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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNPO2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
71.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
66.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
61.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
60.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
59.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
56.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
56.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
53.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
50.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
48.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
47.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
45.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
45.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
44.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
44.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
44.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
44.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
42.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
40.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
40.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
40.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
39.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
39.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
37.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
37.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
35.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
34.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
33.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
33.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
33.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
33.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
33.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
33.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
32.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
32.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
31.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
30.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
30.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
30.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
29.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
29.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
28.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
27.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
27.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
27.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
25.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
25.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
23.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
23.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
22.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
21.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
19.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
18.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
17.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
17.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
15.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNPO2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
46.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
42.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
40.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
39.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
38.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
37.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
36.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
36.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
35.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
35.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
35.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
35.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
35.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
35.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
35.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
35.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
34.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
33.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
33.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
33.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
33.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
33.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
33.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
33.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
32.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
32.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
32.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
32.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
32.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
32.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
32.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
31.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
31.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
31.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
31.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
31.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
31.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
31.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
30.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
30.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
30.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
30.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
30.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
30.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
30.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
30.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
30.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
30.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
29.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
29.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
29.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
29.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
29.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
29.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
29.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
29.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
29.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
28.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
28.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
28.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
28.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
28.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
28.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
28.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
28.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
28.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
28.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
28.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
28.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
28.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
28.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
27.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
27.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
27.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
27.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
27.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
27.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
27.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
27.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
27.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
27.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
26.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
26.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
26.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
26.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
26.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
26.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
26.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
26.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
26.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
26.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
26.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
26.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
26.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
26.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
26.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
26.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
25.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
25.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
25.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
25.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
25.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
25.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
25.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
25.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
25.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
25.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
25.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
25.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
25.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
25.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
25.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
25.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
25.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
25.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
25.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
25.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
25.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
25.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
25.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
24.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
24.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
24.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
24.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
24.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
24.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
24.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
24.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
24.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
24.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
24.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
24.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
24.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
24.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
24.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
23.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
23.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
23.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
23.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
23.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
23.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
23.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
23.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
23.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
23.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
23.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
23.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
23.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
23.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
22.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
22.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
22.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
22.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
22.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
22.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
22.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
22.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
22.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
22.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
22.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
22.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
22.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
22.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
22.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
22.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
21.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
21.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
21.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
21.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
21.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
21.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
21.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
21.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
21.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
21.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
21.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
21.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
21.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
21.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
21.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
21.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
21.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
21.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
20.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
20.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
20.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
20.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
20.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
20.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
20.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
20.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
20.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
19.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
19.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
19.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
19.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
19.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
19.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
19.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
19.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
19.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
19.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
18.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
18.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
18.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
18.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
18.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
18.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
18.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
18.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
18.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
18.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
18.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
18.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
18.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
18.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
18.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
17.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
17.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
17.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
17.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
17.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
17.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
16.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
16.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
16.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
16.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
15.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
15.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
15.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
15.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
15.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
15.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
14.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
14.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
14.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
14.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
13.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
13.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
13.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
9.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
9.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
8.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNPO2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
48.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
40.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
37.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
36.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
34.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
34.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
33.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
31.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
31.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
30.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
30.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
30.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
30.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
30.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
29.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
29.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
29.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
29.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
28.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
28.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
28.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
27.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
27.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
27.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
27.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
27.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
27.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
26.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
26.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
25.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
25.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
25.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
25.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
25.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
25.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
24.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
24.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
24.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
24.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
23.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
23.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
22.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
22.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
21.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
21.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
21.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
21.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
21.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
20.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
19.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
19.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
19.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
19.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
19.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
16.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNPO2 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
74.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
60.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
57.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
55.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
50.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
47.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
46.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
46.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
46.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
45.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
44.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
43.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
43.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
42.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
42.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
40.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
39.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
39.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
38.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
38.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
38.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
38.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
38.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
38.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
38.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
37.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
37.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
37.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
37.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
36.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
36.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
36.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
35.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
35.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
35.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
35.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
35.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
35.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
35.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
34.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
34.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
33.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
33.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
33.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
33.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
33.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
33.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
33.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
32.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
32.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
32.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
32.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
32.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
32.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
32.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
32.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
32.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
31.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
31.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
31.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
31.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
31.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
30.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
30.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
30.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
29.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
29.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
29.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
29.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
28.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
28.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
27.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
27.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
27.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
27.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
27.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
26.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
26.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
26.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
26.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
26.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
26.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
26.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
26.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
25.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
25.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
25.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
25.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
25.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
25.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
25.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
24.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
24.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
24.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
24.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
24.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
24.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
24.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
24.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
24.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
23.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
23.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
23.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
23.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
23.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
23.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
23.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
23.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
23.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
23.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
23.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
23.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
23.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
23.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
22.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
22.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
22.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
22.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
22.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
22.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
22.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
21.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
21.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
21.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
21.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
21.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
21.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
20.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
20.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
20.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
20.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
20.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
20.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
19.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
19.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
19.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
19.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
19.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
19.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
19.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
19.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
18.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
18.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
18.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
18.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
17.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
17.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
17.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
17.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
17.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
16.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
16.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
16.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
16.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
16.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
15.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
15.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
15.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
15.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
14.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
14.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
14.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
14.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
13.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
12.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
12.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
0.8
CPT0088970003
Tumor
0.8
CPT0001180009
Tumor
0.7
CPT0000640003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0011410003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0006440003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0075130003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0007320003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0086830003
Normal
0.1
CPT0009020003
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0086890003
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0077320001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0087050003
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0081620001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0007470001
Normal
0.0
CPT0025060001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0012550003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0063320003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0020130001
Normal
-0.2
CPT0017410003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0075560003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0078530001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
