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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
151.3
nTPM
GTEx:
151.3
nTPM
FANTOM5:
349.7
Scaled Tags Per Million
Pig:
275.6
nTPM
Mouse:
674.5
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
151.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 151.3
Samples: 105
Max nTPM: 474.4
Min nTPM: 42.7
Std nTPM: 73.6
Median nTPM:
218_1
71 years, female
474.4
386_1
76 years, male
366.7
379_1
60 years, male
329.7
322_1
76 years, male
320.6
6_1
73 years, female
292.9
321_1
62 years, female
284.4
375_1
74 years, female
282.3
173_1
67 years, male
278.0
317_1
60 years, male
272.9
295_1
61 years, female
250.8
316_1
62 years, male
250.7
307_1
66 years, female
245.0
351_1
91 years, male
229.7
447_1
81 years, male
222.4
347_1
72 years, male
219.2
318_1
68 years, male
217.1
377_1
82 years, female
213.7
2_1
77 years, female
204.3
319_1
81 years, male
203.1
145_1
84 years, male
202.8
506_1
65 years, male
199.0
350_1
84 years, female
195.8
348_1
84 years, male
193.9
163_1
78 years, male
193.8
452_1
88 years, female
193.0
384_1
83 years, male
190.8
291_1
76 years, male
189.0
243_1
75 years, male
184.4
353_1
82 years, female
184.4
320_1
89 years, female
177.0
177_1
74 years, male
176.4
17_1
71 years, male
174.5
120_1
70 years, female
171.5
425_1
59 years, female
171.5
354_1
81 years, female
169.9
41_1
94 years, female
169.8
349_1
83 years, male
163.8
376_1
75 years, female
163.4
293_1
68 years, female
162.9
311_1
78 years, male
159.5
4_1
88 years, female
156.5
237_1
82 years, male
151.7
352_1
62 years, male
151.0
335_1
73 years, female
150.2
35_1
74 years, female
150.1
518_1
75 years, female
150.1
172_1
72 years, female
142.3
139_1
64 years, female
141.8
288_1
66 years, female
141.3
355_1
70 years, female
134.5
405_1
91 years, male
134.1
389_1
86 years, female
133.0
324_1
76 years, male
132.3
292_1
71 years, male
131.6
356_1
87 years, female
131.2
246_1
77 years, male
129.1
314_1
67 years, male
127.7
254_1
77 years, female
127.5
406_1
79 years, male
126.8
404_1
82 years, female
126.1
480_1
63 years, male
125.3
308_1
70 years, female
124.9
526_1
61 years, male
123.1
18_1
88 years, male
122.4
264_1
73 years, female
121.7
495_1
57 years, female
121.2
115_1
83 years, male
121.0
153_1
70 years, female
120.6
286_1
68 years, female
120.1
42_1
85 years, male
117.8
503_1
68 years, male
117.6
99_1
64 years, male
117.5
517_1
88 years, male
116.6
117_1
61 years, male
115.2
468_1
89 years, male
114.9
189_1
76 years, male
114.1
137_1
83 years, male
114.0
126_1
63 years, male
113.7
265_1
87 years, male
112.1
229_1
69 years, female
109.3
251_1
78 years, male
105.7
394_1
75 years, female
103.5
315_1
62 years, female
102.2
396_1
62 years, male
97.7
313_1
79 years, female
96.1
43_1
64 years, female
95.1
266_1
85 years, male
87.8
501_1
88 years, male
80.3
9_1
66 years, female
78.7
142_1
61 years, female
77.2
490_1
67 years, female
77.1
119_1
70 years, female
75.8
499_1
55 years, female
75.2
491_1
89 years, female
68.5
81_1
67 years, male
68.3
217_1
76 years, male
64.9
109_1
81 years, female
64.1
32_1
67 years, male
58.1
89_1
63 years, male
52.0
415_1
77 years, female
50.0
466_1
57 years, female
49.4
162_1
79 years, female
48.7
414_1
84 years, female
46.6
413_1
59 years, female
45.5
149_1
88 years, male
42.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.