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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BAG1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
231.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
551.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
544.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
436.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
372.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
366.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
364.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
340.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
337.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
335.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
329.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
321.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
320.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
309.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
303.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
298.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
293.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
284.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
278.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
270.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
264.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
263.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
261.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
253.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
252.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
250.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
247.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
246.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
233.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
232.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
230.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
229.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
224.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
224.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
223.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
222.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
215.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
214.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
211.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
205.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
202.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
196.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
186.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
185.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
184.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
182.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
172.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
168.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
162.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
157.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
155.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
153.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
146.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
143.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
141.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
128.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
123.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
121.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
119.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
115.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
98.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
95.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
60.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
41.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BAG1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
59.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
318.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
271.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
225.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
224.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
195.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
188.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
181.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
174.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
172.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
167.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
154.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
145.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
144.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
133.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
133.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
124.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
122.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
122.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
120.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
120.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
116.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
116.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
116.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
116.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
114.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
111.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
109.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
107.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
107.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
104.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
103.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
103.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
103.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
102.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
101.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
97.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
95.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
95.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
94.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
93.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
93.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
93.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
92.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
90.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
90.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
89.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
88.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
88.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
87.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
87.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
87.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
87.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
87.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
87.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
87.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
87.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
85.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
85.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
85.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
85.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
85.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
85.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
84.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
84.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
84.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
84.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
83.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
83.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
83.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
83.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
83.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
82.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
82.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
82.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
81.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
81.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
81.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
81.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
80.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
80.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
80.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
80.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
80.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
80.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
79.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
79.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
78.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
78.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
78.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
78.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
78.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
78.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
77.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
77.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
77.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
77.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
77.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
76.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
76.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
76.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
76.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
75.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
75.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
75.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
75.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
75.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
75.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
75.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
74.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
74.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
74.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
74.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
74.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
74.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
74.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
74.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
74.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
74.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
74.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
74.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
73.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
73.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
73.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
73.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
73.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
73.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
72.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
72.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
72.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
72.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
72.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
71.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
71.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
71.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
71.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
71.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
71.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
71.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
71.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
71.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
71.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
70.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
70.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
70.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
70.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
70.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
70.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
70.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
69.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
69.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
69.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
69.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
68.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
68.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
68.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
68.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
68.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
68.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
68.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
68.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
68.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
68.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
68.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
68.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
68.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
67.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
67.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
67.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
67.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
67.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
67.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
67.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
67.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
67.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
66.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
66.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
66.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
66.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
66.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
66.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
66.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
66.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
66.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
65.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
65.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
65.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
65.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
65.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
65.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
65.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
65.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
65.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
64.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
64.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
64.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
64.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
64.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
64.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
64.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
64.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
64.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
63.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
63.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
63.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
63.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
63.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
63.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
63.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
63.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
63.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
63.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
63.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
63.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
63.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
63.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
62.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
62.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
62.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
62.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
62.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
62.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
61.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
61.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
61.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
61.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
61.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
61.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
61.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
61.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
60.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
60.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
60.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
60.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
60.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
60.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
60.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
59.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
59.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
59.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
59.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
59.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
58.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
58.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
58.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
58.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
58.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
58.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
57.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
57.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
57.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
57.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
57.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
56.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
56.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
56.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
56.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
56.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
56.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
56.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
56.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
56.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
56.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
56.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
55.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
55.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
55.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
55.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
55.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
54.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
54.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
54.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
54.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
54.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
54.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
54.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
53.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
53.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
53.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
53.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
53.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
52.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
52.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
52.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
52.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
52.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
52.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
52.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
52.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
52.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
51.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
51.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
51.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
51.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
51.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
51.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
51.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
50.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
50.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
50.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
50.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
50.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
50.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
50.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
50.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
50.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
50.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
50.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
50.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
49.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
49.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
49.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
49.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
49.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
49.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
48.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
48.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
48.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
48.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
48.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
48.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
48.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
48.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
48.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
48.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
48.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
47.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
47.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
47.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
47.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
47.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
47.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
46.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
46.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
46.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
46.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
46.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
46.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
46.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
46.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
46.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
46.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
46.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
46.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
46.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
46.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
46.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
46.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
45.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
45.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
45.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
45.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
45.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
45.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
45.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
45.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
44.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
44.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
44.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
44.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
44.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
44.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
44.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
44.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
43.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
43.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
43.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
43.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
43.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
43.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
43.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
43.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
43.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
43.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
42.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
42.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
42.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
42.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
42.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
42.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
41.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
41.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
41.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
41.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
41.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
41.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
41.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
41.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
41.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
41.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
40.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
40.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
40.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
40.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
40.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
39.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
39.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
39.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
39.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
39.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
39.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
39.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
38.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
38.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
38.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
38.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
38.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
38.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
38.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
38.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
37.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
37.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
37.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
37.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
37.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
37.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
37.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
36.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
36.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
36.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
36.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
35.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
35.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
35.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
35.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
35.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
34.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
34.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
34.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
34.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
34.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
34.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
34.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
33.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
33.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
33.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
32.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
32.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
32.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
32.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
32.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
31.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
31.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
31.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
31.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
31.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
31.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
30.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
30.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
30.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
30.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
30.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
30.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
29.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
29.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
29.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
29.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
29.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
29.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
28.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
28.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
28.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
28.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
27.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
27.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
27.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
27.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
26.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
26.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
25.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
25.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
25.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
25.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
24.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
24.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
24.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
24.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
24.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
24.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
23.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
23.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
22.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
22.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
22.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
22.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
21.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
21.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
21.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
21.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
20.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
19.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
18.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
17.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
15.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
14.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BAG1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
142.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
110.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
102.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
100.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
94.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
93.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
91.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
86.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
86.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
86.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
85.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
83.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
83.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
83.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
82.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
82.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
80.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
80.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
78.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
78.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
77.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
77.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
77.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
76.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
76.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
75.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
75.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
74.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
74.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
74.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
73.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
72.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
72.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
71.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
70.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
70.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
70.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
68.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
66.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
66.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
64.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
64.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
64.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
64.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
64.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
64.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
63.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
63.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
63.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
61.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
61.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
60.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
60.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
60.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
60.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
60.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
58.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
58.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
58.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
56.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
55.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
53.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
49.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
49.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
49.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
48.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
46.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
46.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
46.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
45.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
44.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
44.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
43.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
42.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
41.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
40.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
40.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
39.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
37.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
34.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
34.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
34.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
33.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
32.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
31.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
29.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
26.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
21.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
19.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
19.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BAG1 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
94.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
648.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
499.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
359.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
288.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
241.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
241.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
211.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
204.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
201.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
193.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
192.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
191.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
190.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
189.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
187.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
186.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
185.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
182.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
181.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
166.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
166.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
165.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
161.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
156.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
156.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
154.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
154.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
150.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
145.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
144.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
144.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
143.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
140.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
140.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
140.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
139.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
139.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
139.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
138.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
138.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
137.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
135.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
135.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
134.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
133.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
131.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
131.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
131.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
130.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
129.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
128.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
127.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
126.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
126.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
125.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
123.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
123.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
123.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
123.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
122.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
122.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
121.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
119.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
118.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
117.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
117.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
117.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
116.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
116.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
116.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
115.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
115.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
115.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
114.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
113.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
111.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
110.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
109.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
109.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
109.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
108.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
108.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
107.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
106.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
106.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
106.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
105.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
104.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
104.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
104.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
104.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
103.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
103.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
103.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
102.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
101.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
101.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
100.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
100.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
100.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
98.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
97.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
96.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
96.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
95.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
94.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
94.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
93.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
93.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
93.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
92.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
92.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
91.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
91.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
90.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
89.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
89.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
89.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
89.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
88.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
88.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
88.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
88.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
87.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
87.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
85.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
85.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
85.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
84.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
84.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
83.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
83.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
82.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
82.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
82.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
82.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
81.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
81.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
81.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
80.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
80.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
80.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
79.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
79.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
78.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
78.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
77.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
77.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
77.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
77.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
77.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
76.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
76.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
76.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
75.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
75.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
75.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
75.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
75.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
74.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
74.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
74.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
73.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
73.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
73.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
72.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
72.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
72.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
72.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
72.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
72.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
72.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
71.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
71.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
71.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
71.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
70.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
70.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
70.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
70.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
70.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
69.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
68.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
68.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
68.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
68.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
67.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
67.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
67.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
67.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
66.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
66.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
66.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
66.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
65.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
64.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
64.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
64.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
63.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
63.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
63.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
62.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
61.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
61.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
61.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
61.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
61.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
61.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
60.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
60.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
60.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
60.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
59.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
59.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
58.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
58.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
57.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
57.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
57.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
56.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
56.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
56.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
55.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
55.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
55.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
55.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
54.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
54.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
54.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
53.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
53.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
53.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
52.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
52.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
51.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
50.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
50.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
50.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
49.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
49.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
49.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
49.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
49.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
48.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
47.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
47.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
46.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
46.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
46.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
45.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
43.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
43.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
43.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
42.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
42.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
42.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
41.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
41.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
37.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
36.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
35.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
35.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
35.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
35.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
35.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
33.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
32.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
32.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
32.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
31.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
30.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
30.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
28.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
27.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
25.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
25.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
25.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
18.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
11.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.9
CPT0078660003
Tumor
1.2
CPT0088970003
Tumor
1.1
CPT0079510001
Normal
0.8
CPT0009020003
Normal
0.6
CPT0012640003
Normal
0.6
CPT0012770003
Normal
0.5
CPT0079300001
Normal
0.5
CPT0012920003
Normal
0.5
CPT0012570003
Normal
0.4
CPT0025610001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0006950001
Normal
0.4
CPT0009060003
Tumor
0.4
CPT0001230001
Normal
0.4
CPT0009080003
Normal
0.4
CPT0088640003
Normal
0.4
CPT0020130001
Normal
0.4
CPT0086890003
Normal
0.3
CPT0007870001
Normal
0.3
CPT0069190001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0071150004
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0088550004
Tumor
0.3
CPT0089480003
Normal
0.3
CPT0020020001
Normal
0.3
CPT0063330001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0076350001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0018250001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0078940001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0001510001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0006440003
Tumor
0.3
CPT0088500001
Normal
0.3
CPT0000660001
Normal
0.3
CPT0025920001
Normal
0.2
CPT0010120001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0001550001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0012090003
Normal
0.2
CPT0014470001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0079430001
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0092290003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0014370004
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0069000003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0007860003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0025350003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0078800003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0019130003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0025290003
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0065690003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0012180003
Tumor
-0.5
CPT0001260009
Tumor
-0.5
CPT0002350011
Tumor
-0.5
CPT0025230003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0024670003
Tumor
-0.6
CPT0014450004
Tumor
-0.6
CPT0025050003
Tumor
-0.6
CPT0086820003
Tumor
-0.6
CPT0001340003
Tumor
-0.7
CPT0012280003
Tumor
-0.7
CPT0012550003
Tumor
-0.7
CPT0069160003
Tumor
-0.7
CPT0086950003
Tumor
-0.7
CPT0025880003
Tumor
-0.7
CPT0081880003
Tumor
-0.8
CPT0023350003
Tumor
-0.9
CPT0001180009
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.