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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCB1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
221.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
513.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
434.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
421.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
404.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
394.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
389.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
380.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
371.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
357.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
349.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
323.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
307.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
304.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
304.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
290.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
280.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
274.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
273.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
265.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
256.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
254.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
250.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
249.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
238.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
234.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
227.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
226.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
224.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
218.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
208.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
206.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
202.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
199.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
194.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
190.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
189.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
187.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
186.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
180.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
180.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
175.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
172.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
172.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
167.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
160.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
154.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
154.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
148.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
146.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
142.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
138.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
136.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
131.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
130.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
126.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
122.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
121.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
104.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
97.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
91.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
87.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
71.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
41.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCB1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
203.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
438.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
407.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
401.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
393.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
378.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
374.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
370.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
370.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
368.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
367.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
363.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
361.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
360.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
358.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
355.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
352.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
351.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
342.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
342.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
338.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
338.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
336.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
335.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
329.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
322.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
321.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
320.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
317.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
317.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
316.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
316.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
314.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
313.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
313.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
312.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
311.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
310.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
308.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
307.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
307.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
306.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
305.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
304.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
304.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
303.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
302.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
302.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
302.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
301.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
301.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
300.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
300.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
299.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
299.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
298.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
297.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
297.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
296.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
295.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
295.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
294.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
294.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
293.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
293.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
293.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
293.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
293.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
292.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
291.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
289.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
288.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
288.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
287.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
284.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
284.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
283.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
281.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
280.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
280.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
278.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
278.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
278.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
278.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
277.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
277.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
276.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
275.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
274.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
273.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
273.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
271.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
271.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
270.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
269.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
268.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
268.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
266.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
266.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
266.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
265.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
263.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
263.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
262.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
262.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
262.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
262.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
261.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
259.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
259.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
259.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
259.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
258.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
258.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
257.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
257.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
257.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
255.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
255.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
254.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
254.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
254.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
254.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
254.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
253.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
253.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
252.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
251.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
249.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
249.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
248.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
248.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
247.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
247.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
247.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
247.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
246.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
246.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
245.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
245.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
245.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
245.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
244.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
244.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
244.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
244.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
243.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
243.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
243.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
243.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
242.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
241.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
241.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
240.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
239.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
238.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
238.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
238.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
237.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
237.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
236.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
236.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
236.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
236.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
236.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
235.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
235.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
235.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
234.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
234.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
234.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
233.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
232.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
231.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
231.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
231.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
231.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
231.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
231.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
231.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
230.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
230.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
230.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
230.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
230.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
230.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
229.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
228.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
228.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
227.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
227.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
227.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
227.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
227.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
226.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
226.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
225.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
225.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
225.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
225.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
224.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
224.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
223.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
223.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
223.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
223.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
223.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
222.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
222.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
222.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
222.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
221.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
221.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
221.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
221.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
220.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
220.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
220.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
219.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
219.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
219.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
219.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
219.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
218.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
218.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
218.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
217.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
217.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
217.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
217.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
217.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
215.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
215.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
215.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
214.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
213.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
213.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
213.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
213.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
213.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
213.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
213.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
213.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
212.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
212.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
211.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
211.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
211.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
211.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
211.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
211.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
210.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
209.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
209.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
209.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
209.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
208.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
208.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
208.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
208.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
208.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
208.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
207.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
206.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
206.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
205.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
205.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
204.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
204.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
204.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
204.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
203.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
203.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
203.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
202.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
202.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
202.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
201.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
201.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
201.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
201.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
201.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
200.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
200.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
200.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
200.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
200.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
200.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
199.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
199.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
199.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
198.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
198.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
198.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
198.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
197.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
197.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
197.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
197.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
197.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
196.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
196.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
195.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
195.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
195.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
194.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
193.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
193.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
193.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
192.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
192.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
191.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
191.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
190.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
190.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
189.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
189.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
189.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
189.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
188.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
186.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
185.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
185.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
185.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
185.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
184.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
183.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
183.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
183.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
183.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
183.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
182.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
182.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
181.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
179.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
178.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
178.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
178.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
177.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
177.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
176.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
176.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
176.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
174.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
174.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
174.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
173.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
173.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
173.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
172.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
172.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
171.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
171.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
171.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
170.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
170.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
169.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
169.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
169.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
169.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
168.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
168.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
168.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
167.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
167.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
166.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
166.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
164.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
164.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
164.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
164.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
163.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
162.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
162.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
162.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
162.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
162.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
162.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
161.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
161.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
160.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
160.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
160.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
159.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
158.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
158.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
157.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
157.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
156.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
156.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
156.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
156.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
156.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
155.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
155.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
155.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
155.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
154.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
153.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
153.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
152.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
152.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
152.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
152.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
150.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
150.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
150.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
148.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
148.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
145.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
144.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
144.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
143.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
143.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
143.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
142.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
141.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
140.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
140.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
140.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
139.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
138.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
138.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
137.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
135.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
134.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
134.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
133.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
133.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
133.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
132.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
132.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
132.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
130.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
130.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
128.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
127.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
127.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
125.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
125.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
123.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
121.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
121.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
119.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
119.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
118.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
118.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
116.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
116.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
115.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
114.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
114.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
113.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
113.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
113.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
112.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
111.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
111.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
110.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
110.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
108.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
105.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
104.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
104.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
104.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
103.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
102.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
101.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
101.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
99.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
99.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
98.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
96.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
94.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
93.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
93.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
92.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
92.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
92.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
90.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
88.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
88.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
87.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
86.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
83.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
82.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
78.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
77.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
76.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
74.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
73.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
72.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
71.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
69.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
68.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
68.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
66.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
65.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
65.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
65.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
64.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
63.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
60.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
60.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
59.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
58.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
56.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
53.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
51.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
47.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
42.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
39.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
39.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
32.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
31.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
31.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
31.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
31.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
29.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
20.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCB1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
219.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
386.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
368.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
362.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
348.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
348.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
323.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
316.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
301.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
300.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
290.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
284.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
282.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
280.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
279.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
275.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
272.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
271.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
271.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
270.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
267.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
265.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
265.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
262.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
261.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
257.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
255.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
250.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
243.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
242.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
242.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
241.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
238.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
237.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
236.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
235.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
231.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
230.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
229.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
229.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
226.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
225.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
224.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
223.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
221.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
221.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
221.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
221.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
220.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
220.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
217.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
217.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
215.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
214.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
214.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
213.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
212.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
212.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
211.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
210.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
209.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
206.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
206.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
204.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
204.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
203.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
199.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
196.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
195.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
188.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
186.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
186.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
183.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
180.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
179.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
178.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
178.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
175.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
174.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
173.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
173.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
171.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
169.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
165.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
164.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
163.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
163.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
161.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
152.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
151.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
148.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
147.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
145.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
140.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
129.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
129.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
124.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
119.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
118.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCB1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
212.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
724.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
664.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
628.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
620.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
604.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
589.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
534.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
505.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
496.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
484.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
480.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
430.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
393.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
392.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
391.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
387.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
385.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
380.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
377.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
377.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
376.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
375.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
370.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
362.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
360.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
355.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
354.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
353.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
350.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
345.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
342.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
336.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
336.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
336.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
327.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
324.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
320.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
320.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
319.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
319.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
319.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
318.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
316.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
315.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
315.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
311.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
310.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
307.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
306.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
303.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
302.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
300.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
295.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
291.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
291.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
287.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
286.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
285.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
284.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
283.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
278.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
277.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
277.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
275.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
275.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
274.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
272.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
271.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
270.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
270.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
268.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
268.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
267.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
261.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
261.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
261.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
260.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
259.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
259.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
259.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
256.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
255.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
255.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
255.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
253.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
253.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
251.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
250.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
249.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
248.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
247.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
246.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
246.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
245.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
245.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
245.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
242.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
240.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
240.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
239.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
238.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
238.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
238.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
237.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
236.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
235.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
235.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
232.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
231.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
231.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
230.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
230.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
227.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
226.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
224.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
224.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
223.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
223.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
220.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
218.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
218.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
217.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
216.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
215.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
215.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
213.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
211.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
211.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
211.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
210.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
210.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
209.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
207.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
206.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
206.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
205.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
205.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
205.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
204.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
204.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
203.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
203.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
199.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
199.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
198.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
198.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
197.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
197.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
197.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
196.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
196.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
196.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
195.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
195.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
195.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
194.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
193.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
192.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
192.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
191.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
188.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
187.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
186.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
185.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
185.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
183.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
181.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
181.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
181.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
179.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
178.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
177.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
176.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
175.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
174.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
173.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
173.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
172.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
169.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
169.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
169.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
168.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
166.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
165.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
165.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
164.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
163.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
160.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
158.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
158.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
157.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
157.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
156.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
156.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
156.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
154.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
152.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
150.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
150.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
148.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
147.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
145.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
144.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
143.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
142.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
142.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
142.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
140.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
140.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
139.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
138.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
137.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
137.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
137.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
136.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
136.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
130.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
130.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
129.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
127.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
127.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
123.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
119.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
119.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
116.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
115.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
115.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
113.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
113.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
113.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
112.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
111.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
110.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
103.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
102.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
101.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
99.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
98.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
98.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
96.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
95.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
95.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
92.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
91.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
85.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
83.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
81.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
78.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
74.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
70.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
70.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
70.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
69.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
66.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
64.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
63.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
61.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
61.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
61.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
59.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
59.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
58.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
56.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
54.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
49.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
48.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
45.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
44.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
37.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
35.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
32.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
30.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
29.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
28.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
27.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
26.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
25.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
20.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
15.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
14.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
0.9
CPT0086950003
Tumor
0.9
CPT0086820003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0079270003
Tumor
0.6
CPT0012900004
Tumor
0.6
CPT0025110003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0007320003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0063630003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0025060001
Normal
0.3
CPT0075130003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0017410003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0084590001
Normal
0.2
CPT0092160003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0001500009
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0023360001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0006730001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0078510003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0013790003
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0012570003
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0085670003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0066520001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0092310003
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0065450001
Normal
0.0
CPT0063320003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0000870016
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0088760003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0079180003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.