We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRMT1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
60.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
43.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
32.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
31.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
30.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
25.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
24.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
23.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
22.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
21.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
21.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
20.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
20.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
19.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
19.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
18.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
17.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
16.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
16.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
16.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
15.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
15.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
15.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
15.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
14.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
14.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
13.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
12.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
12.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
11.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
11.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
8.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
8.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
6.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
2.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRMT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
31.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
28.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
25.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
25.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
24.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
22.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
21.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
21.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
20.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
20.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
20.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
19.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
19.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
19.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
18.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
18.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
18.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
17.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
17.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
16.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
16.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
16.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
16.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
16.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
16.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
15.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
15.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
15.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
15.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
15.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
15.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
14.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
14.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
14.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
14.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
14.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
14.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
13.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
13.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
13.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
13.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
13.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
13.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
13.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
13.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
13.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
13.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
13.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
13.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
13.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
13.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
13.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
13.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
13.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
12.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
12.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
12.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
12.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
12.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
12.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
12.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
12.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
12.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
12.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
12.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
12.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
11.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
11.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
11.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
11.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
11.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
11.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
11.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
11.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
11.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
11.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
10.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
10.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
10.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
10.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
10.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
10.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
10.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
10.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
10.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
10.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
10.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
10.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
10.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
10.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
10.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
10.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
9.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
9.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
9.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
9.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
9.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
9.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
9.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
9.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
9.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
9.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
9.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
9.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
8.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
8.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
8.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
8.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
6.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
6.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
6.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
5.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
5.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
5.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
3.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRMT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
25.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
22.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
21.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
21.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
20.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
20.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
19.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
18.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
18.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
18.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
18.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
17.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
17.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
17.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
17.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
17.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
16.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
15.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
15.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
15.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
14.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
13.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRMT1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
52.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
41.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
39.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
35.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
34.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
33.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
32.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
31.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
31.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
29.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
28.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
28.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
27.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
27.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
26.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
26.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
25.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
24.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
24.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
23.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
23.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
23.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
22.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
22.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
22.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
21.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
21.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
21.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
21.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
20.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
20.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
20.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
20.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
20.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
19.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
19.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
19.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
19.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
19.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
18.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
18.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
18.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
18.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
18.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
18.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
18.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
18.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
18.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
18.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
17.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
17.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
17.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
17.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
17.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
17.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
16.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
16.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
16.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
16.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
16.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
15.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
15.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
15.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
15.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
15.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
15.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
15.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
15.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
15.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
15.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
15.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
14.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
14.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
14.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
14.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
14.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
14.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
14.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
14.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
13.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
13.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
13.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
12.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
12.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
12.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
12.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
12.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
12.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
12.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
11.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
11.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
10.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
10.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
10.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
9.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
9.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
8.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
8.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
7.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
6.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
6.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
6.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
5.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
5.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
4.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
3.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
2.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
2.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
1.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
1.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
1.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.8
CPT0001260009
Tumor
0.6
CPT0078660003
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0079180003
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0019130003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0088690003
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0025580004
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0001180009
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0088500001
Normal
0.3
CPT0089460004
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0066470004
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0081600003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0007870001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0026420001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0087050003
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0088640003
Normal
0.1
CPT0089040001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0069190001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0086890003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0019990003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0001550001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0077310003
Tumor
-0.3
CPT0011410003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0025290003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0007320003
Tumor
-0.4
CPT0078800003
Tumor
-0.4
CPT0088920001
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0065930003
Tumor
-0.4
CPT0007470001
Normal
-0.4
CPT0001230001
Normal
-0.5
CPT0014160003
Tumor
-0.7
CPT0014130001
Normal
-0.7
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
