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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GBF1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
198.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
136.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
134.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
120.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
119.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
102.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
86.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
75.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
73.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
69.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
69.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
58.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
54.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
52.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
51.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
48.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
46.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
45.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
44.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
39.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
39.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
32.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
27.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
27.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
27.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
26.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
26.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
20.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
19.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
19.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
16.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
16.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
16.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
16.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
15.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
15.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
14.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
14.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
14.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
13.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
13.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
13.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
12.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
11.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GBF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
82.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
76.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
55.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
47.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
46.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
42.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
42.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
40.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
38.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
37.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
36.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
35.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
34.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
33.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
33.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
33.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
33.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
32.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
32.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
31.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
31.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
31.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
30.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
30.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
30.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
29.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
29.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
29.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
28.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
28.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
28.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
28.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
28.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
27.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
27.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
27.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
27.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
27.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
27.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
27.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
26.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
26.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
26.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
26.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
26.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
26.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
26.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
26.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
26.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
25.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
25.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
25.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
25.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
25.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
24.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
24.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
24.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
24.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
24.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
24.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
24.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
24.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
24.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
24.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
24.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
24.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
24.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
24.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
24.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
24.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
24.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
23.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
23.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
23.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
23.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
23.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
23.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
23.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
23.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
23.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
22.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
22.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
22.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
22.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
22.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
22.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
22.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
22.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
22.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
22.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
22.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
22.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
21.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
21.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
21.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
21.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
21.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
21.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
21.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
21.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
21.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
21.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
21.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
21.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
21.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
21.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
21.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
20.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
20.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
20.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
20.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
20.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
20.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
20.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
20.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
20.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
20.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
20.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
20.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
20.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
20.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
20.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
19.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
19.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
19.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
19.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
19.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
19.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
19.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
19.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
19.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
19.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
19.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
19.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
19.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
18.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
18.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
18.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
18.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
18.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
18.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
18.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
18.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
18.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
17.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
17.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
17.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
17.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
17.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
17.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
17.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
17.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
17.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
17.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
17.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
17.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
17.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
16.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
16.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
16.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
16.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
16.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
16.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
15.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
15.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
15.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
15.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
14.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
14.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
14.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
14.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
14.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
14.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
13.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
13.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
13.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
12.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
12.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
10.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
10.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
9.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
8.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GBF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
41.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
31.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
29.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
28.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
26.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
25.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
24.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
23.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
23.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
22.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
22.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
21.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
21.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
21.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
20.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
19.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
18.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
18.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
18.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
16.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
15.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
15.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
13.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
13.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
11.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
10.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
8.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
8.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GBF1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
370.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
220.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
168.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
156.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
150.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
143.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
140.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
138.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
138.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
132.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
130.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
122.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
122.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
119.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
119.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
113.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
108.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
108.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
108.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
107.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
106.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
105.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
103.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
102.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
101.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
94.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
90.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
85.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
84.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
84.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
81.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
78.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
78.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
78.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
77.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
76.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
75.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
69.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
67.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
67.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
67.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
66.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
66.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
65.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
65.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
64.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
60.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
60.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
58.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
58.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
57.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
56.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
56.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
56.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
56.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
56.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
55.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
54.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
54.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
53.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
53.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
52.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
52.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
52.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
52.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
51.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
50.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
48.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
47.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
45.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
45.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
44.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
44.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
44.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
43.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
42.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
42.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
42.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
42.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
42.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
41.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
41.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
41.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
41.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
41.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
40.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
40.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
39.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
39.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
39.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
39.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
38.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
38.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
38.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
38.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
37.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
37.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
37.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
37.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
37.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
36.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
36.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
36.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
36.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
35.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
34.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
34.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
34.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
34.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
34.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
33.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
33.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
33.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
33.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
33.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
33.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
33.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
33.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
32.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
32.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
32.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
32.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
32.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
32.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
32.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
32.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
31.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
31.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
31.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
31.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
31.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
31.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
31.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
30.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
30.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
30.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
29.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
29.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
29.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
29.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
29.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
29.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
29.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
29.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
29.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
29.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
29.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
28.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
28.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
28.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
28.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
28.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
28.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
28.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
28.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
28.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
28.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
28.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
28.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
28.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
28.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
27.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
27.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
27.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
27.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
27.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
26.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
26.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
26.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
26.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
26.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
26.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
26.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
26.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
26.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
25.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
25.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
25.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
25.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
25.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
25.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
24.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
24.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
24.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
24.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
24.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
24.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
23.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
23.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
23.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
23.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
22.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
22.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
22.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
21.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
21.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
21.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
20.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
20.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
20.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
20.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
19.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
19.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
19.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
18.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
18.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
18.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
18.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
18.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
17.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
17.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
16.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
14.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
0.9
CPT0012280003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0001340003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0001180009
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0012550003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0078510003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0002270011
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0012640003
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0009020003
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0012090003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0079300001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0079430001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0087050003
Normal
0.0
CPT0002370001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0086370003
Normal
0.0
CPT0066520001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0079000001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0000640003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0078830003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
