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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBCB is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
149.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
135.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
134.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
132.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
119.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
117.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
111.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
107.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
101.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
100.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
99.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
89.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
87.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
87.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
87.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
85.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
83.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
83.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
82.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
77.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
76.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
74.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
74.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
73.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
73.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
69.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
67.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
66.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
65.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
63.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
63.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
62.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
61.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
60.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
58.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
57.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
57.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
56.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
55.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
55.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
55.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
55.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
54.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
54.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
53.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
53.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
53.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
53.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
52.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
52.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
49.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
48.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
45.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
44.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
44.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
43.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
42.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
41.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
39.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
39.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
37.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
34.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
24.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBCB is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
70.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
215.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
168.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
162.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
162.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
150.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
142.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
136.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
132.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
128.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
127.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
125.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
125.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
120.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
117.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
116.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
114.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
112.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
111.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
107.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
106.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
106.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
105.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
105.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
105.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
105.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
104.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
104.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
103.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
103.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
103.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
102.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
102.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
102.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
101.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
101.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
100.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
100.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
100.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
100.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
100.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
99.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
98.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
98.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
98.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
98.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
98.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
97.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
97.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
97.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
97.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
96.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
96.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
96.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
96.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
96.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
94.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
94.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
94.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
94.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
94.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
94.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
94.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
94.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
93.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
93.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
93.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
93.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
93.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
93.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
92.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
91.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
91.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
91.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
91.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
91.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
91.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
90.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
90.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
90.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
90.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
90.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
90.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
89.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
89.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
89.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
89.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
89.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
89.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
89.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
88.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
88.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
88.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
88.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
88.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
87.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
87.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
87.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
87.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
86.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
86.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
86.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
85.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
85.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
85.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
85.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
85.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
85.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
85.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
85.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
84.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
84.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
84.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
83.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
83.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
83.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
83.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
83.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
83.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
83.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
83.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
83.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
83.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
82.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
82.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
82.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
82.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
82.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
82.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
82.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
82.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
82.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
82.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
81.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
81.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
81.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
80.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
80.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
80.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
80.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
80.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
80.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
80.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
80.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
80.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
80.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
80.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
79.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
79.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
79.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
79.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
79.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
79.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
79.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
79.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
78.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
78.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
78.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
78.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
78.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
78.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
77.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
77.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
77.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
77.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
77.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
77.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
77.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
77.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
77.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
76.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
76.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
76.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
76.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
76.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
76.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
76.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
75.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
75.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
75.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
75.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
75.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
75.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
75.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
75.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
75.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
75.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
75.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
75.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
74.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
74.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
74.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
74.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
74.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
74.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
74.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
74.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
74.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
74.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
73.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
73.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
73.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
73.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
73.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
73.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
73.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
73.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
73.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
73.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
72.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
72.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
72.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
72.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
72.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
72.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
72.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
72.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
72.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
72.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
72.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
72.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
72.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
72.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
71.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
71.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
71.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
71.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
71.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
71.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
71.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
70.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
70.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
70.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
70.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
70.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
70.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
70.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
69.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
69.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
69.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
69.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
69.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
69.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
69.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
69.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
69.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
69.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
69.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
69.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
68.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
68.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
68.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
68.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
68.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
68.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
68.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
68.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
68.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
68.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
68.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
67.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
67.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
67.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
67.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
67.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
67.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
67.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
67.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
67.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
67.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
67.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
66.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
66.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
66.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
66.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
66.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
66.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
66.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
66.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
66.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
66.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
65.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
65.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
65.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
65.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
65.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
65.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
65.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
65.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
65.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
65.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
65.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
64.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
64.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
64.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
64.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
64.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
64.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
64.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
64.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
64.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
64.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
64.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
64.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
64.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
63.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
63.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
63.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
63.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
63.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
63.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
63.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
63.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
63.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
63.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
63.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
63.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
63.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
62.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
62.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
62.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
62.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
62.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
62.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
62.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
62.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
62.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
62.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
62.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
61.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
61.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
61.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
61.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
61.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
61.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
61.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
61.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
61.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
60.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
60.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
60.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
60.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
60.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
60.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
60.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
60.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
60.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
60.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
60.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
60.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
60.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
60.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
59.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
59.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
59.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
59.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
59.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
59.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
59.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
58.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
58.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
58.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
58.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
58.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
58.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
58.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
58.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
58.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
58.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
58.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
58.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
58.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
58.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
58.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
57.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
57.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
57.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
57.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
57.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
57.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
57.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
57.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
57.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
57.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
57.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
57.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
57.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
57.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
56.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
56.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
56.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
56.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
56.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
56.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
56.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
56.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
56.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
56.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
56.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
56.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
55.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
55.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
55.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
55.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
55.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
55.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
55.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
55.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
55.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
55.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
55.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
54.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
54.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
54.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
54.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
54.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
54.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
53.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
53.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
53.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
53.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
53.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
53.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
53.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
53.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
53.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
53.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
52.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
52.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
52.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
52.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
52.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
52.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
52.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
52.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
52.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
52.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
51.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
51.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
51.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
51.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
51.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
50.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
50.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
50.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
50.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
50.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
50.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
50.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
50.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
50.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
50.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
50.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
50.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
50.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
50.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
49.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
49.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
49.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
49.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
49.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
49.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
49.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
49.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
49.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
49.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
49.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
48.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
48.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
48.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
48.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
48.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
47.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
47.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
47.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
47.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
46.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
46.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
46.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
46.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
45.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
45.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
45.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
45.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
45.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
45.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
44.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
44.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
44.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
43.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
43.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
43.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
42.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
42.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
42.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
42.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
41.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
41.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
41.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
41.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
41.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
40.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
38.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
37.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
37.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
37.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
36.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
35.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
35.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
35.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
34.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
33.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
30.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
30.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
29.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
28.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
26.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
26.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
18.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBCB is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
70.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
425.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
123.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
117.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
116.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
106.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
104.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
98.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
95.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
92.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
90.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
87.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
86.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
85.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
85.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
83.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
83.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
82.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
80.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
80.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
79.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
79.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
78.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
78.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
78.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
77.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
76.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
76.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
76.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
71.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
70.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
70.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
70.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
69.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
69.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
69.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
69.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
68.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
68.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
67.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
67.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
66.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
66.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
66.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
65.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
65.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
64.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
64.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
64.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
64.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
63.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
63.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
62.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
62.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
61.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
61.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
60.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
60.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
60.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
59.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
59.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
59.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
59.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
58.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
57.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
57.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
57.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
57.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
56.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
55.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
55.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
55.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
55.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
55.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
55.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
55.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
55.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
54.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
54.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
53.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
53.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
53.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
53.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
52.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
51.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
50.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
50.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
50.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
49.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
48.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
48.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
48.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
48.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
47.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
47.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
46.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
44.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
43.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
42.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBCB is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
98.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
286.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
243.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
241.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
229.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
208.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
204.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
194.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
188.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
183.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
174.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
172.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
170.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
167.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
166.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
166.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
165.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
164.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
164.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
162.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
162.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
161.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
159.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
157.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
157.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
156.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
156.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
154.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
153.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
151.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
148.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
147.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
146.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
146.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
146.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
145.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
142.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
141.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
140.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
139.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
138.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
137.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
133.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
132.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
132.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
131.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
129.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
129.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
128.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
127.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
127.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
126.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
126.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
126.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
122.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
121.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
120.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
120.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
119.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
118.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
118.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
118.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
117.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
117.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
116.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
116.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
116.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
115.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
115.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
114.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
113.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
113.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
112.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
111.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
111.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
111.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
110.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
110.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
110.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
110.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
110.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
108.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
108.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
108.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
107.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
107.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
106.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
106.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
106.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
105.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
105.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
105.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
105.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
105.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
105.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
105.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
104.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
103.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
103.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
103.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
103.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
103.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
102.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
102.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
102.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
102.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
102.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
101.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
99.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
99.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
99.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
99.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
99.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
98.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
98.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
98.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
98.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
97.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
97.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
97.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
97.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
97.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
97.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
96.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
96.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
96.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
96.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
95.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
95.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
95.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
94.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
94.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
94.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
93.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
93.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
93.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
93.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
93.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
93.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
92.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
92.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
92.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
92.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
91.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
90.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
90.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
90.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
90.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
90.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
89.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
89.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
89.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
88.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
88.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
88.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
87.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
87.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
86.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
86.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
86.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
86.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
86.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
85.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
85.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
85.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
84.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
84.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
84.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
84.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
83.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
83.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
83.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
83.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
83.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
82.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
82.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
82.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
82.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
82.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
81.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
81.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
81.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
80.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
80.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
80.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
80.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
80.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
80.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
79.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
79.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
78.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
78.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
78.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
78.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
78.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
77.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
77.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
76.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
76.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
76.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
76.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
76.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
75.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
75.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
75.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
74.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
74.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
73.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
73.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
73.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
73.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
72.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
71.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
71.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
70.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
70.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
70.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
70.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
70.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
69.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
69.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
69.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
69.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
69.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
68.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
68.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
68.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
68.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
68.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
67.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
67.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
66.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
66.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
66.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
66.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
65.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
65.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
65.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
65.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
65.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
64.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
64.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
64.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
63.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
63.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
63.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
63.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
63.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
62.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
62.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
62.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
62.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
61.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
61.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
61.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
60.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
59.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
58.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
58.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
57.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
57.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
57.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
56.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
56.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
56.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
56.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
56.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
56.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
55.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
54.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
54.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
54.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
53.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
53.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
52.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
49.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
49.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
46.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
45.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
45.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
44.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
42.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
38.2
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.3
CPT0084560003
Tumor
0.9
CPT0006440003
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0012550003
Tumor
0.7
CPT0011240003
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0069000003
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0014450004
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0063630003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0012180003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0025290003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0065430003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0006630003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0001350001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0086030003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0015730003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0088780001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0023690003
Tumor
-0.3
CPT0078670001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0011410003
Tumor
-0.4
CPT0023710001
Normal
-0.4
CPT0001500009
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
