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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VRK3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
71.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
52.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
49.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
45.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
43.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
41.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
41.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
38.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
37.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
37.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
36.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
36.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
35.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
34.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
34.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
32.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
31.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
30.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
30.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
27.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
26.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
26.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
26.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
25.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
24.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
24.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
23.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
23.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
23.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
23.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
21.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
21.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
20.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
20.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
20.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
20.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
19.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
18.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
17.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
16.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
15.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
14.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
11.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
9.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VRK3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
52.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
51.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
49.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
46.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
43.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
42.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
42.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
42.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
42.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
42.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
41.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
41.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
41.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
41.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
40.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
40.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
40.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
40.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
40.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
40.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
40.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
40.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
40.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
39.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
39.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
39.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
39.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
39.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
39.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
39.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
39.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
38.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
38.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
38.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
38.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
38.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
38.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
38.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
38.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
38.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
38.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
37.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
37.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
37.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
37.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
37.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
37.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
37.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
36.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
36.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
36.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
36.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
36.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
36.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
35.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
35.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
35.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
35.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
35.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
35.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
35.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
35.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
35.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
35.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
34.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
34.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
34.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
34.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
34.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
34.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
34.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
34.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
34.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
34.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
34.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
34.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
33.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
33.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
33.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
33.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
33.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
33.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
33.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
33.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
33.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
33.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
33.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
33.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
32.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
32.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
32.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
32.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
32.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
32.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
32.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
32.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
32.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
32.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
31.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
31.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
31.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
31.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
31.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
31.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
31.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
31.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
31.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
31.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
30.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
30.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
30.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
30.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
30.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
30.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
30.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
30.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
30.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
30.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
30.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
30.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
30.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
30.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
29.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
29.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
29.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
29.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
29.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
29.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
29.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
29.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
28.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
28.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
28.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
28.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
28.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
28.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
28.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
28.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
28.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
28.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
28.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
28.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
28.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
28.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
28.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
28.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
28.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
28.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
28.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
27.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
27.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
27.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
27.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
27.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
27.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
27.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
27.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
27.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
27.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
27.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
27.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
27.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
27.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
27.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
27.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
27.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
27.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
27.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
27.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
27.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
26.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
26.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
26.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
26.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
26.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
26.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
26.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
26.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
26.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
26.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
26.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
26.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
26.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
26.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
25.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
25.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
25.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
25.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
25.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
25.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
25.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
25.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
25.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
25.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
25.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
25.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
25.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
25.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
25.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
25.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
25.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
24.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
24.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
24.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
24.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
24.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
24.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
24.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
24.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
24.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
24.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
24.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
24.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
24.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
24.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
24.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
24.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
24.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
24.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
24.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
24.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
23.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
23.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
23.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
23.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
23.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
23.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
23.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
23.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
23.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
23.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
23.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
23.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
23.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
23.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
22.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
22.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
22.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
22.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
22.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
22.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
22.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
22.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
22.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
22.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
22.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
22.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
22.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
22.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
22.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
22.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
22.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
22.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
22.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
22.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
22.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
21.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
21.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
21.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
21.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
21.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
21.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
21.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
21.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
21.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
21.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
21.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
20.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
20.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
20.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
20.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
20.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
20.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
20.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
19.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
19.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
19.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
19.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
19.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
19.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
18.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
18.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
18.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
18.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
17.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
17.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
17.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
17.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
17.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
17.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
17.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
17.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
16.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
16.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
16.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
15.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
15.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
15.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
15.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
14.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
13.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
13.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
13.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VRK3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
45.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
43.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
43.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
42.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
42.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
41.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
37.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
37.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
37.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
36.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
36.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
35.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
35.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
35.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
35.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
35.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
34.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
34.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
32.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
32.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
32.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
31.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
31.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
30.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
30.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
30.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
30.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
29.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
29.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
29.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
29.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
28.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
28.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
27.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
27.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
26.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
26.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
26.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
26.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
25.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
25.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
24.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
24.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
23.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
23.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
23.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
22.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
22.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
21.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
19.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
19.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
19.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
15.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VRK3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
85.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
82.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
76.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
75.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
74.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
70.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
65.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
62.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
61.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
60.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
59.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
59.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
57.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
57.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
55.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
55.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
53.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
53.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
53.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
51.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
51.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
50.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
48.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
47.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
46.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
46.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
45.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
44.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
44.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
44.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
44.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
43.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
43.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
43.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
42.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
42.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
42.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
40.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
40.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
40.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
39.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
39.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
39.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
39.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
39.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
38.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
38.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
38.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
38.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
37.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
37.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
37.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
37.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
36.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
36.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
36.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
35.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
35.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
35.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
35.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
35.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
35.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
35.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
35.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
35.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
35.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
34.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
34.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
34.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
34.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
34.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
33.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
33.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
33.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
33.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
33.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
33.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
33.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
33.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
32.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
32.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
32.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
32.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
32.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
32.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
32.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
32.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
32.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
31.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
31.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
31.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
31.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
31.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
31.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
31.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
31.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
31.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
31.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
30.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
30.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
30.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
30.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
30.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
30.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
30.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
30.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
29.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
29.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
29.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
29.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
29.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
29.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
29.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
29.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
29.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
28.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
28.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
28.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
28.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
28.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
28.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
28.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
28.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
27.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
27.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
27.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
27.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
27.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
27.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
26.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
26.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
26.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
26.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
26.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
26.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
26.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
26.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
26.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
26.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
26.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
26.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
26.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
25.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
25.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
25.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
25.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
25.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
25.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
25.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
25.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
25.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
25.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
25.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
24.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
24.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
24.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
24.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
24.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
24.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
24.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
24.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
24.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
24.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
24.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
23.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
23.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
23.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
23.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
23.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
23.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
23.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
23.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
23.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
22.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
22.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
22.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
22.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
22.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
22.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
22.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
22.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
22.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
22.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
22.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
21.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
21.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
21.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
21.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
21.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
21.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
20.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
20.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
20.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
19.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
19.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
19.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
19.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
19.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
19.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
19.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
19.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
18.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
18.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
17.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
17.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
15.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
15.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
13.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
10.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
7.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
0.8
CPT0012900004
Tumor
0.8
CPT0076350001
Normal
0.7
CPT0001350001
Normal
0.6
CPT0092740003
Normal
0.5
CPT0077140001
Normal
0.5
CPT0079430001
Normal
0.5
CPT0065810003
Tumor
0.5
CPT0012770003
Normal
0.4
CPT0089480003
Normal
0.4
CPT0007320003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0025060001
Normal
0.4
CPT0078990003
Tumor
0.4
CPT0086830003
Normal
0.4
CPT0088920001
Normal
0.4
CPT0075570001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0002270011
Tumor
0.3
CPT0010170001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0006730001
Normal
0.3
CPT0000790001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0001190001
Normal
0.3
CPT0025290003
Tumor
0.3
CPT0078840001
Normal
0.3
CPT0078800003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0026420001
Normal
0.3
CPT0065450001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0000890001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0081620001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0078930003
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0079000001
Normal
0.2
CPT0025880003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0020120003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0013790003
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0065820001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0086890003
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0000780007
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0089020003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0079380003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0092730003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0017410003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0084590001
Normal
-0.3
CPT0009000003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0012670003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0086950003
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0092310003
Normal
-0.4
CPT0077110003
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0081600003
Tumor
-0.4
CPT0075720003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0015910003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0009060003
Tumor
-0.5
CPT0088550004
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0084560003
Tumor
-0.6
CPT0012080003
Tumor
-0.7
CPT0081880003
Tumor
-0.7
CPT0085670003
Tumor
-0.8
CPT0088630003
Tumor
-0.9
CPT0000640003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
