We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX10 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
98.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
78.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
72.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
70.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
63.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
61.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
58.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
52.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
42.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
39.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
39.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
39.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
37.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
37.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
37.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
35.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
34.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
31.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
30.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
28.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
26.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
26.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
26.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
25.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
24.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
23.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
22.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
22.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
21.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
21.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
21.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
19.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
19.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
18.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
18.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
18.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
17.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
17.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
16.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
15.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
15.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
15.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
14.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
8.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX10 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
95.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
71.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
69.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
69.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
68.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
64.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
63.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
61.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
58.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
57.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
56.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
55.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
55.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
54.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
53.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
53.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
53.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
51.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
51.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
51.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
51.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
50.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
50.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
50.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
49.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
49.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
49.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
49.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
48.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
48.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
48.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
48.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
47.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
47.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
47.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
47.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
47.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
47.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
47.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
46.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
46.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
46.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
45.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
45.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
45.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
45.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
45.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
45.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
44.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
44.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
44.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
44.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
44.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
44.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
44.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
44.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
44.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
44.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
44.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
44.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
43.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
43.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
43.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
43.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
43.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
43.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
43.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
43.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
43.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
43.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
43.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
43.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
43.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
42.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
42.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
42.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
42.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
42.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
42.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
42.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
42.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
42.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
42.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
42.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
42.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
42.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
42.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
42.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
41.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
41.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
41.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
41.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
41.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
41.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
41.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
41.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
41.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
41.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
41.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
41.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
41.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
41.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
41.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
41.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
41.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
41.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
41.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
41.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
41.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
40.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
40.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
40.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
40.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
40.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
40.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
40.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
39.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
39.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
39.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
39.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
39.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
39.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
39.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
39.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
39.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
39.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
39.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
39.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
39.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
39.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
39.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
39.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
39.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
39.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
39.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
39.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
38.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
38.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
38.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
38.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
38.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
38.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
38.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
38.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
38.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
38.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
38.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
38.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
38.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
38.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
38.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
38.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
38.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
38.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
38.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
38.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
38.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
38.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
37.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
37.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
37.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
37.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
37.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
37.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
37.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
37.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
37.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
37.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
37.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
37.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
37.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
37.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
37.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
36.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
36.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
36.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
36.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
36.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
36.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
36.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
36.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
36.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
36.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
36.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
36.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
36.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
36.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
36.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
36.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
36.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
36.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
36.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
36.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
36.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
36.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
36.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
36.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
36.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
35.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
35.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
35.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
35.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
35.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
35.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
35.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
35.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
35.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
35.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
35.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
35.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
35.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
35.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
35.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
35.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
35.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
35.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
34.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
34.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
34.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
34.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
34.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
34.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
34.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
34.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
34.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
34.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
34.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
34.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
34.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
34.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
34.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
34.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
34.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
34.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
34.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
34.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
34.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
34.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
33.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
33.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
33.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
33.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
33.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
33.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
33.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
33.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
33.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
33.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
33.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
33.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
33.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
33.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
33.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
33.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
33.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
33.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
33.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
33.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
33.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
33.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
33.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
33.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
33.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
33.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
33.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
32.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
32.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
32.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
32.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
32.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
32.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
32.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
32.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
32.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
32.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
32.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
32.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
32.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
32.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
32.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
32.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
32.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
32.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
32.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
32.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
32.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
32.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
32.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
32.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
32.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
32.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
32.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
31.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
31.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
31.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
31.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
31.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
31.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
31.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
31.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
31.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
31.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
31.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
31.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
31.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
31.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
31.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
31.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
31.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
31.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
31.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
31.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
31.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
30.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
30.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
30.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
30.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
30.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
30.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
30.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
30.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
30.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
30.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
30.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
30.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
30.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
30.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
30.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
30.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
30.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
30.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
30.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
30.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
30.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
29.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
29.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
29.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
29.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
29.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
29.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
29.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
29.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
29.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
29.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
29.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
29.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
29.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
29.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
29.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
29.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
28.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
28.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
28.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
28.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
28.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
28.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
28.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
28.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
28.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
28.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
28.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
28.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
28.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
28.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
28.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
27.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
27.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
27.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
27.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
27.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
27.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
27.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
27.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
27.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
27.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
27.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
27.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
27.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
26.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
26.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
26.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
26.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
26.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
26.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
26.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
26.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
26.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
26.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
26.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
26.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
26.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
26.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
26.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
26.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
26.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
25.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
25.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
25.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
25.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
25.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
25.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
25.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
25.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
24.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
24.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
24.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
24.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
24.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
24.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
24.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
24.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
24.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
23.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
23.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
23.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
23.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
23.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
22.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
21.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
21.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
21.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
20.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
20.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
18.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
17.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
16.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
16.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
15.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
13.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
11.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX10 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
70.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
64.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
61.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
59.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
58.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
58.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
57.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
57.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
56.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
56.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
56.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
55.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
54.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
53.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
53.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
52.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
52.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
51.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
51.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
51.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
50.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
50.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
49.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
49.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
48.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
48.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
48.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
47.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
46.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
46.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
45.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
45.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
45.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
45.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
45.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
45.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
45.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
44.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
43.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
43.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
43.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
43.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
43.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
43.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
43.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
42.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
42.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
42.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
41.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
40.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
40.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
40.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
40.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
40.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
40.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
39.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
39.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
38.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
38.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
38.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
37.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
37.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
37.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
36.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
36.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
36.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
35.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
35.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
34.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
34.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
34.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
33.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
33.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
33.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
33.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
33.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
33.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
33.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
32.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
32.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
32.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
31.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
31.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
30.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
28.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
26.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
25.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX10 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
171.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
144.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
130.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
129.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
116.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
114.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
104.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
104.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
101.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
100.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
99.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
98.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
97.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
97.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
96.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
96.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
95.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
88.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
83.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
83.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
83.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
80.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
80.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
80.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
79.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
77.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
74.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
72.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
72.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
71.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
71.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
71.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
70.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
70.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
69.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
68.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
68.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
68.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
68.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
67.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
67.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
66.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
66.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
66.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
65.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
65.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
65.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
64.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
64.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
64.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
64.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
64.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
63.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
63.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
63.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
63.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
63.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
63.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
62.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
61.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
61.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
60.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
60.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
60.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
59.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
59.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
58.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
58.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
58.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
58.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
58.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
58.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
57.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
57.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
57.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
57.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
57.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
56.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
56.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
56.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
56.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
56.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
56.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
56.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
56.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
56.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
56.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
55.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
55.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
55.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
55.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
55.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
55.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
55.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
54.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
54.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
54.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
54.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
54.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
53.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
53.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
52.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
52.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
52.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
52.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
50.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
50.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
50.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
50.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
50.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
49.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
49.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
49.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
49.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
49.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
48.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
48.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
48.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
48.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
47.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
47.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
47.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
47.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
47.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
47.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
46.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
46.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
46.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
46.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
46.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
46.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
45.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
45.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
45.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
45.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
45.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
44.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
44.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
44.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
44.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
43.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
43.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
43.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
43.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
43.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
43.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
43.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
42.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
42.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
42.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
42.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
42.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
42.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
42.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
42.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
42.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
41.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
41.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
41.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
41.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
41.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
41.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
41.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
41.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
40.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
40.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
40.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
40.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
40.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
40.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
40.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
40.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
40.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
39.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
39.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
39.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
39.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
39.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
39.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
39.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
39.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
39.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
38.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
38.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
38.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
38.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
38.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
38.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
38.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
37.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
37.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
37.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
37.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
37.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
37.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
36.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
35.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
35.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
35.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
35.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
34.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
34.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
34.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
34.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
34.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
34.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
34.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
33.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
33.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
33.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
33.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
33.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
33.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
32.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
32.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
32.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
31.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
31.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
31.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
31.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
31.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
31.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
31.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
31.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
30.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
30.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
30.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
30.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
30.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
29.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
29.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
29.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
28.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
28.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
27.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
27.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
26.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
26.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
25.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
25.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
24.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
24.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
24.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
23.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
23.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
23.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
23.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
22.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
22.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
22.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
21.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
21.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
18.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
18.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
17.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
15.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
13.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086950003
Tumor
0.9
CPT0023350003
Tumor
0.9
CPT0001340003
Tumor
0.7
CPT0076330003
Tumor
0.6
CPT0066470004
Tumor
0.6
CPT0019990003
Tumor
0.6
CPT0001180009
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0011410003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0001220008
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0025050003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0012180003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0082010001
Normal
0.2
CPT0002350011
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0079230003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0026420001
Normal
0.2
CPT0025110003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0089460004
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0001350001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0088630003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0088640003
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0086890003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0010170001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0088920001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0079180003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0077490003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0079380003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0000790001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0000870016
Tumor
-0.3
CPT0019160001
Normal
-0.3
CPT0088550004
Tumor
-0.3
CPT0077140001
Normal
-0.3
CPT0015810003
Tumor
-0.3
CPT0092310003
Normal
-0.4
CPT0006900003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
