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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BCAT2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
95.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
95.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
89.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
79.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
75.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
75.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
74.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
70.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
69.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
66.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
66.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
66.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
66.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
61.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
61.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
59.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
59.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
57.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
57.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
57.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
57.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
56.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
55.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
54.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
53.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
52.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
50.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
49.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
49.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
49.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
49.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
48.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
47.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
45.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
45.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
43.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
43.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
43.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
42.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
42.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
38.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
38.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
38.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
38.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
37.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
37.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
37.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
34.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
33.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
33.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
32.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
32.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
30.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
30.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
28.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
26.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
24.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
23.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
22.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
21.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
19.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BCAT2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
65.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
65.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
65.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
63.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
62.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
57.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
56.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
53.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
53.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
53.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
52.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
51.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
51.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
51.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
50.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
49.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
49.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
48.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
48.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
48.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
48.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
48.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
48.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
48.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
47.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
47.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
46.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
45.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
45.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
45.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
44.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
44.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
43.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
43.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
43.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
43.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
43.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
42.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
42.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
42.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
41.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
41.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
41.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
41.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
41.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
41.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
41.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
40.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
40.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
40.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
40.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
39.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
39.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
38.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
38.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
38.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
38.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
37.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
37.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
37.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
37.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
37.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
37.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
37.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
36.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
36.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
36.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
36.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
36.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
36.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
36.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
36.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
36.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
36.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
35.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
35.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
35.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
35.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
35.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
35.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
35.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
35.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
35.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
35.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
35.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
35.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
35.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
34.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
34.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
34.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
34.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
34.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
34.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
34.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
33.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
33.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
33.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
33.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
33.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
33.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
33.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
33.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
33.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
33.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
33.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
33.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
33.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
32.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
32.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
32.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
32.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
32.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
32.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
32.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
32.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
32.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
32.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
32.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
31.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
31.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
31.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
31.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
31.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
31.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
31.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
31.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
31.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
31.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
31.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
31.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
31.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
31.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
31.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
31.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
31.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
30.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
30.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
30.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
30.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
30.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
30.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
30.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
30.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
30.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
30.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
30.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
30.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
30.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
30.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
30.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
30.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
30.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
30.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
30.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
29.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
29.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
29.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
29.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
29.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
29.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
29.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
29.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
29.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
29.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
29.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
29.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
29.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
29.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
28.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
28.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
28.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
28.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
28.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
28.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
28.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
28.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
28.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
28.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
28.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
28.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
28.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
28.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
28.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
28.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
28.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
28.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
28.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
28.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
28.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
28.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
27.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
27.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
27.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
27.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
27.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
27.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
27.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
27.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
27.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
27.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
27.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
27.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
27.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
27.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
27.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
26.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
26.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
26.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
26.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
26.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
26.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
26.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
26.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
26.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
26.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
26.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
26.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
26.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
26.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
26.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
26.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
26.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
26.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
26.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
26.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
26.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
26.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
26.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
26.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
25.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
25.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
25.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
25.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
25.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
25.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
25.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
25.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
25.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
25.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
25.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
25.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
25.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
25.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
25.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
25.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
25.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
24.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
24.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
24.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
24.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
24.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
24.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
24.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
24.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
24.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
24.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
24.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
24.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
24.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
24.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
24.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
24.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
24.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
24.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
24.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
24.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
24.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
24.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
24.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
23.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
23.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
23.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
23.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
23.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
23.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
23.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
23.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
23.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
23.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
23.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
23.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
23.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
22.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
22.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
22.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
22.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
22.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
22.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
22.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
22.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
22.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
22.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
22.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
22.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
22.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
22.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
22.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
21.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
21.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
21.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
21.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
21.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
21.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
21.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
21.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
21.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
21.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
21.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
21.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
21.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
20.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
20.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
20.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
20.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
20.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
20.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
20.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
20.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
20.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
20.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
19.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
19.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
19.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
19.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
19.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
19.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
19.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
19.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
19.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
18.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
18.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
18.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
17.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
17.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
17.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
16.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
16.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
16.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
16.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
16.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
15.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
15.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
15.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
13.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
12.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BCAT2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
70.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
54.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
48.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
46.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
44.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
44.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
42.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
40.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
39.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
39.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
39.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
38.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
38.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
38.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
37.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
37.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
36.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
35.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
34.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
33.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
33.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
32.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
32.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
31.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
31.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
31.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
31.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
30.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
29.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
29.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
29.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
28.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
28.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
27.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
27.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
26.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
26.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
26.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
26.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
26.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
26.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
26.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
25.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
25.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
25.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
25.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
25.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
24.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
24.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
23.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
23.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
23.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
21.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
21.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
21.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
20.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
19.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
18.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
17.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
15.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BCAT2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
180.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
172.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
167.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
155.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
153.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
151.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
147.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
145.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
119.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
118.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
117.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
110.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
107.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
105.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
101.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
98.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
98.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
95.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
95.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
92.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
92.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
90.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
89.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
88.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
88.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
87.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
86.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
86.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
85.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
85.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
84.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
84.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
83.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
82.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
81.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
80.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
80.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
79.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
79.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
79.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
78.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
77.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
77.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
76.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
75.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
75.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
74.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
74.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
73.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
73.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
72.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
72.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
72.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
72.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
71.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
71.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
71.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
71.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
71.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
71.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
70.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
69.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
68.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
68.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
68.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
68.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
68.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
68.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
68.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
68.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
68.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
67.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
67.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
67.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
66.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
66.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
66.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
66.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
66.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
66.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
65.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
64.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
64.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
64.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
63.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
63.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
63.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
63.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
63.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
63.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
63.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
62.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
62.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
62.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
62.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
62.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
62.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
61.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
61.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
61.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
61.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
60.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
60.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
60.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
60.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
60.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
59.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
59.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
59.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
59.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
58.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
58.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
58.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
58.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
57.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
57.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
57.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
57.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
57.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
57.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
57.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
56.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
56.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
55.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
55.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
55.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
55.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
55.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
54.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
54.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
54.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
54.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
54.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
53.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
53.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
52.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
52.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
52.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
51.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
51.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
51.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
51.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
51.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
50.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
50.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
50.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
49.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
49.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
49.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
49.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
48.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
48.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
48.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
48.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
48.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
48.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
48.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
47.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
47.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
47.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
47.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
47.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
47.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
47.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
47.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
47.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
46.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
46.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
46.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
46.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
45.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
45.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
45.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
45.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
45.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
45.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
44.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
44.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
44.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
43.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
43.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
43.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
43.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
43.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
43.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
43.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
43.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
43.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
42.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
42.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
42.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
42.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
42.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
42.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
41.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
41.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
41.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
41.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
41.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
41.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
41.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
41.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
41.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
40.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
40.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
40.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
40.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
39.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
39.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
39.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
39.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
39.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
38.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
38.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
38.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
38.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
38.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
38.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
37.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
37.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
37.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
36.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
36.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
36.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
36.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
36.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
36.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
36.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
36.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
35.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
35.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
34.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
34.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
34.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
34.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
34.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
33.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
33.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
33.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
31.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
31.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
31.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
30.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
30.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
30.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
29.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
29.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
29.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
29.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
28.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
28.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
28.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
27.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
27.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
27.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
26.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
26.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
25.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
25.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
25.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
25.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
24.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
20.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
20.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
19.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
17.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
16.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
15.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
14.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
13.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
2.0
CPT0078660003
Tumor
1.3
CPT0078800003
Tumor
1.0
CPT0079180003
Tumor
1.0
CPT0088640003
Normal
0.9
CPT0069010001
Normal
0.7
CPT0001230001
Normal
0.7
CPT0069000003
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0012770003
Normal
0.6
CPT0025610001
Normal
0.5
CPT0007470001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0010170001
Normal
0.5
CPT0079430001
Normal
0.5
CPT0069190001
Normal
0.4
CPT0000790001
Normal
0.4
CPT0012180003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0077140001
Normal
0.4
CPT0065450001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0078940001
Normal
0.4
CPT0079000001
Normal
0.4
CPT0009060003
Tumor
0.3
CPT0006950001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0009080003
Normal
0.3
CPT0024680001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0006530001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0088500001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0089480003
Normal
0.2
CPT0078530001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0076350001
Normal
0.2
CPT0014370004
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0025920001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0078840001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0082010001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0012570003
Normal
0.1
CPT0063330001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0001350001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0020020001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0006730001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0079300001
Normal
0.0
CPT0023350003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0088690003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0000640003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0007860003
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0012370003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0001500009
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0088550004
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0025230003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0063320003
Tumor
-0.4
CPT0017410003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0088920001
Normal
-0.4
CPT0019990003
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0071150004
Tumor
-0.5
CPT0065930003
Tumor
-0.5
CPT0023690003
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0015730003
Tumor
-0.5
CPT0079270003
Tumor
-0.5
CPT0014160003
Tumor
-0.5
CPT0065430003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0088900003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0015910003
Tumor
-0.5
CPT0084560003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0012080003
Tumor
-0.6
CPT0086820003
Tumor
-0.6
CPT0086360003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0079410003
Tumor
-0.6
CPT0088760003
Tumor
-0.6
CPT0063630003
Tumor
-0.6
CPT0075560003
Tumor
-0.6
CPT0092730003
Tumor
-0.6
CPT0006900003
Tumor
-0.6
CPT0019130003
Tumor
-0.6
CPT0092190003
Normal
-0.6
CPT0079380003
Tumor
-0.7
CPT0002350011
Tumor
-0.7
CPT0079230003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0078830003
Tumor
-0.7
CPT0088970003
Tumor
-0.8
CPT0025580004
Tumor
-0.8
CPT0065870003
Tumor
-0.8
CPT0092160003
Tumor
-0.8
CPT0001220008
Tumor
-0.8
CPT0088480003
Tumor
-0.8
CPT0015810003
Tumor
-0.8
CPT0025290003
Tumor
-0.8
CPT0001340003
Tumor
-0.9
CPT0017850003
Tumor
-0.9
CPT0025170003
Tumor
-0.9
CPT0001180009
Tumor
-1.0
CPT0065690003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.