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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
177.1
nTPM
HPA Brain:
173.9
nTPM
GTEx:
177.1
nTPM
FANTOM5:
92.4
Scaled Tags Per Million
Pig:
167.1
nTPM
Mouse:
255.1
nTPM
Allen mouse:
22.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
173.9
Sample id
Sample description
nTPM
Amygdala nTPM: 173.9
2814
Male, age 76, right hemisphere
190.3
2695
Female, age 67, right hemisphere
181.7
2514
Male, age 75, right hemisphere
181.3
1987
Female, age 91, left hemisphere
162.1
2517
Female, age 94, left hemisphere
154.0
Basal amygdala nTPM: 151.6
2609
Male, age 75, right hemisphere
187.8
2110
Male, age 80, left hemisphere
171.1
2685
Female, age 94, left hemisphere
142.9
1955
Male, age 76, both hemispheres
142.0
2827
Female, age 67, right hemisphere
134.7
2243
Female, age 91, right hemisphere
131.2
Central amygdala nTPM: 162.0
2826
Female, age 94, left hemisphere
194.4
2515
Male, age 75, right hemisphere
177.8
1905
Male, age 76, both hemispheres
168.9
2239
Male, age 80, left hemisphere
140.0
2701
Female, age 91, right hemisphere
128.9
Corticomedial amygdala nTPM: 144.2
2428
Male, age 75, right hemisphere
194.8
2829
Male, age 80, left hemisphere
180.9
2429
Female, age 94, left hemisphere
135.0
2240
Male, age 76, both hemispheres
121.1
2242
Female, age 91, right hemisphere
120.4
2535
Female, age 67, right hemisphere
112.9
Lateral amygdala nTPM: 158.4
1883
Male, age 76, both hemispheres
180.4
2516
Male, age 75, right hemisphere
175.9
2534
Female, age 94, left hemisphere
165.3
2830
Female, age 67, right hemisphere
153.9
2256
Male, age 80, left hemisphere
144.0
2255
Female, age 91, right hemisphere
131.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
177.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 177.1
Samples: 152
Max nTPM: 303.5
Min nTPM: 124.1
Std nTPM: 28.6
Median nTPM: 174.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
303.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
254.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
251.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
249.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
248.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
243.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
239.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
234.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
232.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
225.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
224.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
223.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
219.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
218.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
212.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
211.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
209.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
208.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
207.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
207.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
203.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
201.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
200.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
200.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
199.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
199.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
199.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
198.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
198.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
197.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
197.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
197.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
196.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
194.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
194.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
194.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
193.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
193.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
192.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
191.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
189.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
189.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
189.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
189.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
189.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
189.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
188.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
185.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
185.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
185.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
185.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
184.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
182.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
181.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
181.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
180.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
180.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
179.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
179.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
179.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
179.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
179.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
178.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
177.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
177.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
177.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
176.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
176.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
175.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
175.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
175.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
174.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
174.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
174.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
174.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
174.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
173.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
173.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
172.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
172.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
171.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
170.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
170.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
170.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
169.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
169.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
169.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
169.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
169.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
167.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
167.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
167.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
167.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
166.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
166.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
165.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
165.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
165.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
164.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
163.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
163.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
163.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
161.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
161.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
160.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
160.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
159.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
158.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
158.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
158.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
158.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
157.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
157.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
157.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
157.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
156.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
156.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
156.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
155.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
155.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
154.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
154.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
153.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
152.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
152.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
151.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
151.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
151.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
150.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
150.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
147.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
146.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
146.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
146.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
145.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
144.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
144.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
143.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
142.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
141.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
141.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
141.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
140.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
140.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
139.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
139.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
138.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
135.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
132.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
130.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
128.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
124.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
255.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 255.1
Samples: 4
Max nTPM: 277.5
Min nTPM: 245.0
Sample A
Male
245.0
Sample B
Male
248.9
Sample C
Female
277.5
Sample D
Female
249.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.