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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LZTS2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
102.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
65.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
62.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
58.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
55.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
53.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
47.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
47.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
46.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
44.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
40.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
38.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
38.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
37.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
37.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
34.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
32.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
31.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
31.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
29.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
29.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
27.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
27.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
26.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
26.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
25.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
25.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
25.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
24.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
24.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
24.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
23.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
23.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
22.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
22.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
22.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
22.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
21.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
21.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
21.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
20.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
19.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
18.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
17.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
17.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
17.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
17.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
17.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
16.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
16.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
15.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
14.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
13.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
12.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LZTS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
76.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
68.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
59.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
58.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
56.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
54.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
54.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
54.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
51.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
51.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
50.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
50.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
49.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
49.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
49.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
48.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
48.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
48.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
48.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
47.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
47.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
47.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
46.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
46.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
46.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
46.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
45.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
45.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
45.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
44.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
44.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
44.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
44.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
44.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
43.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
43.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
43.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
43.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
43.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
43.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
42.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
42.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
42.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
42.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
42.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
41.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
41.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
41.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
41.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
41.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
41.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
40.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
40.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
40.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
40.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
40.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
40.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
40.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
40.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
39.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
39.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
39.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
39.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
39.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
39.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
38.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
38.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
38.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
38.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
38.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
38.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
38.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
38.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
38.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
37.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
37.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
37.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
37.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
37.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
37.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
37.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
36.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
36.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
36.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
36.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
36.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
36.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
36.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
36.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
36.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
36.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
36.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
36.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
35.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
35.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
35.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
35.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
35.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
35.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
35.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
35.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
35.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
35.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
35.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
34.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
34.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
34.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
34.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
34.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
34.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
34.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
34.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
34.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
34.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
34.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
34.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
34.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
34.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
34.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
34.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
33.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
33.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
33.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
33.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
33.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
33.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
33.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
33.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
33.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
33.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
33.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
33.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
33.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
32.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
32.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
32.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
32.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
32.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
32.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
32.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
32.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
32.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
32.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
32.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
32.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
31.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
31.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
31.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
31.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
31.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
31.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
31.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
31.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
31.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
31.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
31.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
31.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
31.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
31.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
31.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
30.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
30.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
30.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
30.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
30.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
30.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
30.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
30.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
30.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
30.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
30.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
30.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
30.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
30.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
30.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
29.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
29.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
29.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
29.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
29.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
29.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
29.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
29.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
29.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
29.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
29.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
29.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
29.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
29.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
29.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
29.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
29.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
29.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
29.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
28.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
28.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
28.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
28.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
28.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
28.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
28.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
28.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
28.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
28.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
28.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
28.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
28.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
28.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
28.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
28.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
28.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
28.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
27.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
27.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
27.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
27.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
27.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
27.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
27.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
27.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
27.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
27.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
27.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
27.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
27.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
27.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
27.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
26.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
26.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
26.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
26.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
26.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
26.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
26.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
26.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
26.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
26.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
26.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
26.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
26.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
26.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
26.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
26.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
26.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
26.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
25.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
25.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
25.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
25.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
25.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
25.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
25.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
25.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
25.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
25.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
25.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
25.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
25.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
25.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
25.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
25.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
25.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
25.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
25.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
25.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
25.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
24.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
24.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
24.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
24.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
24.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
24.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
24.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
24.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
24.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
24.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
23.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
23.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
23.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
23.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
23.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
23.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
23.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
23.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
23.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
23.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
23.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
23.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
23.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
23.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
23.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
23.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
23.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
23.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
22.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
22.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
22.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
22.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
22.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
22.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
22.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
22.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
22.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
22.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
22.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
22.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
22.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
22.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
21.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
21.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
21.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
21.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
21.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
21.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
21.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
21.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
21.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
21.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
21.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
21.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
20.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
20.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
20.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
20.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
20.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
20.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
20.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
20.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
20.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
20.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
19.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
19.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
19.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
19.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
19.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
19.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
18.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
18.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
18.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
18.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
18.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
18.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
17.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
16.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
13.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
12.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
11.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LZTS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
77.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
75.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
75.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
69.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
64.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
63.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
61.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
57.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
54.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
54.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
52.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
52.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
52.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
50.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
50.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
49.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
49.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
47.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
47.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
46.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
44.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
44.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
44.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
44.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
43.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
43.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
43.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
42.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
42.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
42.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
42.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
42.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
42.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
41.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
41.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
41.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
41.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
41.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
40.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
40.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
40.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
40.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
40.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
40.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
39.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
38.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
38.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
37.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
36.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
35.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
35.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
35.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
34.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
34.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
34.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
34.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
33.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
33.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
33.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
32.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
32.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
31.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
31.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
31.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
31.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
31.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
31.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
30.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
30.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
29.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
29.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
29.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
28.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
28.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
27.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
27.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
27.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
25.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
25.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
25.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
25.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
19.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
18.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
18.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
17.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
16.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LZTS2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
125.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
113.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
112.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
109.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
107.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
107.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
106.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
103.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
97.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
89.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
88.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
87.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
84.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
84.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
83.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
82.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
79.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
78.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
78.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
77.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
77.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
73.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
73.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
72.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
71.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
70.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
70.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
70.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
69.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
69.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
68.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
68.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
67.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
66.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
65.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
64.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
64.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
64.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
64.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
63.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
63.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
63.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
63.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
63.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
63.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
63.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
62.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
62.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
62.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
62.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
61.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
61.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
61.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
61.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
61.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
61.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
60.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
60.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
60.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
59.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
59.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
59.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
59.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
59.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
59.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
59.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
58.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
58.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
58.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
57.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
57.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
57.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
56.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
56.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
55.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
54.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
54.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
53.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
53.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
53.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
53.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
53.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
52.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
52.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
52.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
52.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
52.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
51.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
50.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
50.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
50.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
50.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
49.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
49.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
49.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
49.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
49.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
49.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
49.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
49.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
49.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
49.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
49.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
49.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
48.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
48.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
48.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
48.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
48.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
48.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
48.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
48.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
48.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
48.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
48.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
47.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
47.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
47.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
47.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
47.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
47.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
47.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
46.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
46.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
46.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
46.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
46.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
46.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
46.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
46.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
45.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
45.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
45.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
45.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
45.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
45.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
44.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
44.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
44.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
44.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
44.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
44.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
43.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
43.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
43.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
43.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
43.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
43.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
43.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
43.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
42.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
42.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
42.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
42.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
42.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
42.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
42.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
42.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
41.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
41.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
41.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
41.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
40.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
40.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
40.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
40.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
40.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
40.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
39.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
39.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
39.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
39.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
39.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
39.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
39.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
39.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
39.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
39.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
39.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
38.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
38.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
38.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
38.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
38.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
38.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
38.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
38.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
38.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
37.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
37.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
37.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
37.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
37.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
37.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
37.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
37.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
37.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
37.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
37.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
37.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
36.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
36.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
36.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
36.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
36.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
36.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
36.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
35.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
35.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
35.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
34.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
34.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
34.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
34.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
34.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
34.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
34.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
34.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
33.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
33.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
33.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
33.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
33.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
33.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
33.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
33.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
33.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
32.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
32.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
32.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
31.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
31.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
31.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
31.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
31.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
31.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
30.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
30.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
30.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
29.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
29.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
29.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
29.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
28.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
28.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
28.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
28.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
27.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
27.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
27.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
27.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
27.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
26.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
26.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
25.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
25.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
25.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
25.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
24.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
24.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
24.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
24.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
21.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
21.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
20.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
19.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
19.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
17.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
17.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
15.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0000780007
Tumor
0.6
CPT0088900003
Tumor
0.6
CPT0019130003
Tumor
0.6
CPT0000870016
Tumor
0.6
CPT0002270011
Tumor
0.6
CPT0089460004
Tumor
0.6
CPT0012900004
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0006630003
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0077310003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0075720003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0017410003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0009060003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0001180009
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0079000001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0069190001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0014350001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0064400001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0078660003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0088690003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0086030003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0088480003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0075130003
Tumor
-0.3
CPT0088780001
Normal
-0.3
CPT0081880003
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0078510003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0024670003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0069160003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
