, dead, 30 days	51.2
DO45219	0 years, male, NA, stage:2, alive, 1080 days	50.8
DO45229	0 years, male, NA, stage:1, alive, 990 days	50.8
DO48757	0 years, female, NA, stage:3, alive, 480 days	50.7
DO50820	0 years, female, NA, stage:3, alive, 510 days	50.4
DO23508	0 years, female, NA, stage:2, alive, 390 days	50.4
DO45145	0 years, male, NA, stage:3, dead, 60 days	50.3
DO45239	0 years, male, NA, stage:2, alive, 870 days	49.8
DO48712	0 years, male, NA, stage:2, alive, 810 days	49.8
DO50816	0 years, male, NA, stage:2, alive, 390 days	49.8
DO50850	0 years, male, NA, stage:3, alive, 720 days	49.5
DO45253	0 years, male, NA, stage:2, alive, 870 days	49.4
DO45179	0 years, female, NA, stage:2, alive, 600 days	49.4
DO45105	0 years, male, NA, stage:1, alive, 1680 days	49.3
DO48743	0 years, female, NA, stage:2, alive, 570 days	48.1
DO48759	0 years, male, NA, stage:3, alive, 720 days	47.9
DO45103	0 years, male, NA, stage:3, alive, 450 days	47.4
DO23537	0 years, male, NA, stage:2, dead, 900 days	47.2
DO23552	0 years, female, NA, stage:1, alive, 810 days	47.0
DO45121	0 years, male, NA, stage:3, alive, 1530 days	46.9
DO45113	0 years, male, NA, stage:3, alive, 1560 days	46.8
DO50803	0 years, female, NA, stage:1, alive, 540 days	46.7
DO45143	0 years, male, NA, stage:3, alive, 1290 days	46.6
DO50789	0 years, female, NA, stage:2, alive, 570 days	46.3
DO50783	0 years, male, NA, stage:3, alive, 480 days	46.2
DO50800	0 years, male, NA, stage:2, alive, 510 days	46.0
DO48682	0 years, female, NA, stage:3, dead, 120 days	45.9
DO45261	0 years, male, NA, stage:3, alive, 990 days	45.5
DO48728	0 years, female, NA, stage:2, alive, 150 days	45.5
DO50802	0 years, male, NA, stage:2, alive, 930 days	45.3
DO48751	0 years, male, NA, stage:2, dead, 480 days	45.1
DO45159	0 years, male, NA, stage:3, alive, 1470 days	44.3
DO48715	0 years, female, NA, stage:2, dead, 690 days	44.0
DO45189	0 years, female, NA, stage:2, alive, 1200 days	43.0
DO45109	0 years, male, NA, stage:2, alive, 1590 days	42.9
DO45191	0 years, female, NA, stage:2, alive, 1200 days	42.6
DO23512	0 years, male, NA, stage:1, alive, 1260 days	42.5
DO45207	0 years, male, NA, stage:1, alive, 1050 days	42.4
DO23518	0 years, male, NA, stage:2, alive, 1320 days	42.4
DO45227	0 years, female, NA, stage:2, alive, 1020 days	42.4
DO45135	0 years, male, NA, stage:1, alive, 1410 days	42.4
DO23541	0 years, male, NA, stage:2, alive, 930 days	42.0
DO45223	0 years, male, NA, stage:4, alive, 1020 days	42.0
DO45233	0 years, male, NA, stage:3, alive, 900 days	41.9
DO45257	0 years, male, NA, stage:3, alive, 810 days	41.8
DO45117	0 years, female, NA, stage:2, dead, 1110 days	41.6
DO45201	0 years, male, NA, stage:1, alive, 900 days	41.6
DO23542	0 years, male, NA, stage:3, alive, 960 days	41.3
DO23543	0 years, male, NA, stage:2, alive, 1020 days	41.1
DO45123	0 years, female, NA, stage:2, dead, 570 days	40.6
DO45183	0 years, female, NA, stage:2, dead, 570 days	40.5
DO23513	0 years, male, NA, stage:3, alive, 1200 days	40.3
DO50839	0 years, female, NA, stage:3, alive, 330 days	40.2
DO45125	0 years, male, NA, stage:3, alive, 1680 days	40.2
DO23509	0 years, male, NA, stage:3, dead, 780 days	40.0
DO23545	0 years, male, NA, stage:2, dead, 570 days	40.0
DO45099	0 years, male, NA, stage:3, alive, 1590 days	39.6
DO48761	0 years, male, NA, stage:2, alive, 870 days	39.6
DO45181	0 years, female, NA, stage:2, alive, 1200 days	39.6
DO23521	0 years, male, NA, stage:3, alive, 1110 days	39.2
DO50844	0 years, male, NA, stage:4, alive, 300 days	38.9
DO50804	0 years, male, NA, stage:2, alive, 720 days	38.7
DO45137	0 years, male, NA, stage:1, alive, 1320 days	38.5
DO23532	0 years, female, NA, stage:1, alive, 960 days	38.4
DO48672	0 years, male, NA, stage:2, alive, 450 days	38.2
DO45097	0 years, male, NA, stage:3, alive, 1620 days	38.0
DO50776	0 years, male, NA, stage:1, alive, 690 days	38.0
DO23527	0 years, male, NA, stage:1, alive, 1050 days	37.6
DO50822	0 years, male, NA, stage:2, alive, 510 days	37.6
DO227801	0 years, female, NA, stage:1, alive, 660 days	37.4
DO45177	0 years, female, NA, stage:3, alive, 1260 days	37.4
DO45237	0 years, male, NA, stage:2, alive, 900 days	37.3
DO23536	0 years, male, NA, stage:2, alive, 930 days	37.3
DO45094	0 years, male, NA, stage:3, alive, 1650 days	36.9
DO50774	0 years, female, NA, stage:2, alive, 720 days	36.5
DO23546	0 years, male, NA, stage:2, alive, 1050 days	36.0
DO45199	0 years, female, NA, stage:2, alive, 1350 days	35.5
DO50817	0 years, male, NA, stage:2, alive, 390 days	35.5
DO45101	0 years, male, NA, stage:2, alive, 1680 days	34.9
DO23514	0 years, male, NA, stage:2, alive, 1290 days	34.6
DO45133	0 years, male, NA, stage:3, dead, 660 days	34.0
DO23548	0 years, female, NA, stage:1, alive, 840 days	32.9
DO23517	0 years, male, NA, stage:2, alive, 1200 days	32.3
DO45215	0 years, male, NA, stage:2, alive, 1170 days	31.4
DO45173	0 years, male, NA, stage:3, alive, 1170 days	30.9
DO45197	0 years, male, NA, stage:2, alive, 1170 days	30.8
DO48693	0 years, male, NA, stage:2, alive, 900 days	30.3
DO48733	0 years, male, NA, stage:2, alive, 600 days	30.2
DO23544	0 years, male, NA, stage:2, alive, 960 days	30.1
DO48719	0 years, male, NA, stage:2, alive, 690 days	30.0
DO45091	0 years, male, NA, stage:2, dead, 1320 days	29.9
DO45265	0 years, male, NA, stage:3, alive, 1020 days	29.7
DO48760	0 years, female, NA, stage:2, alive, 690 days	29.7
DO48706	0 years, male, NA, stage:2, alive, 870 days	29.6
DO45203	0 years, female, NA, stage:2, alive, 1170 days	29.5
DO45169	0 years, male, NA, stage:3, alive, 1350 days	28.9
DO48677	0 years, male, NA, stage:3, alive, 1140 days	28.1
DO45187	0 years, female, NA, stage:1, alive, 1260 days	28.1
DO45111	0 years, male, NA, stage:2, alive, 1590 days	27.9
DO45096	0 years, male, NA, stage:2, dead, 1290 days	27.6
DO48725	0 years, male, NA, stage:1, alive, 780 days	25.5
DO23550	0 years, male, NA, stage:1, alive, 990 days	25.3
DO45167	0 years, male, NA, stage:2, dead, 1440 days	25.2
DO227643	0 years, male, NA, stage:2, alive, 1260 days	25.1
DO50807	0 years, male, NA, stage:1, alive, 540 days	24.8
DO50793	0 years, male, NA, stage:4, alive, 540 days	24.5
DO48674	0 years, male, NA, stage:2, alive, 1260 days	24.4
DO23551	0 years, male, NA, stage:3, dead, 150 days	24.2
DO50857	0 years, male, NA, stage:2, alive, 210 days	24.1
DO23531	0 years, female, NA, stage:3, alive, 900 days	23.4
DO45171	0 years, male, NA, stage:3, alive, 600 days	23.1
DO45247	0 years, female, NA, stage:2, alive, 210 days	22.9
DO48727	0 years, female, NA, stage:2, dead, 390 days	22.4
DO23538	0 years, male, NA, stage:2, alive, 450 days	21.2
DO23529	0 years, male, NA, stage:4, alive, 930 days	20.9
DO50859	0 years, male, NA, stage:2, alive, 180 days	20.7
DO50815	0 years, male, NA, stage:3, alive, 150 days	20.6
DO45195	0 years, male, NA, stage:1, alive, 390 days	20.5
DO23534	0 years, male, NA, stage:2, alive, 840 days	20.5
DO50845	0 years, male, NA, stage:3, alive, 210 days	20.4
DO45129	0 years, male, NA, stage:3, alive, 1470 days	20.3
DO45175	0 years, male, NA, stage:2, alive, 1140 days	17.8
DO45107	0 years, female, NA, stage:2, alive, 1710 days	16.5
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
965	Tumor	1.5
395	Tumor	1.3
957	Tumor	1.0
925	Tumor	1.0
311	Tumor	1.0
573	Tumor	0.9
697	Tumor	0.8
211	Tumor	0.8
525	Tumor	0.8
917	Tumor	0.8
963	Tumor	0.8
823	Tumor	0.7
981	Tumor	0.7
471	Tumor	0.6
355	Tumor	0.6
497	Tumor	0.6
491	Tumor	0.6
817	Tumor	0.6
483	Tumor	0.6
951	Tumor	0.6
1025	Tumor	0.5
361	Tumor	0.5
523	Tumor	0.5
953	Tumor	0.5
1021	Tumor	0.5
1027	Tumor	0.5
755	Tumor	0.4
331	Tumor	0.4
343	Tumor	0.4
545	Tumor	0.4
533	Tumor	0.4
863	Tumor	0.4
1015	Tumor	0.4
1031	Tumor	0.4
455	Tumor	0.4
147	Tumor	0.4
567	Tumor	0.4
861	Tumor	0.4
433	Tumor	0.4
445	Tumor	0.4
967	Tumor	0.3
271	Tumor	0.3
217	Tumor	0.3
727	Tumor	0.3
883	Tumor	0.3
923	Tumor	0.3
423	Tumor	0.3
493	Tumor	0.3
535	Tumor	0.3
877	Tumor	0.3
145	Tumor	0.3
477	Tumor	0.3
447	Tumor	0.3
413	Tumor	0.3
387	Tumor	0.3
375	Tumor	0.2
421	Tumor	0.2
777	Tumor	0.2
461	Tumor	0.2
983	Tumor	0.2
527	Tumor	0.2
415	Tumor	0.2
528	Normal	0.2
937	Tumor	0.2
297	Tumor	0.2
526	Normal	0.2
257	Tumor	0.2
966	Normal	0.2
498	Normal	0.2
492	Normal	0.2
1013	Tumor	0.2
268	Normal	0.2
524	Normal	0.2
231	Tumor	0.1
187	Tumor	0.1
515	Tumor	0.1
327	Tumor	0.1
487	Tumor	0.1
695	Tumor	0.1
554	Normal	0.1
467	Tumor	0.1
916	Normal	0.1
913	Tumor	0.1
671	Tumor	0.1
1041	Tumor	0.1
262	Normal	0.1
131	Tumor	0.1
218	Normal	0.1
258	Normal	0.1
191	Tumor	0.1
538	Normal	0.1
192	Normal	0.0
851	Tumor	0.0
943	Tumor	0.0
195	Tumor	0.0
267	Tumor	0.0
212	Normal	0.0
473	Tumor	0.0
434	Normal	0.0
353	Tumor	0.0
696	Normal	0.0
125	Tumor	0.0
647	Tumor	0.0
857	Tumor	0.0
516	Normal	0.0
494	Normal	0.0
272	Normal	-0.1
574	Normal	-0.1
546	Normal	-0.1
756	Normal	-0.1
478	Normal	-0.1
815	Tumor	-0.1
536	Normal	-0.1
724	Normal	-0.1
427	Tumor	-0.1
352	Normal	-0.1
283	Tumor	-0.1
463	Tumor	-0.1
537	Tumor	-0.1
474	Normal	-0.1
393	Tumor	-0.1
778	Normal	-0.1
553	Tumor	-0.1
223	Tumor	-0.1
213	Tumor	-0.1
824	Normal	-0.1
443	Tumor	-0.1
351	Tumor	-0.1
518	Normal	-0.1
232	Normal	-0.1
685	Tumor	-0.1
785	Tumor	-0.1
918	Normal	-0.1
465	Tumor	-0.1
224	Normal	-0.1
1026	Normal	-0.1
922	Normal	-0.1
277	Tumor	-0.1
514	Normal	-0.1
816	Normal	-0.1
391	Tumor	-0.1
484	Normal	-0.1
737	Tumor	-0.1
911	Tumor	-0.1
488	Normal	-0.1
365	Tumor	-0.1
228	Normal	-0.1
745	Tumor	-0.1
123	Tumor	-0.1
617	Tumor	-0.2
534	Normal	-0.2
713	Tumor	-0.2
956	Normal	-0.2
285	Tumor	-0.2
428	Normal	-0.2
557	Tumor	-0.2
852	Normal	-0.2
868	Normal	-0.2
924	Normal	-0.2
513	Tumor	-0.2
663	Tumor	-0.2
563	Tumor	-0.2
384	Normal	-0.2
261	Tumor	-0.2
411	Tumor	-0.2
926	Normal	-0.2
312	Normal	-0.2
363	Tumor	-0.2
412	Normal	-0.2
975	Tumor	-0.2
127	Tumor	-0.2
286	Normal	-0.2
481	Tumor	-0.2
388	Normal	-0.2
641	Tumor	-0.2
396	Normal	-0.2
978	Normal	-0.2
661	Tumor	-0.2
354	Normal	-0.2
416	Normal	-0.2
1016	Normal	-0.2
1042	Normal	-0.2
386	Normal	-0.2
422	Normal	-0.2
146	Normal	-0.2
137	Tumor	-0.2
357	Tumor	-0.2
517	Tumor	-0.2
968	Normal	-0.2
185	Tumor	-0.2
142	Normal	-0.3
332	Normal	-0.3
558	Normal	-0.3
358	Normal	-0.3
881	Tumor	-0.3
392	Normal	-0.3
1043	Tumor	-0.3
284	Normal	-0.3
721	Tumor	-0.3
138	Normal	-0.3
188	Normal	-0.3
1028	Normal	-0.3
113	Tumor	-0.3
571	Tumor	-0.3
952	Normal	-0.3
984	Normal	-0.3
977	Tumor	-0.3
728	Normal	-0.3
364	Normal	-0.3
328	Normal	-0.3
914	Normal	-0.3
112	Tumor	-0.3
278	Normal	-0.3
446	Normal	-0.3
627	Tumor	-0.3
858	Normal	-0.3
482	Normal	-0.3
394	Normal	-0.3
955	Tumor	-0.3
884	Normal	-0.3
344	Normal	-0.3
314	Normal	-0.3
714	Normal	-0.3
171	Tumor	-0.3
432	Normal	-0.3
464	Normal	-0.3
636	Normal	-0.3
964	Normal	-0.3
665	Tumor	-0.3
814	Normal	-0.3
186	Normal	-0.3
362	Normal	-0.3
132	Normal	-0.4
564	Normal	-0.4
867	Tumor	-0.4
466	Normal	-0.4
864	Normal	-0.4
221	Tumor	-0.4
786	Normal	-0.4
368	Normal	-0.4
615	Tumor	-0.4
741	Tumor	-0.4
367	Tumor	-0.4
1014	Normal	-0.4
227	Tumor	-0.4
424	Normal	-0.4
196	Normal	-0.4
642	Normal	-0.4
618	Normal	-0.4
982	Normal	-0.4
976	Normal	-0.4
628	Normal	-0.4
356	Normal	-0.4
664	Normal	-0.4
1032	Normal	-0.4
313	Tumor	-0.4
723	Tumor	-0.4
414	Normal	-0.4
616	Normal	-0.4
648	Normal	-0.4
938	Normal	-0.4
662	Normal	-0.4
915	Tumor	-0.4
444	Normal	-0.4
698	Normal	-0.4
722	Normal	-0.4
148	Normal	-0.5
954	Normal	-0.5
746	Normal	-0.5
172	Normal	-0.5
136	Normal	-0.5
716	Normal	-0.5
744	Normal	-0.5
738	Normal	-0.5
468	Normal	-0.5
451	Tumor	-0.5
298	Normal	-0.5
162	Normal	-0.5
385	Tumor	-0.5
1045	Tumor	-0.5
874	Normal	-0.5
743	Tumor	-0.5
686	Normal	-0.5
456	Normal	-0.5
214	Normal	-0.5
921	Tumor	-0.5
572	Normal	-0.5
425	Tumor	-0.5
818	Normal	-0.5
1044	Normal	-0.5
124	Normal	-0.5
568	Normal	-0.5
666	Normal	-0.5
435	Tumor	-0.5
944	Normal	-0.5
472	Normal	-0.6
126	Normal	-0.6
1022	Normal	-0.6
376	Normal	-0.6
742	Normal	-0.6
111	Normal	-0.6
878	Normal	-0.6
813	Tumor	-0.6
436	Normal	-0.6
866	Normal	-0.6
161	Tumor	-0.6
715	Tumor	-0.6
114	Normal	-0.6
865	Tumor	-0.6
882	Normal	-0.6
383	Tumor	-0.7
222	Normal	-0.7
341	Tumor	-0.7
431	Tumor	-0.7
862	Normal	-0.7
135	Tumor	-0.7
141	Tumor	-0.7
366	Normal	-0.7
958	Normal	-0.8
1046	Normal	-0.8
342	Normal	-0.8
448	Normal	-0.8
873	Tumor	-0.8
128	Normal	-0.8
426	Normal	-0.8
912	Normal	-0.9
452	Normal	-0.9
462	Normal	-1.0
635	Tumor	-1.1
672	Normal	-1.6
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA014742
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS