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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPIN1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
54.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
52.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
51.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
48.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
46.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
45.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
43.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
42.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
41.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
40.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
37.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
37.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
36.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
35.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
34.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
34.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
33.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
33.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
32.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
32.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
31.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
30.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
30.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
29.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
29.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
28.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
26.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
25.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
24.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
24.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
24.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
23.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
23.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
23.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
21.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
21.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
20.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
19.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
19.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
19.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
18.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
15.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
14.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
14.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
13.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
13.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
10.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPIN1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
74.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
64.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
60.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
59.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
59.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
59.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
58.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
57.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
57.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
56.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
56.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
56.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
56.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
55.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
55.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
54.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
54.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
54.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
53.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
53.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
52.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
52.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
52.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
52.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
51.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
51.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
51.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
51.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
51.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
50.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
50.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
50.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
50.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
50.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
50.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
49.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
49.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
49.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
49.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
49.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
49.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
49.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
48.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
48.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
48.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
48.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
48.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
48.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
48.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
48.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
48.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
48.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
47.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
47.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
47.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
47.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
47.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
47.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
47.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
47.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
47.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
46.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
46.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
46.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
46.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
46.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
46.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
46.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
45.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
45.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
45.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
45.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
45.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
45.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
45.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
45.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
44.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
44.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
44.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
44.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
44.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
44.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
44.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
44.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
44.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
44.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
43.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
43.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
43.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
43.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
43.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
43.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
43.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
43.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
43.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
43.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
43.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
43.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
42.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
42.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
42.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
42.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
42.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
42.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
42.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
42.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
42.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
42.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
41.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
41.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
41.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
41.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
41.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
41.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
41.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
41.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
41.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
41.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
40.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
40.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
40.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
40.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
40.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
40.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
40.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
40.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
40.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
40.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
40.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
40.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
40.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
40.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
40.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
39.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
39.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
39.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
39.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
39.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
39.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
39.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
38.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
38.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
38.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
38.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
38.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
38.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
38.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
38.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
38.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
38.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
37.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
37.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
37.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
37.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
37.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
37.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
37.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
37.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
37.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
37.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
37.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
37.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
37.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
36.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
36.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
36.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
36.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
36.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
36.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
36.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
36.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
36.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
36.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
35.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
35.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
35.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
35.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
35.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
35.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
35.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
35.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
35.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
35.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
35.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
35.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
34.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
34.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
34.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
34.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
34.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
34.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
34.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
34.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
34.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
34.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
34.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
33.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
33.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
33.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
33.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
33.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
33.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
33.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
33.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
33.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
33.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
33.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
33.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
33.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
32.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
32.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
32.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
32.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
32.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
32.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
32.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
32.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
32.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
32.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
32.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
32.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
32.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
32.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
32.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
32.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
32.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
32.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
32.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
31.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
31.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
31.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
31.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
31.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
31.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
31.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
31.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
31.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
31.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
31.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
31.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
31.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
30.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
30.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
30.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
30.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
30.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
30.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
30.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
30.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
30.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
30.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
30.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
30.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
30.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
30.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
30.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
29.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
29.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
29.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
29.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
29.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
29.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
29.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
29.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
29.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
29.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
29.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
29.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
29.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
29.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
29.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
29.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
29.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
28.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
28.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
28.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
28.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
28.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
28.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
28.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
28.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
28.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
28.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
28.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
28.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
28.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
28.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
28.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
28.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
27.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
27.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
27.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
27.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
27.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
27.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
27.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
27.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
27.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
27.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
27.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
27.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
27.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
27.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
27.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
27.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
26.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
26.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
26.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
26.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
26.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
26.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
26.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
26.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
26.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
25.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
25.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
25.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
25.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
25.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
25.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
25.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
25.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
25.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
25.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
24.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
24.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
24.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
24.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
24.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
24.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
23.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
23.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
23.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
23.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
23.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
23.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
23.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
23.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
22.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
22.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
22.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
22.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
22.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
22.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
22.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
22.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
22.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
22.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
22.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
21.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
21.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
21.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
21.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
21.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
21.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
21.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
21.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
21.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
20.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
20.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
20.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
20.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
20.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
20.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
20.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
19.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
19.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
19.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
19.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
19.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
19.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
18.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
18.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
18.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
17.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
16.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
16.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
16.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
16.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
16.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
15.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
14.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
14.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
13.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
11.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
9.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPIN1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
66.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
60.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
59.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
59.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
59.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
55.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
54.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
54.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
54.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
53.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
53.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
52.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
51.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
51.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
51.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
51.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
50.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
48.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
48.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
48.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
47.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
47.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
47.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
46.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
45.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
45.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
45.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
43.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
43.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
43.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
43.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
43.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
42.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
41.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
41.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
41.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
41.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
40.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
40.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
39.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
38.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
37.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
37.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
37.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
36.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
36.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
36.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
35.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
34.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
34.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
33.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
32.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
32.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
31.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
30.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
30.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
28.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
27.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
27.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
25.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
24.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
24.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
24.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
23.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
22.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
22.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
22.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
22.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
22.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
19.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
16.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
14.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
12.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
12.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPIN1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
79.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
74.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
70.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
65.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
64.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
64.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
62.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
62.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
61.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
58.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
57.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
55.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
53.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
50.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
50.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
49.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
49.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
49.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
49.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
48.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
48.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
47.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
46.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
46.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
44.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
44.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
44.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
43.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
43.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
43.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
43.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
42.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
41.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
41.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
41.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
41.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
40.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
40.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
40.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
39.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
39.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
39.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
39.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
38.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
38.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
38.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
38.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
38.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
38.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
38.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
37.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
37.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
37.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
37.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
36.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
36.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
36.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
36.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
35.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
35.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
35.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
35.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
34.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
34.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
34.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
34.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
34.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
34.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
34.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
34.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
33.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
33.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
33.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
33.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
33.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
33.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
33.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
32.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
32.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
32.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
32.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
31.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
31.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
31.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
31.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
31.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
30.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
30.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
30.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
30.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
30.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
30.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
30.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
29.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
29.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
29.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
29.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
29.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
29.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
29.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
29.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
29.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
28.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
28.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
28.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
28.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
28.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
28.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
28.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
27.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
27.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
27.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
27.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
27.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
26.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
26.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
26.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
26.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
26.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
26.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
26.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
25.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
25.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
25.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
25.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
25.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
25.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
25.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
25.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
24.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
24.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
24.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
24.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
24.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
24.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
24.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
23.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
23.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
23.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
23.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
23.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
23.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
21.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
20.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
20.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
20.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
20.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
20.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
20.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
19.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
19.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
19.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
19.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
19.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
18.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
18.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
18.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
17.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
16.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
16.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
15.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
15.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
14.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
14.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
13.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
11.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
10.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
10.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
9.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
7.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012640003
Normal
0.8
CPT0009060003
Tumor
0.7
CPT0078510003
Tumor
0.6
CPT0078930003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0092190003
Normal
0.6
CPT0079300001
Normal
0.5
CPT0000780007
Tumor
0.5
CPT0085670003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0010120001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0077310003
Tumor
0.4
CPT0075170001
Normal
0.4
CPT0079510001
Normal
0.4
CPT0089460004
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0017410003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0002370001
Normal
0.3
CPT0066480003
Tumor
0.3
CPT0001230001
Normal
0.3
CPT0064400001
Normal
0.3
CPT0007870001
Normal
0.3
CPT0077320001
Normal
0.3
CPT0066470004
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0081990003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0007470001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0001270001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0018250001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0011410003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0000660001
Normal
0.2
CPT0019160001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0006950001
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0087050003
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0088640003
Normal
0.1
CPT0009020003
Normal
0.1
CPT0065820001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0079180003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0066430001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0086360003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0088550004
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0078660003
Tumor
-0.1
CPT0076330003
Tumor
-0.2
CPT0078800003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0024670003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0001540009
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0012180003
Tumor
-0.3
CPT0086820003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0088480003
Tumor
-0.4
CPT0025230003
Tumor
-0.4
CPT0025050003
Tumor
-0.5
CPT0012280003
Tumor
-0.5
CPT0001180009
Tumor
-0.5
CPT0023350003
Tumor
-0.6
CPT0001340003
Tumor
-0.6
CPT0081880003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
