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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GCDH is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
113.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
56.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
48.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
41.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
37.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
37.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
34.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
34.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
32.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
31.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
31.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
30.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
30.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
29.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
29.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
27.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
27.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
26.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
26.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
25.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
25.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
25.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
25.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
24.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
24.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
24.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
21.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
21.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
21.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
21.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
20.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
18.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
16.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
16.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
16.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
16.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
16.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
16.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
15.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
15.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
14.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
13.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
13.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
13.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
11.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
11.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
9.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GCDH is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
32.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
31.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
31.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
24.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
23.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
20.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
19.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
19.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
19.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
19.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
18.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
17.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
17.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
16.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
16.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
16.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
16.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
15.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
15.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
15.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
14.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
14.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
13.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
13.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
13.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
13.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
13.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
13.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
12.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
12.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
12.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
12.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
12.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
12.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
12.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
11.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
11.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
11.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
11.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
11.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
11.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
11.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
11.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
11.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
11.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
11.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
11.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
11.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
11.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
10.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
10.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
10.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
10.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
10.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
10.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
10.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
10.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
10.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
10.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
10.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
10.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
10.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
10.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
9.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
9.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
9.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
9.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
9.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
9.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
9.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
9.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
9.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
9.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
9.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
9.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
9.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
8.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
8.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
8.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
8.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
8.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
8.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
8.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
8.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
8.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
8.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
8.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
8.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
8.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
8.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
8.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
8.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
8.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
8.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
8.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
7.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
7.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
7.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
7.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
7.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
7.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
7.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
7.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
7.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
7.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
7.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
6.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
6.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
6.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
6.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
6.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
6.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
6.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
6.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
6.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
5.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
5.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
4.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GCDH is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
30.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
17.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
17.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
16.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
15.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
15.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
14.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
14.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
13.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
12.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
12.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
12.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
12.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
12.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
11.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
11.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
11.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
11.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
11.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
11.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
11.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
10.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
10.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
10.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
10.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
9.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
9.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
9.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
9.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
9.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
9.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
8.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
8.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
8.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
8.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
8.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
7.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
7.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
7.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
7.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GCDH is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
82.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
76.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
59.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
58.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
53.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
51.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
45.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
43.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
41.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
41.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
40.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
40.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
38.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
36.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
34.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
33.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
33.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
32.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
32.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
31.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
30.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
29.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
29.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
29.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
28.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
28.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
28.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
28.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
28.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
28.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
28.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
28.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
27.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
27.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
27.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
26.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
26.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
26.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
26.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
26.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
26.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
25.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
24.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
24.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
24.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
24.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
23.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
23.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
23.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
23.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
23.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
22.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
22.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
22.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
22.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
22.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
21.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
21.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
21.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
21.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
21.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
21.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
21.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
20.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
20.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
20.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
20.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
20.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
20.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
20.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
20.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
19.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
19.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
19.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
19.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
19.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
19.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
18.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
18.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
18.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
17.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
17.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
17.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
17.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
17.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
17.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
17.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
17.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
17.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
17.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
17.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
16.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
15.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
15.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
15.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
15.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
14.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
14.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
14.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
14.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
14.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
14.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
13.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
13.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
13.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
13.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
13.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
13.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
12.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
12.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
12.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
12.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
12.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
12.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
11.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
11.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
11.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
11.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
10.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
10.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
10.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
10.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
8.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
7.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
7.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
7.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
6.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
6.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
1.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
1.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0009080003
Normal
1.5
CPT0077140001
Normal
1.5
CPT0065450001
Normal
1.4
CPT0079430001
Normal
1.1
CPT0078840001
Normal
1.1
CPT0088920001
Normal
1.1
CPT0012090003
Normal
1.1
CPT0092800003
Normal
1.1
CPT0077500001
Normal
1.1
CPT0078940001
Normal
1.1
CPT0006730001
Normal
1.0
CPT0087050003
Normal
1.0
CPT0000790001
Normal
1.0
CPT0012770003
Normal
1.0
CPT0066430001
Normal
0.9
CPT0078670001
Normal
0.9
CPT0069010001
Normal
0.9
CPT0076350001
Normal
0.9
CPT0026420001
Normal
0.9
CPT0010170001
Normal
0.8
CPT0089480003
Normal
0.8
CPT0088640003
Normal
0.8
CPT0088710001
Normal
0.7
CPT0092310003
Normal
0.7
CPT0023360001
Normal
0.7
CPT0079000001
Normal
0.6
CPT0013790003
Normal
0.6
CPT0012570003
Normal
0.6
CPT0025610001
Normal
0.6
CPT0009020003
Normal
0.6
CPT0000890001
Normal
0.6
CPT0014350001
Normal
0.6
CPT0017450001
Normal
0.6
CPT0081620001
Normal
0.6
CPT0063640001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0001350001
Normal
0.5
CPT0025060001
Normal
0.5
CPT0078530001
Normal
0.5
CPT0086890003
Normal
0.5
CPT0018250001
Normal
0.4
CPT0065820001
Normal
0.4
CPT0079180003
Tumor
0.4
CPT0075570001
Normal
0.4
CPT0007470001
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0002370001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0006950001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0066520001
Normal
0.3
CPT0078660003
Tumor
0.3
CPT0088570001
Normal
0.3
CPT0020020001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0020130001
Normal
0.3
CPT0012290003
Normal
0.3
CPT0086970003
Normal
0.2
CPT0007870001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0001230001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0014130001
Normal
0.1
CPT0001190001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0014470001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0019160001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0069190001
Normal
-0.2
CPT0092290003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0012900004
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0020120003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0077310003
Tumor
-0.3
CPT0024670003
Tumor
-0.4
CPT0001270001
Normal
-0.4
CPT0019990003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0000780007
Tumor
-0.5
CPT0009000003
Tumor
-0.5
CPT0075170001
Normal
-0.5
CPT0066470004
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0087040003
Tumor
-0.6
CPT0014160003
Tumor
-0.6
CPT0006440003
Tumor
-0.6
CPT0076330003
Tumor
-0.6
CPT0009060003
Tumor
-0.6
CPT0079300001
Normal
-0.6
CPT0063320003
Tumor
-0.6
CPT0007860003
Tumor
-0.6
CPT0065810003
Tumor
-0.6
CPT0023350003
Tumor
-0.6
CPT0000640003
Tumor
-0.7
CPT0086950003
Tumor
-0.7
CPT0025050003
Tumor
-0.7
CPT0088900003
Tumor
-0.7
CPT0006900003
Tumor
-0.7
CPT0088550004
Tumor
-0.7
CPT0092790003
Tumor
-0.7
CPT0023690003
Tumor
-0.7
CPT0011240003
Tumor
-0.7
CPT0086360003
Tumor
-0.8
CPT0075560003
Tumor
-0.8
CPT0088630003
Tumor
-0.8
CPT0014370004
Tumor
-0.8
CPT0014450004
Tumor
-0.8
CPT0065430003
Tumor
-0.8
CPT0007320003
Tumor
-0.8
CPT0001260009
Tumor
-0.8
CPT0084590001
Normal
-0.8
CPT0088690003
Tumor
-0.8
CPT0069000003
Tumor
-0.8
CPT0026410003
Tumor
-0.8
CPT0015910003
Tumor
-0.8
CPT0012550003
Tumor
-0.9
CPT0006630003
Tumor
-0.9
CPT0089020003
Tumor
-0.9
CPT0001540009
Tumor
-0.9
CPT0063630003
Tumor
-0.9
CPT0017410003
Tumor
-0.9
CPT0075720003
Tumor
-0.9
CPT0069160003
Tumor
-0.9
CPT0001220008
Tumor
-0.9
CPT0019130003
Tumor
-0.9
CPT0088760003
Tumor
-0.9
CPT0000870016
Tumor
-0.9
CPT0086870003
Tumor
-0.9
CPT0012670003
Tumor
-0.9
CPT0012280003
Tumor
-0.9
CPT0088480003
Tumor
-0.9
CPT0092160003
Tumor
-1.0
CPT0025880003
Tumor
-1.0
CPT0077320001
Normal
-1.0
CPT0081600003
Tumor
-1.0
CPT0010160003
Tumor
-1.0
CPT0079270003
Tumor
-1.0
CPT0002350011
Tumor
-1.0
CPT0086820003
Tumor
-1.0
CPT0012080003
Tumor
-1.0
CPT0092190003
Normal
-1.0
CPT0012370003
Tumor
-1.0
CPT0088970003
Tumor
-1.0
CPT0075130003
Tumor
-1.0
CPT0092730003
Tumor
-1.0
CPT0079480003
Tumor
-1.1
CPT0021240003
Tumor
-1.1
CPT0071150004
Tumor
-1.1
CPT0010110003
Tumor
-1.1
CPT0081990003
Tumor
-1.1
CPT0012180003
Tumor
-1.1
CPT0077110003
Tumor
-1.1
CPT0025580004
Tumor
-1.2
CPT0081880003
Tumor
-1.2
CPT0084560003
Tumor
-1.2
CPT0079410003
Tumor
-1.2
CPT0025170003
Tumor
-1.2
CPT0078830003
Tumor
-1.2
CPT0065870003
Tumor
-1.2
CPT0001180009
Tumor
-1.2
CPT0001340003
Tumor
-1.3
CPT0078800003
Tumor
-1.3
CPT0077490003
Tumor
-1.3
CPT0017850003
Tumor
-1.3
CPT0078990003
Tumor
-1.3
CPT0025110003
Tumor
-1.4
CPT0065930003
Tumor
-1.5
CPT0065690003
Tumor
-1.5
CPT0025290003
Tumor
-1.7
CPT0025230003
Tumor
-1.7
CPT0011410003
Tumor
-1.7
CPT0025350003
Tumor
-1.7
CPT0085670003
Tumor
-1.8
CPT0015730003
Tumor
-1.9
CPT0079230003
Tumor
-2.1
CPT0079380003
Tumor
-2.2
CPT0015810003
Tumor
-2.2
CPT0065750003
Tumor
-2.4
CPT0086030003
Tumor
-2.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
