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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MED31 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
25.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
15.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
13.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
11.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
5.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
5.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
4.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
4.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
4.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
3.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
1.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
1.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MED31 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
65.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
39.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
25.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
24.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
23.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
23.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
22.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
22.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
21.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
20.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
20.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
18.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
18.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
18.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
17.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
17.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
17.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
17.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
17.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
16.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
16.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
16.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
16.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
14.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
14.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
14.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
14.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
14.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
14.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
14.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
14.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
13.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
13.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
13.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
13.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
13.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
13.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
13.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
13.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
13.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
12.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
12.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
12.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
12.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
12.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
12.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
12.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
12.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
12.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
12.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
12.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
12.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
12.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
12.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
12.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
12.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
11.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
11.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
11.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
11.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
11.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
11.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
11.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
11.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
11.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
11.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
11.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
11.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
11.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
11.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
11.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
11.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
11.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
11.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
11.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
10.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
10.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
10.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
10.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
10.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
10.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
10.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
10.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
10.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
10.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
10.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
9.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
9.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
9.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
9.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
9.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
9.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
9.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
9.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
9.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
9.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
9.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
9.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
9.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
9.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
9.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
9.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
9.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
8.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
8.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
8.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
8.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
8.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
8.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
8.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
8.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
8.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
8.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
8.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
8.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
8.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
8.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
8.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
7.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
7.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
7.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
7.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
7.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
7.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
7.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
7.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
7.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
7.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
6.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
6.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
6.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
6.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MED31 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
20.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
18.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
17.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
16.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
16.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
16.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
15.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
14.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
14.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
14.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
13.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
13.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
12.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
12.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
12.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
11.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
11.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
11.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
10.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
10.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
10.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
10.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
10.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
10.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
9.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
9.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
8.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
8.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
8.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
8.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
7.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
7.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
6.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
6.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
6.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
5.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MED31 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
51.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
39.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
35.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
34.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
31.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
29.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
29.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
28.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
28.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
27.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
27.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
27.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
27.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
25.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
25.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
25.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
22.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
22.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
21.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
21.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
20.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
20.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
20.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
19.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
19.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
19.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
18.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
18.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
18.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
18.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
18.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
17.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
17.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
16.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
16.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
15.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
15.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
15.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
15.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
14.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
14.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
14.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
14.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
13.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
13.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
13.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
13.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
13.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
12.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
12.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
12.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
12.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
12.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
12.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
11.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
11.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
11.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
11.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
10.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
10.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
10.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
10.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
10.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
10.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
10.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
9.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
9.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
9.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
9.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
8.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
8.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
8.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
8.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
8.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
8.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
7.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
7.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
7.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
7.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
6.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
6.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
6.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
6.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
6.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
6.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
5.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
5.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
4.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
2.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
1.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0010120001
Normal
1.1
CPT0012900004
Tumor
0.8
CPT0001260009
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0021240003
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0077320001
Normal
0.5
CPT0001270001
Normal
0.4
CPT0000870016
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0086820003
Tumor
0.3
CPT0066520001
Normal
0.3
CPT0081990003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0065750003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0065450001
Normal
0.3
CPT0084560003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0085670003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0018250001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0088550004
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0069010001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0079510001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0086830003
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0026410003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0065430003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0063640001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0087040003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0014160003
Tumor
-0.4
CPT0017450001
Normal
-0.4
CPT0002270011
Tumor
-0.4
CPT0000890001
Normal
-0.4
CPT0012920003
Normal
-0.5
CPT0089020003
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0001500009
Tumor
-0.5
CPT0009020003
Normal
-0.5
CPT0006900003
Tumor
-0.6
CPT0009080003
Normal
-0.8
CPT0092290003
Tumor
-0.8
CPT0078510003
Tumor
-1.6
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0064370003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0078940001
Normal
N/A
CPT0092190003
Normal
N/A
CPT0012570003
Normal
N/A
CPT0088640003
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0024680001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0089480003
Normal
N/A
CPT0064400001
Normal
N/A
CPT0012550003
Tumor
N/A
CPT0089460004
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0013790003
Normal
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
