HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:84.8 nTPM
HPA Brain:276.1 nTPM
GTEx:84.8 nTPM
FANTOM5:270.5 Scaled Tags Per Million
Pig:243.7 nTPM
Mouse:268.3 nTPM
Allen mouse:15.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044605
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 276.1
Sample id Sample description nTPM
Hippocampus
nTPM: 245.7
2148 Female, age 91, left hemisphere 283.7
1898 Male, age 80, left hemisphere 274.3
2529 Female, age 94, left hemisphere 262.1
2621 Female, age 67, right hemisphere 251.7
1855 Male, age 76, left hemisphere 210.5
1911 Female, age 85, right hemisphere 192.1
Dentate gyrus
nTPM: 252.3
2530 Female, age 94, left hemisphere 287.8
1927 Female, age 91, both hemispheres 282.3
2528 Male, age 74, both hemispheres 253.4
2531 Female, age 67, both hemispheres 251.2
2246 Female, age 85, both hemispheres 244.4
2010 Male, age 76, both hemispheres 194.5
Entorhinal gyrus
nTPM: 276.1
2613 Female, age 94, left hemisphere 323.0
1938 Female, age 85, left hemisphere 290.1
1787 Male, age 76, left hemisphere 278.9
2764 Male, age 80, right hemisphere 268.4
2686 Male, age 75, right hemisphere 260.9
2117 Female, age 91, right hemisphere 235.1
Hippocampus, CA1
nTPM: 244.6
2082 Female, age 91, right hemisphere 279.0
2749 Male, age 80, left hemisphere 249.2
1873 Female, age 85, both hemispheres 241.3
2527 Male, age 74, both hemispheres 240.7
2045 Male, age 76, both hemispheres 212.6
Hippocampus, CA2
nTPM: 230.9
1892 Male, age 76, both hemispheres 267.5
2437 Female, age 94, left hemisphere 264.2
1963 Male, age 80, left hemisphere 245.3
2113 Female, age 91, right hemisphere 238.9
1940 Female, age 85, left hemisphere 187.5
2249 Male, age 74, both hemispheres 182.5
Hippocampus, CA3
nTPM: 250.3
2861 Female, age 67, both hemispheres 361.9
2620 Female, age 94, left hemisphere 299.0
1867 Male, age 76, both hemispheres 255.5
2137 Male, age 80, left hemisphere 210.0
1891 Female, age 85, both hemispheres 203.7
2436 Male, age 74, both hemispheres 171.9
Parahippocampal cortex
nTPM: 247.8
1990 Female, age 91, right hemisphere 283.4
2692 Male, age 74, both hemispheres 281.0
2622 Female, age 67, right hemisphere 273.0
1933 Female, age 85, both hemispheres 264.1
1850 Male, age 80, both hemispheres 254.1
2245 Female, age 91, both hemispheres 247.0
2250 Female, age 67, right hemisphere 238.2
2693 Female, age 94, both hemispheres 233.0
2532 Female, age 72, left hemisphere 213.5
2018 Male, age 76, both hemispheres 191.0
Perirhinal gyrus
nTPM: 258.2
1847 Female, age 91, left hemisphere 352.9
1794 Male, age 80, right hemisphere 270.7
2521 Female, age 94, right hemisphere 234.4
1841 Female, age 85, right hemisphere 223.4
2848 Male, age 76, right hemisphere 209.4
Subiculum
nTPM: 227.8
2619 Male, age 74, both hemispheres 284.9
1977 Female, age 85, both hemispheres 261.1
2438 Female, age 94, left hemisphere 243.1
2729 Female, age 91, right hemisphere 243.1
1901 Male, age 80, both hemispheres 195.2
2042 Male, age 76, both hemispheres 139.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 84.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 84.8
Samples: 197

Max nTPM: 171.8
Min nTPM: 19.0
Std nTPM: 30.2
Median nTPM: 83.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 171.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 167.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 155.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 146.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 141.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 139.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 136.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 136.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 134.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 133.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 132.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 270.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 270.5
FF:10169-103B7 60 years, female 340.6
FF:10153-102I9 76 years, female 200.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 243.7
Pig sample Sample description nTPM
Subiculum
nTPM: 237.2
Samples: 4

Max nTPM: 276.4
Min nTPM: 203.3
Sample A Female 276.4
Sample B Female 203.3
Sample C Male 263.6
Sample D Male 205.6
Dorsal hippocampus
nTPM: 179.7
Samples: 4

Max nTPM: 216.0
Min nTPM: 122.8
Sample A Female 216.0
Sample B Female 209.0
Sample C Male 171.1
Sample D Male 122.8
Entorhinal cortex
nTPM: 201.8
Samples: 4

Max nTPM: 237.5
Min nTPM: 175.6
Sample A Female 237.5
Sample B Female 183.0
Sample C Male 210.9
Sample D Male 175.6
Ventral hippocampus
nTPM: 243.7
Samples: 4

Max nTPM: 354.1
Min nTPM: 168.4
Sample A Female 280.9
Sample B Female 171.3
Sample C Male 354.1
Sample D Male 168.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 268.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 268.3
Samples: 4

Max nTPM: 351.6
Min nTPM: 233.5
Sample A Male 234.7
Sample B Male 233.5
Sample C Female 253.5
Sample D Female 351.6
Hippocampal formation
nTPM: 228.9
Samples: 4

Max nTPM: 250.6
Min nTPM: 201.1
Sample A Male 201.1
Sample B Male 240.8
Sample C Female 250.6
Sample D Female 222.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.5
69262230 Antisense, RP_050301_01_F10, Mouse strain C57BL/6J (56 days, male) 22.8
70812774 Antisense, RP_050712_02_E12, Mouse strain C57BL/6J (56 days, male) 8.1

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