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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFB1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
83.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
82.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
75.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
68.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
67.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
57.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
54.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
48.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
41.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
37.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
35.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
30.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
26.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
25.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
23.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
20.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
20.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
19.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
18.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
16.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
15.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
13.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
13.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
13.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
12.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
10.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
10.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
4.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
3.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
3.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
3.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFB1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
306.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
261.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
232.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
212.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
191.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
169.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
167.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
166.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
165.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
163.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
163.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
154.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
150.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
147.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
146.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
145.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
143.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
140.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
137.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
135.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
132.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
131.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
129.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
127.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
125.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
120.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
119.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
119.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
116.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
115.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
114.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
114.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
113.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
113.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
112.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
111.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
108.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
108.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
108.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
106.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
106.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
106.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
105.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
104.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
103.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
103.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
102.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
101.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
100.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
99.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
98.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
98.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
98.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
97.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
97.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
95.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
95.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
94.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
94.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
93.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
93.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
92.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
92.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
91.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
91.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
91.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
91.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
90.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
89.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
89.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
88.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
88.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
88.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
88.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
88.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
87.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
87.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
86.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
86.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
86.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
86.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
85.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
85.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
84.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
84.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
84.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
84.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
84.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
84.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
84.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
84.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
83.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
83.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
83.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
83.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
83.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
83.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
82.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
82.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
82.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
82.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
82.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
82.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
81.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
81.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
81.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
80.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
80.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
80.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
80.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
80.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
80.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
79.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
79.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
79.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
78.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
78.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
78.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
78.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
77.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
77.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
77.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
77.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
76.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
76.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
76.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
76.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
76.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
75.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
75.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
75.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
74.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
74.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
74.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
74.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
73.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
73.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
73.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
73.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
73.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
72.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
72.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
72.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
72.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
71.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
71.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
71.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
71.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
71.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
71.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
71.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
71.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
71.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
71.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
71.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
71.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
71.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
70.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
70.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
70.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
70.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
70.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
70.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
70.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
69.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
69.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
69.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
69.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
69.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
69.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
69.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
68.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
68.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
68.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
68.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
68.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
68.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
68.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
68.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
68.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
67.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
67.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
67.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
67.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
67.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
67.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
67.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
67.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
66.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
66.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
66.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
66.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
66.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
66.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
66.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
66.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
65.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
65.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
65.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
65.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
65.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
65.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
65.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
64.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
64.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
64.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
64.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
64.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
64.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
64.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
64.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
64.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
64.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
64.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
64.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
64.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
64.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
63.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
63.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
63.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
63.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
63.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
63.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
63.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
63.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
63.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
63.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
63.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
63.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
63.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
63.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
62.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
62.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
62.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
62.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
62.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
62.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
62.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
61.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
61.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
61.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
61.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
61.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
61.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
61.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
61.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
61.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
60.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
60.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
59.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
59.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
59.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
59.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
59.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
59.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
59.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
59.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
59.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
59.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
59.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
59.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
59.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
59.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
59.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
58.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
58.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
58.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
58.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
58.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
58.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
58.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
57.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
57.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
57.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
57.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
57.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
56.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
56.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
56.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
56.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
56.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
55.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
55.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
55.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
55.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
55.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
55.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
54.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
54.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
54.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
54.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
54.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
53.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
53.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
53.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
53.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
53.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
53.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
52.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
52.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
52.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
52.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
52.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
52.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
51.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
51.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
51.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
51.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
51.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
51.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
51.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
51.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
51.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
51.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
51.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
51.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
51.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
50.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
50.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
50.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
50.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
50.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
50.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
50.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
50.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
50.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
50.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
50.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
50.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
49.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
49.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
49.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
49.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
49.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
49.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
49.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
48.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
48.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
48.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
48.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
47.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
47.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
47.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
47.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
47.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
47.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
47.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
47.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
47.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
46.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
46.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
46.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
46.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
46.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
46.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
46.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
46.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
46.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
46.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
45.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
45.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
45.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
45.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
45.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
45.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
44.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
44.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
44.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
44.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
44.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
44.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
44.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
44.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
43.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
43.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
43.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
43.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
43.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
43.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
43.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
43.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
42.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
42.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
42.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
42.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
41.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
41.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
41.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
41.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
41.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
41.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
41.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
41.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
41.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
40.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
40.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
40.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
39.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
39.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
39.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
38.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
38.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
38.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
38.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
38.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
38.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
38.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
38.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
38.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
38.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
38.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
37.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
37.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
36.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
36.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
36.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
36.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
36.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
36.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
36.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
36.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
36.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
36.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
35.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
35.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
35.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
34.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
34.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
34.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
34.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
33.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
33.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
33.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
33.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
33.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
33.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
31.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
31.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
31.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
31.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
31.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
30.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
30.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
29.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
29.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
29.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
28.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
28.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
28.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
27.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
27.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
27.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
27.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
27.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
26.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
26.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
26.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
26.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
26.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
26.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
25.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
25.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
25.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
25.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
24.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
24.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
23.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
23.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
22.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
22.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
22.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
21.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
21.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
20.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
20.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
19.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
19.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
18.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
17.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
14.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
14.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
14.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
12.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
7.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFB1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
78.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
271.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
251.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
209.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
177.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
152.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
147.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
144.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
141.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
133.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
129.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
124.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
121.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
114.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
112.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
111.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
108.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
107.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
107.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
102.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
101.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
99.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
98.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
96.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
92.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
92.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
88.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
87.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
86.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
85.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
84.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
83.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
83.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
81.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
81.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
81.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
79.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
79.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
78.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
78.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
78.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
76.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
76.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
75.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
75.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
74.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
74.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
72.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
71.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
70.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
69.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
68.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
68.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
67.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
67.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
66.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
65.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
64.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
64.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
64.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
63.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
63.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
62.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
60.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
60.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
59.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
59.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
58.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
58.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
58.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
58.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
57.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
56.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
54.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
54.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
52.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
51.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
50.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
49.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
49.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
46.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
45.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
45.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
44.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
44.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
41.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
38.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
37.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
37.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
35.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
35.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
28.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
18.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
17.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
13.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TGFB1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
248.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
200.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
198.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
145.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
124.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
113.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
111.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
103.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
94.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
90.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
90.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
78.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
77.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
74.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
73.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
71.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
67.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
64.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
64.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
60.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
59.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
58.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
58.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
58.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
56.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
55.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
55.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
54.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
53.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
52.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
52.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
50.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
50.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
49.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
47.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
47.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
47.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
47.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
46.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
45.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
45.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
42.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
41.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
41.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
41.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
41.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
39.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
39.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
39.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
39.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
38.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
38.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
38.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
38.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
38.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
37.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
37.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
37.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
36.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
36.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
35.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
35.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
34.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
34.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
33.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
33.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
33.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
33.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
32.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
32.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
32.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
32.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
32.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
30.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
30.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
30.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
29.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
29.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
29.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
29.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
29.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
29.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
29.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
28.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
28.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
27.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
27.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
27.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
27.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
26.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
26.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
26.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
26.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
25.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
25.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
25.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
25.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
25.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
24.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
24.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
24.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
23.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
23.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
23.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
23.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
23.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
23.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
23.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
22.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
22.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
22.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
22.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
22.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
22.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
22.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
22.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
21.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
21.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
21.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
21.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
21.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
20.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
19.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
19.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
19.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
19.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
19.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
18.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
18.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
18.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
17.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
17.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
16.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
16.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
16.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
15.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
15.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
14.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
13.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
13.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
13.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
12.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
11.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
11.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
11.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
10.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
9.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
8.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
8.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
6.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
6.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
6.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
5.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
2.3
CPT0076330003
Tumor
1.7
CPT0084560003
Tumor
1.6
CPT0069160003
Tumor
1.5
CPT0088690003
Tumor
1.5
CPT0063630003
Tumor
1.4
CPT0085670003
Tumor
1.3
CPT0000640003
Tumor
1.2
CPT0088630003
Tumor
1.1
CPT0001260009
Tumor
1.0
CPT0069000003
Tumor
1.0
CPT0012670003
Tumor
1.0
CPT0012080003
Tumor
0.9
CPT0065690003
Tumor
0.9
CPT0088760003
Tumor
0.9
CPT0025110003
Tumor
0.9
CPT0078510003
Tumor
0.8
CPT0077490003
Tumor
0.8
CPT0081600003
Tumor
0.8
CPT0025350003
Tumor
0.7
CPT0089020003
Tumor
0.7
CPT0012280003
Tumor
0.7
CPT0077110003
Tumor
0.7
CPT0075720003
Tumor
0.7
CPT0092290003
Tumor
0.7
CPT0081990003
Tumor
0.7
CPT0017410003
Tumor
0.7
CPT0015910003
Tumor
0.7
CPT0066470004
Tumor
0.7
CPT0065870003
Tumor
0.7
CPT0009060003
Tumor
0.6
CPT0012550003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0092790003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0006900003
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0023350003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0001220008
Tumor
0.4
CPT0079230003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0001500009
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0065930003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0007860003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0078930003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0065810003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0019130003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0002350011
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0084590001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0012900004
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0078830003
Tumor
-0.3
CPT0088710001
Normal
-0.3
CPT0002370001
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0001510001
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0079300001
Normal
-0.5
CPT0000660001
Normal
-0.5
CPT0020020001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0024680001
Normal
-0.5
CPT0000890001
Normal
-0.5
CPT0001190001
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0082010001
Normal
-0.5
CPT0014450004
Tumor
-0.5
CPT0012640003
Normal
-0.5
CPT0078670001
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0001550001
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0075170001
Normal
-0.5
CPT0088570001
Normal
-0.5
CPT0081620001
Normal
-0.5
CPT0012090003
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0078530001
Normal
-0.6
CPT0007470001
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0006950001
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0012920003
Normal
-0.6
CPT0017450001
Normal
-0.6
CPT0025920001
Normal
-0.6
CPT0020130001
Normal
-0.6
CPT0009020003
Normal
-0.6
CPT0014130001
Normal
-0.6
CPT0001230001
Normal
-0.7
CPT0087050003
Normal
-0.7
CPT0063330001
Normal
-0.7
CPT0089040001
Normal
-0.7
CPT0092310003
Normal
-0.7
CPT0066520001
Normal
-0.7
CPT0023710001
Normal
-0.7
CPT0006730001
Normal
-0.7
CPT0001350001
Normal
-0.7
CPT0077140001
Normal
-0.7
CPT0092740003
Normal
-0.7
CPT0078840001
Normal
-0.7
CPT0078800003
Tumor
-0.7
CPT0086970003
Normal
-0.7
CPT0088500001
Normal
-0.7
CPT0088920001
Normal
-0.8
CPT0006530001
Normal
-0.8
CPT0007870001
Normal
-0.8
CPT0078940001
Normal
-0.8
CPT0019160001
Normal
-0.8
CPT0012770003
Normal
-0.8
CPT0009080003
Normal
-0.8
CPT0079430001
Normal
-0.8
CPT0079000001
Normal
-0.8
CPT0065450001
Normal
-0.8
CPT0079180003
Tumor
-0.8
CPT0064400001
Normal
-0.9
CPT0086890003
Normal
-0.9
CPT0089480003
Normal
-0.9
CPT0002270011
Tumor
-0.9
CPT0066430001
Normal
-0.9
CPT0092800003
Normal
-0.9
CPT0088970003
Tumor
-1.0
CPT0000790001
Normal
-1.0
CPT0086370003
Normal
-1.0
CPT0088640003
Normal
-1.1
CPT0026420001
Normal
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.