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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDAP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
89.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
72.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
61.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
48.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
47.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
46.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
43.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
42.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
41.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
40.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
39.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
37.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
37.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
34.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
34.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
34.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
33.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
32.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
31.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
30.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
30.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
30.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
30.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
30.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
27.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
27.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
27.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
26.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
26.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
26.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
25.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
25.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
25.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
25.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
25.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
24.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
23.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
22.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
22.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
22.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
21.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
20.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
20.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
19.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
18.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
18.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
17.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
16.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
16.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
14.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDAP1 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
67.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
67.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
55.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
52.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
52.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
51.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
51.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
49.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
49.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
47.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
46.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
46.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
45.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
45.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
45.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
45.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
45.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
44.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
44.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
44.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
44.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
43.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
43.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
43.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
43.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
42.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
42.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
42.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
41.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
41.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
41.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
40.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
40.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
40.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
40.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
40.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
40.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
40.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
40.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
39.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
39.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
39.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
39.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
39.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
39.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
39.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
39.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
39.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
39.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
38.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
38.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
38.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
38.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
37.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
37.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
37.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
37.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
37.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
37.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
37.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
37.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
36.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
36.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
36.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
36.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
36.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
36.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
36.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
36.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
35.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
35.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
35.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
35.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
35.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
35.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
35.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
35.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
34.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
34.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
34.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
34.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
34.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
34.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
34.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
34.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
34.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
34.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
34.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
34.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
34.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
33.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
33.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
33.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
33.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
33.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
33.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
33.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
33.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
33.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
33.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
33.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
33.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
33.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
33.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
33.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
33.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
32.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
32.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
32.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
32.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
32.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
32.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
32.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
32.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
32.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
32.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
32.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
31.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
31.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
31.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
31.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
31.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
31.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
31.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
31.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
31.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
31.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
31.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
31.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
31.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
31.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
31.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
31.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
31.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
31.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
30.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
30.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
30.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
30.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
30.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
30.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
30.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
30.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
30.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
30.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
30.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
30.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
30.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
30.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
30.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
30.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
30.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
30.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
30.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
30.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
30.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
30.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
30.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
29.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
29.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
29.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
29.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
29.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
29.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
29.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
29.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
29.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
29.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
29.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
29.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
29.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
29.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
29.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
29.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
29.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
29.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
29.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
29.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
29.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
29.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
29.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
29.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
29.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
29.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
29.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
29.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
29.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
29.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
29.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
29.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
29.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
29.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
29.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
29.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
29.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
29.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
29.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
29.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
28.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
28.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
28.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
28.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
28.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
28.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
28.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
28.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
28.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
28.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
28.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
28.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
28.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
28.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
28.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
28.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
28.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
28.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
28.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
28.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
28.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
28.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
28.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
28.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
27.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
27.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
27.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
27.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
27.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
27.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
27.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
27.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
27.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
27.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
27.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
27.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
27.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
27.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
27.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
27.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
27.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
27.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
27.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
27.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
26.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
26.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
26.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
26.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
26.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
26.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
26.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
26.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
26.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
26.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
26.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
26.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
26.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
26.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
26.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
26.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
26.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
26.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
26.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
26.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
26.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
26.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
26.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
26.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
26.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
26.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
26.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
26.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
25.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
25.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
25.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
25.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
25.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
25.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
25.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
25.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
25.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
25.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
25.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
25.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
25.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
25.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
25.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
25.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
25.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
25.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
25.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
25.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
25.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
25.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
25.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
25.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
25.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
25.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
25.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
25.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
25.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
25.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
24.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
24.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
24.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
24.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
24.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
24.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
24.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
24.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
24.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
24.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
24.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
24.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
24.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
24.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
24.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
24.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
24.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
23.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
23.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
23.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
23.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
23.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
23.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
23.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
23.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
23.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
23.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
23.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
23.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
23.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
23.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
23.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
23.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
23.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
22.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
22.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
22.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
22.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
22.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
22.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
22.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
22.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
22.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
22.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
22.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
21.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
21.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
21.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
21.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
21.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
21.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
21.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
21.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
21.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
20.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
20.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
20.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
20.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
20.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
20.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
20.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
20.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
20.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
19.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
19.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
19.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
19.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
18.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
18.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
17.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
16.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
16.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
16.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
15.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDAP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
57.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
55.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
46.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
46.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
43.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
42.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
42.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
40.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
38.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
38.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
38.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
37.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
37.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
37.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
37.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
36.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
36.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
36.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
36.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
36.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
35.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
35.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
34.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
33.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
33.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
32.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
32.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
32.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
32.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
32.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
31.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
30.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
29.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
29.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
28.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
28.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
28.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
28.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
28.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
28.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
28.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
27.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
27.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
27.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
27.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
27.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
26.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
25.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
25.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
24.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
24.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
24.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
24.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
23.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
23.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
23.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
23.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
23.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
22.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
20.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
20.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
19.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
19.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
19.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
18.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDAP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
141.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
132.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
123.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
118.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
108.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
108.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
103.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
87.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
87.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
85.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
85.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
83.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
82.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
80.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
80.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
79.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
79.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
78.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
78.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
77.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
77.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
73.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
72.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
70.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
70.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
70.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
69.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
69.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
68.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
66.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
66.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
65.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
65.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
64.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
64.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
64.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
63.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
63.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
62.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
62.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
62.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
62.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
61.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
61.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
61.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
61.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
61.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
61.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
60.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
60.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
59.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
59.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
59.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
59.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
59.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
59.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
58.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
57.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
57.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
57.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
56.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
56.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
56.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
56.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
55.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
55.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
54.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
54.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
53.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
53.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
52.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
52.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
52.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
52.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
52.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
52.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
51.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
51.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
51.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
50.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
50.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
50.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
50.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
50.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
50.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
50.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
49.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
49.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
49.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
49.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
49.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
49.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
49.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
48.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
48.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
48.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
48.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
47.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
47.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
47.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
47.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
46.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
46.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
46.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
46.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
46.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
46.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
46.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
45.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
45.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
45.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
45.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
45.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
45.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
44.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
44.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
44.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
44.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
44.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
44.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
43.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
43.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
43.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
43.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
43.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
43.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
42.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
42.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
42.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
42.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
41.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
41.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
41.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
41.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
41.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
41.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
41.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
40.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
40.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
40.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
40.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
40.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
40.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
40.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
40.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
39.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
39.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
39.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
39.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
39.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
38.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
38.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
38.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
38.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
37.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
37.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
37.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
37.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
37.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
36.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
36.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
36.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
36.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
36.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
36.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
36.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
36.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
36.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
36.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
35.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
35.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
35.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
34.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
34.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
34.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
34.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
34.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
34.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
34.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
34.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
33.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
33.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
33.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
33.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
33.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
33.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
32.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
32.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
32.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
32.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
31.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
31.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
31.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
31.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
31.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
31.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
31.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
31.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
30.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
30.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
30.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
30.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
30.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
30.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
30.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
30.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
30.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
30.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
29.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
29.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
29.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
29.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
29.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
28.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
28.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
28.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
28.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
28.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
28.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
28.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
28.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
28.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
28.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
28.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
27.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
27.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
27.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
27.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
27.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
26.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
26.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
25.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
25.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
25.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
25.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
25.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
24.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
24.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
24.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
24.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
23.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
23.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
23.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
23.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
23.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
21.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
21.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
18.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
18.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
18.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
18.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
18.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
18.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
18.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
17.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
17.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
14.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0085670003
Tumor
0.9
CPT0084560003
Tumor
0.9
CPT0025110003
Tumor
0.8
CPT0015810003
Tumor
0.8
CPT0075720003
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0089460004
Tumor
0.7
CPT0014450004
Tumor
0.7
CPT0075130003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0088900003
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0001500009
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0019130003
Tumor
0.6
CPT0086950003
Tumor
0.6
CPT0079380003
Tumor
0.6
CPT0000780007
Tumor
0.6
CPT0000640003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0063630003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0089020003
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0078660003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0092790003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0065870003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0007870001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0086360003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0092160003
Tumor
0.3
CPT0025230003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0025170003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0000660001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0023710001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0012180003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0020020001
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0079180003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0025060001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0012370003
Tumor
-0.3
CPT0077140001
Normal
-0.3
CPT0069000003
Tumor
-0.3
CPT0025610001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0000890001
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0065750003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0017850003
Tumor
-0.5
CPT0081990003
Tumor
-0.5
CPT0012900004
Tumor
-0.5
CPT0009020003
Normal
-0.5
CPT0069160003
Tumor
-0.5
CPT0017450001
Normal
-0.6
CPT0012640003
Normal
-0.7
CPT0012290003
Normal
-0.7
CPT0012920003
Normal
-0.7
CPT0024680001
Normal
-0.8
CPT0009080003
Normal
-0.8
CPT0082010001
Normal
-0.8
CPT0013790003
Normal
-0.8
CPT0012090003
Normal
-0.9
CPT0018250001
Normal
-0.9
CPT0012550003
Tumor
-0.9
CPT0069190001
Normal
-1.0
CPT0024670003
Tumor
-1.0
CPT0069010001
Normal
-1.0
CPT0012770003
Normal
-1.1
CPT0012570003
Normal
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.