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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MET is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
236.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
71.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
69.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
63.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
62.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
59.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
58.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
56.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
54.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
51.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
49.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
47.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
46.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
45.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
44.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
42.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
42.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
40.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
40.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
39.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
38.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
38.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
37.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
36.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
36.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
36.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
36.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
36.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
35.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
35.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
35.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
35.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
34.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
34.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
33.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
33.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
33.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
33.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
32.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
32.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
32.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
31.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
31.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
31.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
31.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
30.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
30.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
30.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
30.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
30.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
30.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
30.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
30.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
30.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
29.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
29.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
29.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
29.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
29.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
29.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
29.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
29.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
29.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
28.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
28.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
28.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
28.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
28.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
28.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
27.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
27.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
27.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
27.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
27.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
27.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
26.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
26.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
26.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
26.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
26.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
26.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
26.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
26.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
25.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
25.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
25.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
25.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
25.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
25.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
25.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
25.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
24.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
24.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
24.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
24.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
24.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
24.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
24.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
24.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
23.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
23.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
23.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
22.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
22.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
22.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
22.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
22.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
22.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
21.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
21.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
21.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
21.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
21.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
21.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
21.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
20.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
20.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
20.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
20.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
20.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
20.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
20.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
20.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
20.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
20.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
20.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
20.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
20.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
19.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
19.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
19.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
19.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
19.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
19.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
19.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
19.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
19.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
19.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
19.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
18.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
18.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
18.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
18.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
18.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
18.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
18.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
18.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
18.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
18.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
18.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
18.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
18.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
17.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
17.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
17.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
17.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
17.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
17.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
17.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
17.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
16.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
16.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
16.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
16.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
16.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
16.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
16.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
16.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
16.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
15.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
15.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
15.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
15.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
15.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
15.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
15.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
15.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
15.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
15.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
15.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
15.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
15.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
15.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
15.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
15.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
14.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
14.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
14.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
14.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
14.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
14.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
14.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
14.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
14.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
14.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
14.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
14.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
13.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
13.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
13.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
13.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
13.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
13.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
13.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
13.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
13.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
13.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
13.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
13.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
13.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
12.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
12.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
12.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
12.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
12.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
12.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
12.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
12.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
12.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
12.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
12.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
12.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
12.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
12.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
12.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
11.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
11.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
11.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
11.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
11.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
11.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
11.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
11.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
11.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
11.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
11.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
11.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
11.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
11.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
11.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
10.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
10.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
10.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
10.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
10.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
9.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
9.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
9.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
9.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
9.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
9.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
9.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
9.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
9.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
9.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
9.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
9.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
9.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
9.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
8.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
8.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
8.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
8.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
8.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
8.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
7.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
7.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
7.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
6.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
6.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
6.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
5.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
5.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
4.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MET is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.8
Number of samples
231
Samples
Sample
Description
TPM
DO23519
0 years, male, NA, stage:3, alive, 630 days
262.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
91.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
63.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
61.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
56.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
54.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
51.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
51.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
49.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
49.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
45.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
44.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
44.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
43.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
42.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
41.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
41.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
41.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
40.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
38.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
38.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
37.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
37.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
37.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
36.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
36.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
35.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
35.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
35.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
35.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
35.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
34.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
34.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
34.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
34.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
34.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
34.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
33.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
33.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
33.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
33.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
33.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
32.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
32.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
32.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
32.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
31.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
31.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
31.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
31.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
30.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
30.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
29.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
29.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
28.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
28.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
27.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
27.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
27.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
26.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
26.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
26.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
25.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
25.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
25.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
25.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
25.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
25.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
25.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
25.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
24.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
24.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
24.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
24.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
24.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
24.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
24.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
24.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
24.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
24.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
23.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
23.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
23.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
23.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
23.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
23.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
23.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
23.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
22.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
22.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
22.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
21.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
21.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
21.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
21.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
21.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
21.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
21.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
20.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
20.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
20.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
20.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
20.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
20.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
20.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
20.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
20.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
20.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
19.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
19.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
19.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
19.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
19.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
19.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
19.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
18.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
18.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
18.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
18.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
18.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
18.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
18.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
18.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
18.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
17.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
17.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
17.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
17.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
17.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
17.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
17.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
17.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
17.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
17.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
16.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
16.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
16.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
16.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
16.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
16.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
16.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
15.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
15.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
15.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
15.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
15.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
15.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
15.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
15.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
15.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
14.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
14.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
14.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
14.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
14.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
14.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
14.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
14.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
14.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
14.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
14.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
14.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
13.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
13.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
13.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
13.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
13.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
13.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
13.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
13.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
13.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
13.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
12.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
12.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
12.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
12.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
12.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
11.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
11.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
11.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
11.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
11.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
10.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
10.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
10.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
10.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
10.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
10.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
10.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
10.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
9.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
9.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
9.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
8.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
7.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
6.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
5.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
5.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
4.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
311
Tumor
2.4
425
Tumor
1.8
661
Tumor
1.0
331
Tumor
0.9
445
Tumor
0.9
755
Tumor
0.8
481
Tumor
0.8
465
Tumor
0.8
431
Tumor
0.8
112
Tumor
0.7
967
Tumor
0.7
615
Tumor
0.7
477
Tumor
0.6
635
Tumor
0.6
353
Tumor
0.6
727
Tumor
0.5
911
Tumor
0.5
423
Tumor
0.5
867
Tumor
0.5
443
Tumor
0.5
483
Tumor
0.5
137
Tumor
0.5
977
Tumor
0.5
433
Tumor
0.4
387
Tumor
0.4
954
Normal
0.4
915
Tumor
0.4
187
Tumor
0.4
342
Normal
0.4
473
Tumor
0.4
231
Tumor
0.4
618
Normal
0.4
376
Normal
0.4
873
Tumor
0.4
162
Normal
0.4
432
Normal
0.4
123
Tumor
0.4
744
Normal
0.4
695
Tumor
0.3
647
Tumor
0.3
493
Tumor
0.3
271
Tumor
0.3
698
Normal
0.3
484
Normal
0.3
221
Tumor
0.3
482
Normal
0.3
715
Tumor
0.3
298
Normal
0.3
533
Tumor
0.3
385
Tumor
0.3
878
Normal
0.3
922
Normal
0.3
517
Tumor
0.3
127
Tumor
0.3
452
Normal
0.3
196
Normal
0.3
361
Tumor
0.3
742
Normal
0.3
261
Tumor
0.3
354
Normal
0.2
1041
Tumor
0.2
487
Tumor
0.2
497
Tumor
0.2
636
Normal
0.2
267
Tumor
0.2
186
Normal
0.2
148
Normal
0.2
964
Normal
0.2
436
Normal
0.2
358
Normal
0.2
171
Tumor
0.2
818
Normal
0.2
392
Normal
0.2
435
Tumor
0.2
665
Tumor
0.2
1027
Tumor
0.2
686
Normal
0.2
882
Normal
0.2
944
Normal
0.2
357
Tumor
0.2
114
Normal
0.2
858
Normal
0.2
696
Normal
0.2
912
Normal
0.2
527
Tumor
0.2
737
Tumor
0.2
785
Tumor
0.2
456
Normal
0.2
1014
Normal
0.2
384
Normal
0.2
365
Tumor
0.2
938
Normal
0.2
965
Tumor
0.2
128
Normal
0.2
571
Tumor
0.2
642
Normal
0.2
451
Tumor
0.2
466
Normal
0.2
564
Normal
0.2
534
Normal
0.2
861
Tumor
0.1
464
Normal
0.1
648
Normal
0.1
356
Normal
0.1
472
Normal
0.1
815
Tumor
0.1
132
Normal
0.1
111
Normal
0.1
883
Tumor
0.1
313
Tumor
0.1
746
Normal
0.1
778
Normal
0.1
756
Normal
0.1
937
Tumor
0.1
223
Tumor
0.1
963
Tumor
0.1
546
Normal
0.1
351
Tumor
0.1
448
Normal
0.1
172
Normal
0.1
468
Normal
0.1
926
Normal
0.1
228
Normal
0.1
314
Normal
0.1
426
Normal
0.1
222
Normal
0.1
135
Tumor
0.1
394
Normal
0.1
824
Normal
0.1
1046
Normal
0.1
395
Tumor
0.1
488
Normal
0.1
714
Normal
0.1
666
Normal
0.1
862
Normal
0.1
1043
Tumor
0.1
572
Normal
0.1
332
Normal
0.1
388
Normal
0.1
363
Tumor
0.1
557
Tumor
0.1
471
Tumor
0.0
462
Normal
0.0
428
Normal
0.0
1045
Tumor
0.0
1021
Tumor
0.0
446
Normal
0.0
958
Normal
0.0
723
Tumor
0.0
147
Tumor
0.0
478
Normal
0.0
1016
Normal
0.0
664
Normal
0.0
981
Tumor
0.0
414
Normal
0.0
364
Normal
0.0
982
Normal
0.0
554
Normal
0.0
415
Tumor
0.0
191
Tumor
0.0
628
Normal
0.0
924
Normal
0.0
272
Normal
0.0
344
Normal
0.0
412
Normal
0.0
124
Normal
0.0
185
Tumor
0.0
957
Tumor
0.0
865
Tumor
0.0
232
Normal
0.0
568
Normal
0.0
213
Tumor
0.0
516
Normal
0.0
526
Normal
0.0
538
Normal
0.0
616
Normal
0.0
863
Tumor
0.0
113
Tumor
0.0
161
Tumor
0.0
574
Normal
0.0
396
Normal
0.0
851
Tumor
0.0
738
Normal
0.0
1022
Normal
0.0
662
Normal
-0.1
563
Tumor
-0.1
341
Tumor
-0.1
984
Normal
-0.1
146
Normal
-0.1
1026
Normal
-0.1
1028
Normal
-0.1
745
Tumor
-0.1
728
Normal
-0.1
258
Normal
-0.1
422
Normal
-0.1
786
Normal
-0.1
352
Normal
-0.1
923
Tumor
-0.1
925
Tumor
-0.1
424
Normal
-0.1
494
Normal
-0.1
1032
Normal
-0.1
743
Tumor
-0.1
136
Normal
-0.1
195
Tumor
-0.1
474
Normal
-0.1
866
Normal
-0.1
142
Normal
-0.1
513
Tumor
-0.1
393
Tumor
-0.1
573
Tumor
-0.1
741
Tumor
-0.1
444
Normal
-0.1
131
Tumor
-0.1
214
Normal
-0.1
218
Normal
-0.1
368
Normal
-0.1
383
Tumor
-0.1
1044
Normal
-0.1
777
Tumor
-0.1
434
Normal
-0.1
411
Tumor
-0.1
141
Tumor
-0.1
367
Tumor
-0.1
1031
Tumor
-0.1
227
Tumor
-0.1
716
Normal
-0.1
343
Tumor
-0.1
257
Tumor
-0.1
952
Normal
-0.2
386
Normal
-0.2
951
Tumor
-0.2
966
Normal
-0.2
416
Normal
-0.2
976
Normal
-0.2
914
Normal
-0.2
217
Tumor
-0.2
874
Normal
-0.2
868
Normal
-0.2
498
Normal
-0.2
983
Tumor
-0.2
366
Normal
-0.2
421
Tumor
-0.2
286
Normal
-0.2
312
Normal
-0.2
145
Tumor
-0.2
285
Tumor
-0.2
955
Tumor
-0.2
567
Tumor
-0.2
672
Normal
-0.2
138
Normal
-0.2
126
Normal
-0.2
884
Normal
-0.2
553
Tumor
-0.2
813
Tumor
-0.2
525
Tumor
-0.2
975
Tumor
-0.2
427
Tumor
-0.2
528
Normal
-0.2
864
Normal
-0.2
375
Tumor
-0.2
722
Normal
-0.2
284
Normal
-0.2
224
Normal
-0.2
514
Normal
-0.2
558
Normal
-0.2
362
Normal
-0.2
816
Normal
-0.2
262
Normal
-0.2
391
Tumor
-0.2
617
Tumor
-0.3
956
Normal
-0.3
918
Normal
-0.3
328
Normal
-0.3
515
Tumor
-0.3
268
Normal
-0.3
278
Normal
-0.3
518
Normal
-0.3
968
Normal
-0.3
188
Normal
-0.3
1042
Normal
-0.3
355
Tumor
-0.3
641
Tumor
-0.3
857
Tumor
-0.3
877
Tumor
-0.3
921
Tumor
-0.3
413
Tumor
-0.3
913
Tumor
-0.4
1013
Tumor
-0.4
1025
Tumor
-0.4
685
Tumor
-0.4
297
Tumor
-0.4
463
Tumor
-0.4
277
Tumor
-0.4
455
Tumor
-0.4
823
Tumor
-0.4
697
Tumor
-0.4
881
Tumor
-0.4
492
Normal
-0.4
671
Tumor
-0.4
545
Tumor
-0.4
535
Tumor
-0.4
627
Tumor
-0.4
978
Normal
-0.4
212
Normal
-0.5
192
Normal
-0.5
916
Normal
-0.5
852
Normal
-0.5
1015
Tumor
-0.5
125
Tumor
-0.5
523
Tumor
-0.5
537
Tumor
-0.5
724
Normal
-0.5
461
Tumor
-0.5
491
Tumor
-0.5
953
Tumor
-0.5
327
Tumor
-0.6
721
Tumor
-0.6
814
Normal
-0.6
467
Tumor
-0.6
447
Tumor
-0.6
524
Normal
-0.7
663
Tumor
-0.8
713
Tumor
-0.8
536
Normal
-0.8
917
Tumor
-0.9
283
Tumor
-1.0
943
Tumor
-1.0
817
Tumor
-1.6
211
Tumor
-1.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.