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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCB1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
162.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
624.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
505.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
469.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
426.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
419.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
391.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
381.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
370.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
335.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
333.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
331.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
330.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
330.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
329.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
320.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
315.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
309.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
299.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
297.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
297.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
290.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
284.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
283.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
281.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
281.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
280.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
280.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
279.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
274.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
272.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
269.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
267.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
267.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
266.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
265.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
265.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
262.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
261.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
261.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
258.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
258.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
257.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
257.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
256.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
255.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
253.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
251.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
251.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
251.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
250.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
248.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
248.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
246.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
246.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
245.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
245.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
240.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
239.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
237.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
236.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
235.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
233.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
233.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
230.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
230.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
229.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
228.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
228.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
228.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
226.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
226.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
224.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
224.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
223.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
223.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
222.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
221.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
220.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
219.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
219.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
219.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
217.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
216.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
216.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
215.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
214.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
214.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
211.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
210.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
210.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
210.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
208.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
207.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
205.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
205.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
205.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
205.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
205.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
205.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
204.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
204.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
204.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
204.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
203.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
202.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
202.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
200.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
200.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
200.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
199.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
198.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
197.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
196.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
196.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
195.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
193.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
192.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
192.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
192.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
191.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
191.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
191.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
190.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
190.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
190.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
189.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
189.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
183.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
182.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
182.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
180.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
179.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
179.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
178.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
177.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
176.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
175.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
175.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
175.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
174.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
173.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
173.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
173.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
173.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
172.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
172.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
171.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
170.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
170.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
169.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
169.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
169.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
169.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
168.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
168.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
168.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
168.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
167.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
167.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
166.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
166.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
166.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
165.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
165.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
163.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
163.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
162.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
162.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
161.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
161.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
159.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
159.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
158.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
158.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
158.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
157.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
157.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
156.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
156.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
155.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
155.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
154.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
153.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
153.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
152.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
152.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
150.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
150.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
149.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
149.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
148.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
148.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
146.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
146.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
145.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
145.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
144.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
144.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
143.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
143.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
143.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
142.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
142.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
142.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
142.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
141.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
140.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
140.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
140.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
139.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
139.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
139.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
139.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
139.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
138.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
138.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
138.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
138.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
135.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
135.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
134.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
134.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
132.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
132.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
132.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
131.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
131.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
131.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
131.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
129.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
128.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
128.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
128.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
127.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
127.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
127.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
126.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
125.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
125.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
125.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
124.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
124.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
121.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
119.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
119.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
118.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
118.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
117.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
116.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
115.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
115.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
115.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
115.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
114.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
114.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
112.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
110.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
110.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
110.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
109.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
109.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
109.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
109.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
108.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
107.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
107.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
106.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
106.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
106.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
105.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
104.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
104.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
103.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
102.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
102.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
100.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
100.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
100.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
99.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
99.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
99.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
99.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
99.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
98.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
98.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
98.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
97.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
97.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
97.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
96.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
95.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
94.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
94.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
93.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
91.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
91.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
90.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
90.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
88.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
87.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
86.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
86.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
86.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
85.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
83.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
83.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
82.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
81.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
81.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
81.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
81.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
80.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
78.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
77.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
75.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
75.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
73.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
69.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
68.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
68.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
67.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
66.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
66.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
65.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
64.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
64.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
63.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
63.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
60.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
58.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
57.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
55.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
54.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
48.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
47.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
47.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
44.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
43.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
43.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
40.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
39.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
37.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
36.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
34.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
32.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
31.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
29.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
28.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
27.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
27.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
24.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
24.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
21.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
20.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
18.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
16.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
15.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
13.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
12.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
11.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUCB1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
143.3
Number of samples
231
Samples
Sample
Description
TPM
DO50829
0 years, male, NA, stage:3, alive, 570 days
372.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
350.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
330.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
314.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
313.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
311.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
300.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
298.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
290.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
285.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
282.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
280.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
277.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
267.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
266.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
263.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
261.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
256.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
249.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
249.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
246.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
237.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
229.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
223.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
219.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
214.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
214.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
209.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
208.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
207.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
205.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
203.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
196.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
195.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
193.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
192.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
190.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
189.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
186.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
184.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
180.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
178.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
176.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
175.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
175.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
175.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
173.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
172.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
170.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
170.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
168.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
167.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
166.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
166.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
165.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
165.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
164.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
164.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
164.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
162.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
162.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
161.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
161.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
161.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
160.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
160.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
159.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
158.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
158.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
157.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
154.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
154.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
154.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
153.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
153.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
152.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
150.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
150.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
149.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
149.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
148.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
147.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
147.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
147.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
146.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
146.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
145.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
144.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
144.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
144.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
143.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
143.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
143.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
143.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
141.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
141.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
141.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
139.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
139.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
138.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
138.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
138.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
137.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
136.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
135.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
135.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
134.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
133.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
132.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
130.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
130.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
129.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
129.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
129.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
128.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
128.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
128.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
127.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
127.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
127.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
126.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
126.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
126.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
125.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
125.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
125.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
124.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
124.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
124.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
123.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
123.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
123.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
121.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
121.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
121.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
120.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
120.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
119.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
118.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
118.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
118.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
118.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
118.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
117.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
116.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
116.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
116.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
115.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
115.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
115.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
114.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
113.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
113.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
112.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
112.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
112.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
112.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
111.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
111.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
111.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
111.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
111.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
110.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
110.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
109.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
108.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
108.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
107.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
107.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
106.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
105.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
105.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
104.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
104.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
103.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
103.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
102.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
102.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
101.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
100.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
99.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
98.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
98.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
97.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
96.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
96.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
96.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
95.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
95.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
95.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
94.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
94.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
93.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
93.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
92.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
92.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
92.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
90.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
89.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
88.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
88.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
88.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
88.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
88.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
88.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
87.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
87.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
83.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
82.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
82.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
81.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
77.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
77.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
77.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
75.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
75.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
75.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
75.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
74.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
73.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
72.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
70.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
69.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
68.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
67.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
67.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
62.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
62.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
62.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
53.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
47.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
635
Tumor
1.2
553
Tumor
1.0
1025
Tumor
0.9
911
Tumor
0.8
857
Tumor
0.8
867
Tumor
0.8
227
Tumor
0.8
913
Tumor
0.8
557
Tumor
0.8
1045
Tumor
0.7
533
Tumor
0.7
937
Tumor
0.7
1021
Tumor
0.7
615
Tumor
0.7
195
Tumor
0.6
975
Tumor
0.6
145
Tumor
0.6
963
Tumor
0.6
353
Tumor
0.6
435
Tumor
0.5
221
Tumor
0.5
817
Tumor
0.5
471
Tumor
0.5
863
Tumor
0.5
127
Tumor
0.5
231
Tumor
0.4
497
Tumor
0.4
861
Tumor
0.4
514
Normal
0.4
696
Normal
0.4
641
Tumor
0.4
433
Tumor
0.4
526
Normal
0.4
823
Tumor
0.4
261
Tumor
0.4
873
Tumor
0.4
481
Tumor
0.4
527
Tumor
0.4
218
Normal
0.4
981
Tumor
0.4
745
Tumor
0.4
217
Tumor
0.4
473
Tumor
0.4
257
Tumor
0.4
421
Tumor
0.4
721
Tumor
0.3
1043
Tumor
0.3
395
Tumor
0.3
1044
Normal
0.3
515
Tumor
0.3
431
Tumor
0.3
524
Normal
0.3
968
Normal
0.3
1041
Tumor
0.3
755
Tumor
0.3
558
Normal
0.3
697
Tumor
0.3
714
Normal
0.3
713
Tumor
0.3
232
Normal
0.3
327
Tumor
0.3
984
Normal
0.3
427
Tumor
0.3
392
Normal
0.2
778
Normal
0.2
741
Tumor
0.2
922
Normal
0.2
728
Normal
0.2
534
Normal
0.2
484
Normal
0.2
483
Tumor
0.2
686
Normal
0.2
883
Tumor
0.2
868
Normal
0.2
267
Tumor
0.2
492
Normal
0.2
112
Tumor
0.2
698
Normal
0.2
925
Tumor
0.2
518
Normal
0.2
967
Tumor
0.2
536
Normal
0.2
1026
Normal
0.2
554
Normal
0.2
277
Tumor
0.2
722
Normal
0.2
926
Normal
0.2
976
Normal
0.2
1022
Normal
0.2
363
Tumor
0.2
412
Normal
0.2
944
Normal
0.2
528
Normal
0.2
498
Normal
0.2
738
Normal
0.2
982
Normal
0.2
494
Normal
0.2
361
Tumor
0.2
516
Normal
0.2
1014
Normal
0.2
493
Tumor
0.2
488
Normal
0.2
864
Normal
0.2
813
Tumor
0.2
467
Tumor
0.2
924
Normal
0.1
977
Tumor
0.1
571
Tumor
0.1
356
Normal
0.1
452
Normal
0.1
918
Normal
0.1
952
Normal
0.1
715
Tumor
0.1
228
Normal
0.1
212
Normal
0.1
448
Normal
0.1
814
Normal
0.1
964
Normal
0.1
285
Tumor
0.1
723
Tumor
0.1
468
Normal
0.1
474
Normal
0.1
978
Normal
0.1
955
Tumor
0.1
525
Tumor
0.1
958
Normal
0.1
262
Normal
0.1
572
Normal
0.1
131
Tumor
0.1
966
Normal
0.1
546
Normal
0.1
716
Normal
0.1
447
Tumor
0.1
743
Tumor
0.1
1042
Normal
0.1
914
Normal
0.1
135
Tumor
0.1
271
Tumor
0.1
685
Tumor
0.1
816
Normal
0.1
423
Tumor
0.1
881
Tumor
0.1
517
Tumor
0.1
627
Tumor
0.1
858
Normal
0.1
884
Normal
0.1
1016
Normal
0.1
1031
Tumor
0.1
636
Normal
0.1
1046
Normal
0.1
882
Normal
0.1
113
Tumor
0.1
665
Tumor
0.1
191
Tumor
0.1
387
Tumor
0.1
445
Tumor
0.1
1028
Normal
0.0
141
Tumor
0.0
368
Normal
0.0
617
Tumor
0.0
142
Normal
0.0
124
Normal
0.0
482
Normal
0.0
478
Normal
0.0
1032
Normal
0.0
425
Tumor
0.0
756
Normal
0.0
916
Normal
0.0
114
Normal
0.0
443
Tumor
0.0
938
Normal
0.0
672
Normal
0.0
136
Normal
0.0
662
Normal
0.0
912
Normal
0.0
328
Normal
0.0
648
Normal
0.0
564
Normal
0.0
376
Normal
0.0
786
Normal
0.0
746
Normal
0.0
563
Tumor
0.0
451
Tumor
0.0
462
Normal
0.0
362
Normal
0.0
956
Normal
0.0
415
Tumor
0.0
196
Normal
0.0
436
Normal
0.0
214
Normal
0.0
852
Normal
0.0
461
Tumor
0.0
222
Normal
0.0
386
Normal
0.0
878
Normal
0.0
866
Normal
0.0
187
Tumor
0.0
224
Normal
0.0
573
Tumor
0.0
664
Normal
0.0
472
Normal
0.0
132
Normal
0.0
616
Normal
0.0
921
Tumor
0.0
466
Normal
0.0
874
Normal
0.0
185
Tumor
0.0
422
Normal
0.0
1015
Tumor
0.0
332
Normal
0.0
456
Normal
0.0
954
Normal
-0.1
223
Tumor
-0.1
357
Tumor
-0.1
568
Normal
-0.1
411
Tumor
-0.1
642
Normal
-0.1
138
Normal
-0.1
162
Normal
-0.1
455
Tumor
-0.1
915
Tumor
-0.1
213
Tumor
-0.1
284
Normal
-0.1
147
Tumor
-0.1
365
Tumor
-0.1
298
Normal
-0.1
785
Tumor
-0.1
286
Normal
-0.1
344
Normal
-0.1
538
Normal
-0.1
824
Normal
-0.1
426
Normal
-0.1
666
Normal
-0.1
148
Normal
-0.1
513
Tumor
-0.1
742
Normal
-0.1
396
Normal
-0.1
414
Normal
-0.1
477
Tumor
-0.1
358
Normal
-0.1
111
Normal
-0.1
394
Normal
-0.1
464
Normal
-0.1
434
Normal
-0.1
366
Normal
-0.1
342
Normal
-0.1
258
Normal
-0.1
268
Normal
-0.1
364
Normal
-0.1
1027
Tumor
-0.1
432
Normal
-0.1
444
Normal
-0.1
424
Normal
-0.1
953
Tumor
-0.1
695
Tumor
-0.1
818
Normal
-0.1
354
Normal
-0.1
923
Tumor
-0.1
128
Normal
-0.1
314
Normal
-0.2
446
Normal
-0.2
278
Normal
-0.2
312
Normal
-0.2
352
Normal
-0.2
671
Tumor
-0.2
862
Normal
-0.2
523
Tumor
-0.2
137
Tumor
-0.2
951
Tumor
-0.2
126
Normal
-0.2
331
Tumor
-0.2
416
Normal
-0.2
393
Tumor
-0.2
917
Tumor
-0.2
188
Normal
-0.2
877
Tumor
-0.2
192
Normal
-0.2
384
Normal
-0.2
628
Normal
-0.2
618
Normal
-0.2
428
Normal
-0.2
647
Tumor
-0.2
125
Tumor
-0.2
463
Tumor
-0.2
574
Normal
-0.2
297
Tumor
-0.2
172
Normal
-0.2
383
Tumor
-0.2
186
Normal
-0.2
388
Normal
-0.2
272
Normal
-0.3
146
Normal
-0.3
545
Tumor
-0.3
567
Tumor
-0.3
965
Tumor
-0.3
355
Tumor
-0.3
161
Tumor
-0.3
957
Tumor
-0.3
744
Normal
-0.3
727
Tumor
-0.3
491
Tumor
-0.3
375
Tumor
-0.3
1013
Tumor
-0.4
661
Tumor
-0.4
851
Tumor
-0.4
171
Tumor
-0.4
663
Tumor
-0.4
211
Tumor
-0.4
983
Tumor
-0.4
537
Tumor
-0.4
777
Tumor
-0.4
385
Tumor
-0.4
865
Tumor
-0.4
487
Tumor
-0.4
341
Tumor
-0.5
737
Tumor
-0.5
283
Tumor
-0.5
343
Tumor
-0.6
535
Tumor
-0.6
943
Tumor
-0.6
465
Tumor
-0.6
724
Normal
-0.6
391
Tumor
-0.6
313
Tumor
-0.6
351
Tumor
-0.6
123
Tumor
-0.6
413
Tumor
-0.7
815
Tumor
-0.7
311
Tumor
-0.7
367
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.