HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:35.7 nTPM
HPA Brain:59.1 nTPM
GTEx:35.7 nTPM
FANTOM5:39.6 Scaled Tags Per Million
Pig:28.3 nTPM
Mouse:1.4 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068119
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 59.1
Sample id Sample description nTPM
Hippocampus
nTPM: 55.6
2621 Female, age 67, right hemisphere 65.4
2529 Female, age 94, left hemisphere 60.6
2148 Female, age 91, left hemisphere 53.5
1855 Male, age 76, left hemisphere 53.3
1911 Female, age 85, right hemisphere 52.3
1898 Male, age 80, left hemisphere 48.3
Dentate gyrus
nTPM: 53.5
2530 Female, age 94, left hemisphere 65.9
2531 Female, age 67, both hemispheres 60.3
2528 Male, age 74, both hemispheres 52.0
2246 Female, age 85, both hemispheres 51.4
2010 Male, age 76, both hemispheres 48.1
1927 Female, age 91, both hemispheres 43.5
Entorhinal gyrus
nTPM: 59.1
2613 Female, age 94, left hemisphere 68.3
2764 Male, age 80, right hemisphere 63.6
2117 Female, age 91, right hemisphere 59.8
2686 Male, age 75, right hemisphere 56.9
1787 Male, age 76, left hemisphere 53.6
1938 Female, age 85, left hemisphere 52.6
Hippocampus, CA1
nTPM: 54.1
2749 Male, age 80, left hemisphere 67.6
1873 Female, age 85, both hemispheres 53.2
2527 Male, age 74, both hemispheres 52.7
2082 Female, age 91, right hemisphere 50.7
2045 Male, age 76, both hemispheres 46.4
Hippocampus, CA2
nTPM: 51.5
1963 Male, age 80, left hemisphere 57.5
2437 Female, age 94, left hemisphere 53.5
2113 Female, age 91, right hemisphere 52.3
2249 Male, age 74, both hemispheres 51.0
1892 Male, age 76, both hemispheres 50.1
1940 Female, age 85, left hemisphere 44.3
Hippocampus, CA3
nTPM: 57.2
2620 Female, age 94, left hemisphere 71.0
2861 Female, age 67, both hemispheres 62.9
2137 Male, age 80, left hemisphere 62.1
1867 Male, age 76, both hemispheres 53.9
1891 Female, age 85, both hemispheres 47.4
2436 Male, age 74, both hemispheres 45.8
Parahippocampal cortex
nTPM: 53.3
2532 Female, age 72, left hemisphere 60.2
2692 Male, age 74, both hemispheres 59.1
2622 Female, age 67, right hemisphere 58.7
2245 Female, age 91, both hemispheres 58.4
1990 Female, age 91, right hemisphere 54.4
1933 Female, age 85, both hemispheres 50.2
2693 Female, age 94, both hemispheres 49.8
1850 Male, age 80, both hemispheres 48.4
2250 Female, age 67, right hemisphere 47.4
2018 Male, age 76, both hemispheres 46.7
Perirhinal gyrus
nTPM: 51.0
1794 Male, age 80, right hemisphere 56.8
1847 Female, age 91, left hemisphere 51.5
1841 Female, age 85, right hemisphere 50.2
2848 Male, age 76, right hemisphere 49.3
2521 Female, age 94, right hemisphere 47.0
Subiculum
nTPM: 54.2
2619 Male, age 74, both hemispheres 63.4
2042 Male, age 76, both hemispheres 56.2
1901 Male, age 80, both hemispheres 53.7
1977 Female, age 85, both hemispheres 53.4
2438 Female, age 94, left hemisphere 52.0
2729 Female, age 91, right hemisphere 46.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 35.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.7
Samples: 197

Max nTPM: 71.3
Min nTPM: 8.6
Std nTPM: 8.5
Median nTPM: 35.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 71.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 57.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 57.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 54.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 54.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 52.6
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 51.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 51.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 50.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 49.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 49.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 39.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.6
FF:10153-102I9 76 years, female 48.2
FF:10169-103B7 60 years, female 31.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.3
Pig sample Sample description nTPM
Subiculum
nTPM: 25.1
Samples: 4

Max nTPM: 31.0
Min nTPM: 20.7
Sample A Female 31.0
Sample B Female 23.5
Sample C Male 25.2
Sample D Male 20.7
Dorsal hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 34.6
Min nTPM: 20.1
Sample A Female 34.6
Sample B Female 27.7
Sample C Male 28.2
Sample D Male 20.1
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 24.5
Min nTPM: 20.1
Sample A Female 24.5
Sample B Female 21.2
Sample C Male 23.8
Sample D Male 20.1
Ventral hippocampus
nTPM: 28.3
Samples: 4

Max nTPM: 36.6
Min nTPM: 21.1
Sample A Female 27.9
Sample B Female 21.1
Sample C Male 36.6
Sample D Male 27.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.4
Samples: 4

Max nTPM: 2.6
Min nTPM: 0.7
Sample A Male 1.2
Sample B Male 0.7
Sample C Female 1.0
Sample D Female 2.6
Hippocampal formation
nTPM: 1.2
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.0
Sample A Male 1.6
Sample B Male 1.2
Sample C Female 1.0
Sample D Female 1.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
634454 Antisense, RP_040914_01_A04, Mouse strain C57BL/6J (56 days, male) 1.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org