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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PIK3R2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
37.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
36.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
33.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
27.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
27.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
24.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
23.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
22.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
21.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
20.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
20.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
19.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
17.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
17.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
17.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
16.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
16.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
16.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
16.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
16.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
15.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
13.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
13.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
13.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
12.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
10.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
7.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
5.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PIK3R2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
31.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
30.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
29.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
27.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
27.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
27.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
27.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
26.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
24.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
24.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
24.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
23.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
23.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
23.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
23.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
23.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
22.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
22.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
21.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
21.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
21.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
20.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
20.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
20.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
20.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
19.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
19.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
19.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
19.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
19.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
18.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
18.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
18.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
18.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
18.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
18.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
18.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
17.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
17.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
17.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
17.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
17.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
16.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
16.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
16.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
16.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
16.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
16.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
16.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
16.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
15.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
15.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
15.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
15.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
15.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
15.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
14.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
14.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
14.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
14.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
14.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
14.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
14.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
14.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
14.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
13.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
13.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
13.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
13.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
12.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
12.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
12.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
11.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
11.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
11.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
11.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
11.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
11.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
11.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
11.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
10.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
10.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
10.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
10.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
10.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
10.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
10.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
10.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
9.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
9.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
9.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
9.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
8.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
8.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
8.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
8.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
8.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
8.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
8.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
8.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
8.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
7.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
7.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
7.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
6.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
6.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
6.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
5.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
4.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
3.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
3.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
3.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
3.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
2.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
2.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
2.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
2.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
1.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PIK3R2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
36.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
36.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
33.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
31.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
30.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
29.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
28.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
28.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
26.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
25.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
24.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
24.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
24.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
23.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
23.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
23.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
23.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
22.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
22.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
22.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
22.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
22.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
22.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
21.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
21.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
20.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
20.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
20.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
20.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
19.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
19.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
19.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
18.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
18.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
17.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
17.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
16.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
15.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
15.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
14.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
13.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
12.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
10.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
9.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PIK3R2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
58.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
47.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
41.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
37.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
36.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
35.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
35.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
35.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
33.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
33.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
32.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
32.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
32.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
32.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
31.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
30.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
30.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
30.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
30.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
30.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
29.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
28.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
28.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
28.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
28.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
27.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
27.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
27.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
26.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
26.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
26.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
25.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
25.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
25.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
24.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
24.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
24.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
24.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
23.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
23.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
22.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
22.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
22.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
21.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
21.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
21.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
20.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
20.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
20.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
19.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
19.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
19.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
18.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
18.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
18.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
18.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
18.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
17.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
17.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
16.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
16.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
16.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
15.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
15.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
15.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
15.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
15.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
15.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
14.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
14.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
12.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
11.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
11.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
9.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
9.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
9.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
8.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
7.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
6.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
6.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
5.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
2.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
0.6
CPT0009060003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0084560003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0000640003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0026410003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0006630003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0025580004
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0020020001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0001270001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0014470001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0009020003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0012920003
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0001340003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0019130003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0002350011
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0092730003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0092290003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0092790003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0064370003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0086950003
Tumor
-0.5
CPT0025230003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
