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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC1A5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
220.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
213.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
208.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
135.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
129.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
125.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
116.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
113.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
106.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
85.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
83.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
82.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
69.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
64.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
62.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
57.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
42.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
40.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
38.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
37.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
35.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
30.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
29.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
27.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
24.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
24.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
23.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
22.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
19.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
17.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
11.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
11.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
9.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
7.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
7.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
5.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
2.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC1A5 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
303.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
171.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
167.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
147.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
125.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
120.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
119.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
116.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
111.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
110.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
108.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
103.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
99.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
97.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
97.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
93.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
91.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
90.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
88.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
86.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
85.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
85.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
85.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
85.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
84.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
83.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
82.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
81.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
81.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
81.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
81.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
81.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
79.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
79.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
78.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
77.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
77.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
73.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
73.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
73.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
73.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
73.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
72.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
72.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
71.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
71.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
70.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
70.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
70.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
69.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
69.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
69.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
68.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
68.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
68.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
67.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
67.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
67.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
67.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
66.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
66.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
66.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
65.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
65.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
64.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
64.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
64.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
63.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
62.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
62.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
61.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
61.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
61.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
60.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
60.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
60.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
60.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
60.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
60.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
60.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
60.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
60.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
60.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
59.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
59.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
59.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
59.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
59.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
59.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
58.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
58.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
58.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
57.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
57.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
57.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
57.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
57.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
57.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
57.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
56.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
56.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
56.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
56.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
56.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
56.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
56.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
56.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
55.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
55.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
55.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
55.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
55.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
54.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
54.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
54.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
54.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
54.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
53.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
53.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
53.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
52.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
52.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
52.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
52.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
52.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
52.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
52.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
52.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
52.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
52.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
51.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
51.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
51.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
51.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
51.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
51.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
51.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
50.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
50.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
50.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
50.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
50.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
50.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
49.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
49.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
49.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
49.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
49.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
49.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
49.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
48.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
48.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
48.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
48.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
47.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
47.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
47.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
47.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
47.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
46.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
46.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
46.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
46.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
45.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
45.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
45.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
45.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
45.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
45.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
45.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
45.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
44.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
44.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
44.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
44.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
44.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
44.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
44.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
44.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
44.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
44.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
44.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
44.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
43.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
43.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
43.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
43.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
43.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
43.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
43.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
43.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
43.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
43.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
43.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
43.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
43.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
43.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
43.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
43.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
43.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
42.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
42.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
42.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
42.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
42.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
42.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
42.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
41.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
41.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
41.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
41.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
41.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
41.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
41.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
41.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
41.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
41.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
41.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
41.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
41.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
41.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
41.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
41.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
41.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
41.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
41.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
41.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
41.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
41.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
41.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
41.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
40.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
40.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
40.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
40.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
40.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
40.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
40.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
40.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
40.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
40.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
40.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
40.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
40.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
40.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
40.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
40.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
39.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
39.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
39.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
39.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
39.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
39.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
39.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
39.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
38.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
38.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
38.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
38.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
38.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
38.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
38.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
38.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
38.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
38.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
38.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
38.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
37.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
37.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
37.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
37.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
37.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
37.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
37.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
37.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
37.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
37.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
37.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
37.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
36.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
36.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
36.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
36.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
36.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
36.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
36.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
36.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
36.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
36.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
36.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
36.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
36.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
36.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
36.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
35.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
35.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
35.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
35.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
35.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
35.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
35.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
35.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
35.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
35.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
35.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
35.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
35.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
34.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
34.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
34.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
34.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
34.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
34.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
34.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
34.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
34.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
34.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
34.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
34.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
34.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
34.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
34.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
34.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
34.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
34.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
34.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
34.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
34.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
34.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
33.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
33.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
33.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
33.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
33.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
33.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
33.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
33.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
32.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
32.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
32.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
32.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
32.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
32.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
32.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
32.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
32.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
32.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
32.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
32.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
32.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
32.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
32.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
32.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
32.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
32.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
32.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
31.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
31.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
31.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
31.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
31.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
31.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
31.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
31.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
31.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
31.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
31.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
31.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
31.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
31.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
30.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
30.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
30.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
30.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
30.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
30.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
30.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
30.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
30.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
30.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
29.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
29.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
29.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
29.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
29.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
29.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
29.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
29.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
29.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
29.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
28.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
28.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
28.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
28.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
28.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
28.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
28.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
28.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
28.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
27.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
27.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
27.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
27.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
26.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
26.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
26.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
26.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
26.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
26.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
26.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
26.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
26.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
25.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
25.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
25.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
25.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
25.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
25.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
25.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
24.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
24.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
24.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
24.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
24.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
24.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
23.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
23.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
23.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
23.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
22.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
22.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
22.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
21.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
21.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
21.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
21.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
21.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
20.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
20.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
19.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
19.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
19.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
19.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
18.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
15.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
15.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
14.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
7.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
5.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC1A5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
122.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
97.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
94.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
79.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
72.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
71.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
70.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
60.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
60.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
55.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
53.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
52.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
52.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
52.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
50.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
48.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
48.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
47.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
46.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
46.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
46.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
43.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
42.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
40.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
40.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
38.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
38.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
38.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
37.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
37.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
37.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
36.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
36.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
35.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
35.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
34.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
34.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
34.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
34.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
33.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
32.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
32.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
32.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
31.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
31.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
30.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
30.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
29.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
29.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
29.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
28.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
28.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
28.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
28.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
27.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
27.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
25.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
25.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
25.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
24.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
24.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
23.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
22.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
21.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
21.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
20.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
20.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
20.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
20.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
19.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
19.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
16.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC1A5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
335.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
298.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
276.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
266.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
245.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
242.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
238.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
234.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
221.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
208.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
182.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
169.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
166.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
165.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
151.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
150.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
145.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
131.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
131.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
129.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
128.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
128.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
126.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
124.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
121.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
117.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
113.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
112.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
105.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
104.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
104.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
101.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
97.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
96.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
96.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
94.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
94.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
92.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
91.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
91.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
90.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
89.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
89.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
89.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
85.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
84.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
84.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
82.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
81.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
81.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
81.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
81.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
79.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
79.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
79.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
78.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
78.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
77.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
76.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
75.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
75.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
74.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
74.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
73.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
72.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
71.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
71.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
71.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
71.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
70.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
69.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
68.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
67.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
67.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
66.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
66.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
66.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
65.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
64.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
63.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
63.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
62.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
62.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
62.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
62.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
61.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
61.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
60.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
60.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
60.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
59.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
59.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
58.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
58.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
57.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
57.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
56.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
55.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
55.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
55.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
55.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
54.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
54.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
54.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
53.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
52.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
52.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
51.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
50.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
50.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
50.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
50.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
50.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
50.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
49.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
48.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
48.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
48.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
48.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
48.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
47.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
45.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
45.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
45.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
45.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
44.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
44.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
44.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
44.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
43.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
43.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
43.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
43.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
42.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
42.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
42.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
42.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
42.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
42.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
41.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
41.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
41.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
40.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
40.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
40.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
39.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
39.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
39.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
39.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
39.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
38.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
38.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
38.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
36.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
36.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
35.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
35.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
35.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
35.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
35.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
35.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
35.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
34.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
34.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
34.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
34.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
34.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
33.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
33.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
33.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
32.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
32.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
31.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
31.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
31.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
30.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
30.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
30.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
29.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
29.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
29.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
29.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
29.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
29.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
29.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
28.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
28.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
28.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
27.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
27.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
26.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
26.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
25.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
25.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
25.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
25.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
25.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
25.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
24.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
24.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
24.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
24.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
23.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
22.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
22.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
21.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
21.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
20.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
20.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
20.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
20.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
20.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
20.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
19.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
18.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
17.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
17.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
16.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
16.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
15.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
14.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
14.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
14.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
12.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
11.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
11.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
11.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
10.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
7.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
7.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
6.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
6.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
6.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
6.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
4.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
2.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0081880003
Tumor
1.2
CPT0076330003
Tumor
1.1
CPT0001260009
Tumor
1.0
CPT0000790001
Normal
0.9
CPT0088920001
Normal
0.9
CPT0023350003
Tumor
0.7
CPT0065450001
Normal
0.7
CPT0012180003
Tumor
0.7
CPT0006730001
Normal
0.7
CPT0023710001
Normal
0.7
CPT0001230001
Normal
0.7
CPT0014350001
Normal
0.6
CPT0023360001
Normal
0.6
CPT0077140001
Normal
0.6
CPT0012770003
Normal
0.6
CPT0089040001
Normal
0.6
CPT0007470001
Normal
0.6
CPT0026420001
Normal
0.6
CPT0078930003
Tumor
0.6
CPT0092800003
Normal
0.5
CPT0001340003
Tumor
0.5
CPT0092310003
Normal
0.5
CPT0079000001
Normal
0.5
CPT0087050003
Normal
0.5
CPT0078840001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0089480003
Normal
0.5
CPT0089460004
Tumor
0.5
CPT0001350001
Normal
0.5
CPT0013790003
Normal
0.4
CPT0012550003
Tumor
0.4
CPT0088780001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0078800003
Tumor
0.4
CPT0010170001
Normal
0.4
CPT0006950001
Normal
0.4
CPT0078530001
Normal
0.4
CPT0075130003
Tumor
0.4
CPT0079430001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0086830003
Normal
0.3
CPT0020130001
Normal
0.3
CPT0086820003
Tumor
0.3
CPT0078670001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0081620001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0002350011
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0009080003
Normal
0.3
CPT0025050003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0012570003
Normal
0.2
CPT0017450001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0078940001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0082010001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0014130001
Normal
0.1
CPT0001270001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0001550001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0076350001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0014470001
Normal
-0.2
CPT0092290003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0012900004
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0007860003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0021240003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0024680001
Normal
-0.3
CPT0066480003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0079300001
Normal
-0.4
CPT0025580004
Tumor
-0.4
CPT0010120001
Normal
-0.4
CPT0079270003
Tumor
-0.4
CPT0024670003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0075570001
Normal
-0.4
CPT0087040003
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0079410003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0069000003
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0077310003
Tumor
-0.5
CPT0019130003
Tumor
-0.5
CPT0012370003
Tumor
-0.5
CPT0069160003
Tumor
-0.5
CPT0014450004
Tumor
-0.6
CPT0071150004
Tumor
-0.6
CPT0001540009
Tumor
-0.6
CPT0078990003
Tumor
-0.6
CPT0086870003
Tumor
-0.6
CPT0066470004
Tumor
-0.6
CPT0006900003
Tumor
-0.6
CPT0010160003
Tumor
-0.6
CPT0089020003
Tumor
-0.6
CPT0088900003
Tumor
-0.6
CPT0000640003
Tumor
-0.6
CPT0011240003
Tumor
-0.7
CPT0017410003
Tumor
-0.7
CPT0079380003
Tumor
-0.7
CPT0015910003
Tumor
-0.7
CPT0092190003
Normal
-0.8
CPT0081990003
Tumor
-0.8
CPT0006440003
Tumor
-0.8
CPT0065690003
Tumor
-0.8
CPT0065870003
Tumor
-0.8
CPT0078510003
Tumor
-0.8
CPT0084560003
Tumor
-0.8
CPT0075720003
Tumor
-0.8
CPT0014370004
Tumor
-0.9
CPT0079230003
Tumor
-0.9
CPT0025350003
Tumor
-0.9
CPT0088480003
Tumor
-1.0
CPT0085670003
Tumor
-1.0
CPT0079180003
Tumor
-1.0
CPT0025290003
Tumor
-1.0
CPT0065750003
Tumor
-1.1
CPT0079510001
Normal
-1.1
CPT0025230003
Tumor
-1.1
CPT0079480003
Tumor
-1.1
CPT0086030003
Tumor
-1.1
CPT0088970003
Tumor
-1.2
CPT0015730003
Tumor
-1.3
CPT0000870016
Tumor
-1.3
CPT0065930003
Tumor
-1.4
CPT0078660003
Tumor
-1.5
CPT0011410003
Tumor
-1.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
